Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00853
(692 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 25 0.78
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 4.1
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.5
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 7.2
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 21 7.2
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 21 7.2
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 24.6 bits (51), Expect = 0.78
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3
Query: 483 YL*WSFVIFWVFLKTIHLTLMNL*RSLLVQFCCAHTNITAGVSFLLTL-FVYC 328
Y ++F++F V L + LL FCCA T + FLL + + YC
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYFYYMHLL--FCCAFIIFTMHLLFLLCIYYFYC 290
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.1
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -2
Query: 556 DGLTMPTVDYSIIQSRFNIMMMNGLFIMVFCNILGVFK--NYTFNFDESLAFFVSTVLLC 383
D ++MP + Y I+ I+ +F+M+ + F+ N+T +F ++ + +L+C
Sbjct: 903 DNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWT-SFYYNIIPILFFMLVC 961
Query: 382 -THKHN 368
T K N
Sbjct: 962 FTCKSN 967
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.1
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -2
Query: 556 DGLTMPTVDYSIIQSRFNIMMMNGLFIMVFCNILGVFK--NYTFNFDESLAFFVSTVLLC 383
D ++MP + Y I+ I+ +F+M+ + F+ N+T +F ++ + +L+C
Sbjct: 903 DNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWT-SFYYNIIPILFFMLVC 961
Query: 382 -THKHN 368
T K N
Sbjct: 962 FTCKSN 967
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 517 QSRFNIMMMNGLFIMVFCNILGVFKNY 437
QS F MMN LF+++ +L + K+Y
Sbjct: 1267 QSVFAFFMMNALFVLIVF-LLTLKKDY 1292
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.1
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -2
Query: 556 DGLTMPTVDYSIIQSRFNIMMMNGLFIMVFCNILGVFK--NYTFNFDESLAFFVSTVLLC 383
D ++MP + Y I+ I+ +F+M+ + F+ N+T +F ++ + +L+C
Sbjct: 903 DNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWT-SFYYNIIPILFFMLVC 961
Query: 382 -THKHN 368
T K N
Sbjct: 962 FTCKSN 967
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 4.1
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -2
Query: 556 DGLTMPTVDYSIIQSRFNIMMMNGLFIMVFCNILGVFK--NYTFNFDESLAFFVSTVLLC 383
D ++MP + Y I+ I+ +F+M+ + F+ N+T +F ++ + +L+C
Sbjct: 903 DNISMPYIGYQILLMGGTILGPGTIFLMLVGAFVAAFQIDNWT-SFYYNIIPILFFMLVC 961
Query: 382 -THKHN 368
T K N
Sbjct: 962 FTCKSN 967
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 517 QSRFNIMMMNGLFIMVFCNILGVFKNY 437
QS F MMN LF+++ +L + K+Y
Sbjct: 1267 QSVFAFFMMNALFVLIVF-LLTLKKDY 1292
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 9 HSRGVPASGA*GSSQETRQRG 71
H +GVP++G + + T+Q G
Sbjct: 882 HDQGVPSAGPGEAGEYTKQPG 902
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 586 YNLQSVGTFPDGLTMPTVDY 527
Y+L ++GT D +++ T DY
Sbjct: 817 YDLPALGTVLDFMSVMTYDY 836
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.4 bits (43), Expect = 7.2
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = -2
Query: 478 IMVFCN--ILGVFKNYTFNFDESLAFFV 401
I +F N ILGVF + F FFV
Sbjct: 122 ISIFVNLAILGVFGEFVLVFVPDYVFFV 149
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -2
Query: 481 FIMVFCNILGVFKNYTFNFDES 416
F CNI G+ Y+F +S
Sbjct: 16 FFYKICNIFGIVPPYSFEKPDS 37
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -2
Query: 481 FIMVFCNILGVFKNYTFNFDES 416
F CNI G+ Y+F +S
Sbjct: 16 FFYKICNIFGIVPPYSFEKPDS 37
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,544
Number of Sequences: 336
Number of extensions: 3622
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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