Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00853
         (692 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EB2908 Cluster: UPI0000EB2908 related cluster; n...    33   8.8  
UniRef50_Q5TUJ1 Cluster: ENSANGP00000026074; n=4; Endopterygota|...    33   8.8  

>UniRef50_UPI0000EB2908 Cluster: UPI0000EB2908 related cluster; n=1;
            Canis lupus familiaris|Rep: UPI0000EB2908 UniRef100 entry
            - Canis familiaris
          Length = 3509

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 12   SRGVPASGA*GSSQETRQRGGQREKETQETVFGAGRHQNRTRRLGH 149
            +RG P S    S   TR+R G R +++ +    AG HQ +    GH
Sbjct: 1283 TRGHPDSAHRDSGSSTRERQGSRHEQSGDRARHAGSHQGQQATRGH 1328



 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 12   SRGVPASGA*GSSQETRQRGGQREKETQETVFGAGRHQNRTRRLGH 149
            +RG P S    S   TR+R G R +++ +    AG HQ +    GH
Sbjct: 1325 TRGHPDSAHRDSESSTRERQGSRHEQSGDRARHAGSHQGQQATRGH 1370



 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 12   SRGVPASGA*GSSQETRQRGGQREKETQETVFGAGRHQNRTRRLGH 149
            +RG P S    S   TR+R G R +++ +    AG HQ +    GH
Sbjct: 1811 TRGHPDSAHRDSGSSTRERQGSRHEQSGDRARHAGSHQGQQATRGH 1856


>UniRef50_Q5TUJ1 Cluster: ENSANGP00000026074; n=4;
           Endopterygota|Rep: ENSANGP00000026074 - Anopheles
           gambiae str. PEST
          Length = 521

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
 Frame = -2

Query: 589 RYNLQSVGTFPDGLTMPTV-DYSIIQS----RFNIMMMNGLFIMVFCNILGVFKNYTFNF 425
           +Y+++++GT P GL  PT+ D+S++ S     F + M+     +    I    +NY   F
Sbjct: 270 KYSIKTIGTIPTGLPAPTLPDFSLMPSILIDSFPVAMVGYTVSVSMALIFAKKENYEIGF 329

Query: 424 DESL 413
           ++ L
Sbjct: 330 NQEL 333


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,934,717
Number of Sequences: 1657284
Number of extensions: 13178835
Number of successful extensions: 31883
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31873
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)