Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00854
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80453-11|AAN63452.2|  503|Caenorhabditis elegans Hypothetical p...    30   2.1  
U80453-10|AAN63453.1|  489|Caenorhabditis elegans Hypothetical p...    30   2.1  
U80453-9|AAT81206.1|  432|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z69793-4|CAA93675.3|  382|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>U80453-11|AAN63452.2|  503|Caenorhabditis elegans Hypothetical
           protein C23H3.9a protein.
          Length = 503

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 334 QEFCRSENIPPTLTTPVTAITVEDDLPSAN*TKPIYKRTVPT 459
           QE   S    PT TT  T  T    LP+   T+P    T PT
Sbjct: 201 QETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPT 242


>U80453-10|AAN63453.1|  489|Caenorhabditis elegans Hypothetical
           protein C23H3.9b protein.
          Length = 489

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 334 QEFCRSENIPPTLTTPVTAITVEDDLPSAN*TKPIYKRTVPT 459
           QE   S    PT TT  T  T    LP+   T+P    T PT
Sbjct: 197 QETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPT 238


>U80453-9|AAT81206.1|  432|Caenorhabditis elegans Hypothetical
           protein C23H3.9d protein.
          Length = 432

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/42 (38%), Positives = 18/42 (42%)
 Frame = +1

Query: 334 QEFCRSENIPPTLTTPVTAITVEDDLPSAN*TKPIYKRTVPT 459
           QE   S    PT TT  T  T    LP+   T+P    T PT
Sbjct: 140 QETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTTTTTEPT 181


>U55373-9|AAV58870.1|  648|Caenorhabditis elegans Hypothetical
           protein F26F12.3c protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = -3

Query: 396 CYSC--HWCCKCRR 361
           CYSC  HWC KC R
Sbjct: 409 CYSCGIHWCPKCER 422


>U55373-8|AAD34666.1|  805|Caenorhabditis elegans Hypothetical
           protein F26F12.3b protein.
          Length = 805

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = -3

Query: 396 CYSC--HWCCKCRR 361
           CYSC  HWC KC R
Sbjct: 566 CYSCGIHWCPKCER 579


>U55373-7|AAC25890.2|  890|Caenorhabditis elegans Hypothetical
           protein F26F12.3a protein.
          Length = 890

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = -3

Query: 396 CYSC--HWCCKCRR 361
           CYSC  HWC KC R
Sbjct: 651 CYSCGIHWCPKCER 664


>Z69793-4|CAA93675.3|  382|Caenorhabditis elegans Hypothetical
           protein R03A10.5 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
 Frame = +2

Query: 20  YVIIVDWTEFTFKQSCSLQAKVLKMMIDCLQDCMPVRFKSIHFIGQPWYVETALAVIKPY 199
           YV+ +   ++  K+   L    +K + D + D      K    +  P +      V++P 
Sbjct: 152 YVMDITGLQYN-KKLYDLVTGSMKSLADFMADHYVEMIKYFVPVCVPSFATALYVVVRPL 210

Query: 200 LKAKTRERIVLHG-NNLSTPMTLYLLISYRPNLEAKVRH 313
           L  KTRE++ L G  N    +  Y + S  P++     H
Sbjct: 211 LPEKTREKVRLIGETNWRDDVLQYAIHSSLPSIWNNENH 249


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,973,319
Number of Sequences: 27780
Number of extensions: 381682
Number of successful extensions: 957
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)