Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00854
(776 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 109 1e-23
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 109 1e-23
AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetic... 109 1e-23
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 109 1e-23
BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding p... 107 3e-23
AY094971-1|AAM15733.1| 354|Homo sapiens cellular retinaldehyde-... 107 3e-23
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 95 3e-19
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 95 3e-19
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 95 3e-19
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 65 3e-10
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 65 3e-10
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 65 3e-10
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 58 4e-08
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 58 4e-08
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 58 4e-08
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 49 2e-05
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 49 2e-05
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 38 0.040
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 38 0.040
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 38 0.040
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 38 0.053
AY349356-1|AAQ56720.1| 227|Homo sapiens unknown protein. 31 6.1
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 109 bits (261), Expect = 1e-23
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 8 QANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAV 187
Q NG+V+I+DW+ FTFKQ+ L +L++ I+ LQD P RF IHF+ QPWY+ V
Sbjct: 154 QVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTV 213
Query: 188 IKPYLKAKTRERIVLHGNNLST 253
I+P+LK KTR+RI LHGNNL++
Sbjct: 214 IRPFLKEKTRKRIFLHGNNLNS 235
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 109 bits (261), Expect = 1e-23
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 8 QANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAV 187
Q NG+V+I+DW+ FTFKQ+ L +L++ I+ LQD P RF IHF+ QPWY+ V
Sbjct: 154 QVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTV 213
Query: 188 IKPYLKAKTRERIVLHGNNLST 253
I+P+LK KTR+RI LHGNNL++
Sbjct: 214 IRPFLKEKTRKRIFLHGNNLNS 235
>AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 181
Score = 109 bits (261), Expect = 1e-23
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 8 QANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAV 187
Q NG+V+I+DW+ FTFKQ+ L +L++ I+ LQD P RF IHF+ QPWY+ V
Sbjct: 8 QVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTV 67
Query: 188 IKPYLKAKTRERIVLHGNNLST 253
I+P+LK KTR+RI LHGNNL++
Sbjct: 68 IRPFLKEKTRKRIFLHGNNLNS 89
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 109 bits (261), Expect = 1e-23
Identities = 44/82 (53%), Positives = 60/82 (73%)
Frame = +2
Query: 8 QANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAV 187
Q NG+V+I+DW+ FTFKQ+ L +L++ I+ LQD P RF IHF+ QPWY+ V
Sbjct: 154 QVNGFVLIIDWSNFTFKQASKLTPSMLRLAIEGLQDSFPARFGGIHFVNQPWYIHALYTV 213
Query: 188 IKPYLKAKTRERIVLHGNNLST 253
I+P+LK KTR+RI LHGNNL++
Sbjct: 214 IRPFLKEKTRKRIFLHGNNLNS 235
>BC042617-1|AAH42617.1| 354|Homo sapiens retinaldehyde binding
protein 1-like 1 protein.
Length = 354
Score = 107 bits (258), Expect = 3e-23
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = +2
Query: 8 QANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAV 187
Q NG+++I+DW+ F+FKQ+ L +LK+ I+ LQD P RF +HF+ QPWY+ +
Sbjct: 176 QINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTL 235
Query: 188 IKPYLKAKTRERIVLHGNNLST 253
IKP+LK KTR+RI LHGNNL++
Sbjct: 236 IKPFLKDKTRKRIFLHGNNLNS 257
>AY094971-1|AAM15733.1| 354|Homo sapiens cellular
retinaldehyde-binding protein-like protein protein.
Length = 354
Score = 107 bits (258), Expect = 3e-23
Identities = 42/82 (51%), Positives = 60/82 (73%)
Frame = +2
Query: 8 QANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAV 187
Q NG+++I+DW+ F+FKQ+ L +LK+ I+ LQD P RF +HF+ QPWY+ +
Sbjct: 176 QINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFVNQPWYIHALYTL 235
Query: 188 IKPYLKAKTRERIVLHGNNLST 253
IKP+LK KTR+RI LHGNNL++
Sbjct: 236 IKPFLKDKTRKRIFLHGNNLNS 257
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 95.1 bits (226), Expect = 3e-19
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG+ II ++ FT +Q+ SL+ L+ M+D LQD P RFK+IHFI QPWY T
Sbjct: 192 ETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTY 251
Query: 182 AVIKPYLKAKTRERIVLHGNNLS 250
V+KP+LK+K ER+ +HG++LS
Sbjct: 252 NVVKPFLKSKLLERVFVHGDDLS 274
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 95.1 bits (226), Expect = 3e-19
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG+ II ++ FT +Q+ SL+ L+ M+D LQD P RFK+IHFI QPWY T
Sbjct: 192 ETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTY 251
Query: 182 AVIKPYLKAKTRERIVLHGNNLS 250
V+KP+LK+K ER+ +HG++LS
Sbjct: 252 NVVKPFLKSKLLERVFVHGDDLS 274
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 95.1 bits (226), Expect = 3e-19
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG+ II ++ FT +Q+ SL+ L+ M+D LQD P RFK+IHFI QPWY T
Sbjct: 192 ETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPARFKAIHFIHQPWYFTTTY 251
Query: 182 AVIKPYLKAKTRERIVLHGNNLS 250
V+KP+LK+K ER+ +HG++LS
Sbjct: 252 NVVKPFLKSKLLERVFVHGDDLS 274
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 64.9 bits (151), Expect = 3e-10
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG VI+ D+ + ++ + K +I LQD P+R K++H + +P +
Sbjct: 177 ETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIF 236
Query: 182 AVIKPYLKAKTRERIVLHGNNLST 253
A+IKP+LK K R LHG++L++
Sbjct: 237 AIIKPFLKEKIANRFFLHGSDLNS 260
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 64.9 bits (151), Expect = 3e-10
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG VI+ D+ + ++ + K +I LQD P+R K++H + +P +
Sbjct: 177 ETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIF 236
Query: 182 AVIKPYLKAKTRERIVLHGNNLST 253
A+IKP+LK K R LHG++L++
Sbjct: 237 AIIKPFLKEKIANRFFLHGSDLNS 260
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 64.9 bits (151), Expect = 3e-10
Identities = 28/84 (33%), Positives = 48/84 (57%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG VI+ D+ + ++ + K +I LQD P+R K++H + +P +
Sbjct: 177 ETQVNGIVILADYKGVSLSKASHFGPFIAKKVIGILQDGFPIRIKAVHVVNEPRIFKGIF 236
Query: 182 AVIKPYLKAKTRERIVLHGNNLST 253
A+IKP+LK K R LHG++L++
Sbjct: 237 AIIKPFLKEKIANRFFLHGSDLNS 260
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG I D + F + + V K + L D P++ + IH I +P
Sbjct: 148 ETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVF 207
Query: 182 AVIKPYLKAKTRERIVLHGNN 244
++IKP+L K +ERI +HGNN
Sbjct: 208 SMIKPFLTEKIKERIHMHGNN 228
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG I D + F + + V K + L D P++ + IH I +P
Sbjct: 148 ETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVF 207
Query: 182 AVIKPYLKAKTRERIVLHGNN 244
++IKP+L K +ERI +HGNN
Sbjct: 208 SMIKPFLTEKIKERIHMHGNN 228
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 58.0 bits (134), Expect = 4e-08
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG I D + F + + V K + L D P++ + IH I +P
Sbjct: 148 ETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVF 207
Query: 182 AVIKPYLKAKTRERIVLHGNN 244
++IKP+L K +ERI +HGNN
Sbjct: 208 SMIKPFLTEKIKERIHMHGNN 228
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 110 QDCMPVRFKSIHFIGQPWYVETALAVIKPYLKAKTRERIVLHGNNLST 253
QD P+R K++H + +P + A+IKP+LK K R LHG++L++
Sbjct: 179 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNS 226
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 110 QDCMPVRFKSIHFIGQPWYVETALAVIKPYLKAKTRERIVLHGNNLST 253
QD P+R K++H + +P + A+IKP+LK K R LHG++L++
Sbjct: 179 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNS 226
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 37.9 bits (84), Expect = 0.040
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG V I D + + + + K +++ L+ P R K + +G P +
Sbjct: 143 ETQRNGLVFIYDMCGSNY---ANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPY 199
Query: 182 AVIKPYLKAKTRERI 226
++I LK K RERI
Sbjct: 200 SIISLLLKDKVRERI 214
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 37.9 bits (84), Expect = 0.040
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG V I D + + + + K +++ L+ P R K + +G P +
Sbjct: 143 ETQRNGLVFIYDMCGSNY---ANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPY 199
Query: 182 AVIKPYLKAKTRERI 226
++I LK K RERI
Sbjct: 200 SIISLLLKDKVRERI 214
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 37.9 bits (84), Expect = 0.040
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG V I D + + + + K +++ L+ P R K + +G P +
Sbjct: 143 ETQRNGLVFIYDMCGSNY---ANFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPY 199
Query: 182 AVIKPYLKAKTRERI 226
++I LK K RERI
Sbjct: 200 SIISLLLKDKVRERI 214
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.053
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +2
Query: 2 QNQANGYVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETAL 181
+ Q NG V I D + + + K +++ L+ P R K + +G P +
Sbjct: 133 ETQRNGLVFIYDMCGSNY---ADFELDLGKKVLNLLKGAFPARLKKVLIVGAPIWFRVPY 189
Query: 182 AVIKPYLKAKTRERI 226
++I LK K RERI
Sbjct: 190 SIISLLLKDKVRERI 204
>AY349356-1|AAQ56720.1| 227|Homo sapiens unknown protein.
Length = 227
Score = 30.7 bits (66), Expect = 6.1
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 12/63 (19%)
Frame = +2
Query: 74 QAKVLKMMIDCLQDCMPVR-----FKSIHFI-----GQPWYVETALAVIK--PYLKAKTR 217
Q K +K ++ C Q+ +P+R FK ++ QP ++E+A +IK P+LK K
Sbjct: 67 QLKFVKKLVQCYQNGLPLRDLAQIFKILNLCSGKIKNQPRFIESAYDIIKLLPFLKRKVS 126
Query: 218 ERI 226
+ I
Sbjct: 127 DEI 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,894,366
Number of Sequences: 237096
Number of extensions: 2447019
Number of successful extensions: 4700
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4692
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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