Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00853
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    30   1.8  
Z72509-1|CAA96645.1|  339|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z70212-7|CAA94167.1|  332|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z68116-11|CAA92176.1|  317|Caenorhabditis elegans Hypothetical p...    29   4.2  
Z68114-12|CAA92163.1|  317|Caenorhabditis elegans Hypothetical p...    29   4.2  
U42437-2|AAW88401.1|  294|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL034364-4|CAA22250.2|  290|Caenorhabditis elegans Hypothetical ...    29   4.2  
Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z30662-1|CAA83137.1|  344|Caenorhabditis elegans Hypothetical pr...    28   5.5  
X89080-1|CAA61451.1|  113|Caenorhabditis elegans dad-1 protein.        28   5.5  
AF039713-4|AAB96727.1|  113|Caenorhabditis elegans Dad (defender...    28   5.5  
AC006807-6|AAK84620.2|  230|Caenorhabditis elegans Hypothetical ...    28   7.3  
AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical ...    27   9.6  

>U41263-5|AAC24427.1|  400|Caenorhabditis elegans Hypothetical
           protein T19D12.7 protein.
          Length = 400

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 436 TFNFDESLAFFVSTVLLCTHKHNGWSFFSFNSVCLLRYTI 317
           TF+  ES+ F V++V L TH     +F+SF+S C   + I
Sbjct: 12  TFSLLESI-FVVASVFLSTHIFYSSAFYSFSSFCYSGFRI 50


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 530  INGGHCEPIWESTDALQVVTMLSC 601
            +NGGHC   W +TD     T   C
Sbjct: 1167 LNGGHCSVAWANTDPSAATTTCDC 1190


>Z72509-1|CAA96645.1|  339|Caenorhabditis elegans Hypothetical
           protein F32G8.1 protein.
          Length = 339

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 523 IIQSRFNIMMMNGLFIMVFCNILGVFKNYT-FNFDESLAFFVSTVLLCTHKHNGWSFFSF 347
           ++   F + ++N   +  F  I+ VF      N  ES A+  S    C H H    FFSF
Sbjct: 43  VVFKDFRVFLVNSSTLQFFMCIIVVFTQVRPVNNPESSAYLFSG--FCRHTHKNACFFSF 100

Query: 346 N 344
           +
Sbjct: 101 D 101


>Z70212-7|CAA94167.1|  332|Caenorhabditis elegans Hypothetical
           protein R04D3.9 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -2

Query: 535 VDYSIIQSRFNIMMMNGLFIMV 470
           VDYS++ SR N  ++NGL I++
Sbjct: 189 VDYSVLPSRINATIVNGLVIIL 210


>Z68116-11|CAA92176.1|  317|Caenorhabditis elegans Hypothetical
           protein F17A2.8 protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -2

Query: 535 VDYSIIQSRFNIMMMNGLFIMV 470
           VDYS++ SR N +++NGL ++V
Sbjct: 177 VDYSVLPSRVNGIIINGLVVIV 198


>Z68114-12|CAA92163.1|  317|Caenorhabditis elegans Hypothetical
           protein F17A2.8 protein.
          Length = 317

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -2

Query: 535 VDYSIIQSRFNIMMMNGLFIMV 470
           VDYS++ SR N +++NGL ++V
Sbjct: 177 VDYSVLPSRVNGIIINGLVVIV 198


>U42437-2|AAW88401.1|  294|Caenorhabditis elegans Hypothetical
           protein F30B5.8 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/48 (39%), Positives = 28/48 (58%)
 Frame = -2

Query: 526 SIIQSRFNIMMMNGLFIMVFCNILGVFKNYTFNFDESLAFFVSTVLLC 383
           SI  SRF ++    LFI++ CNI GV +  T  F  S+A F+  + +C
Sbjct: 68  SITFSRFFMIKNMMLFIIIMCNIFGVIRT-TLIF--SIA-FLRVIAIC 111


>AL034364-4|CAA22250.2|  290|Caenorhabditis elegans Hypothetical
           protein W06D4.2 protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -2

Query: 529 YSIIQSRFNIMMMNGLFIMVFCNILGVFKNYTFNFDESLAFFVSTVLL 386
           +SI+ S FNI+ + GL+I  F  I+   K+  F   ES A ++   +L
Sbjct: 226 FSIVISLFNIVHVTGLYIH-FQVIMQFVKDKNFLVGESQAIYIGVSIL 272


>Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical
           protein C33D3.3 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -3

Query: 663 SKFHSYEHK*PNDLINFTNHTHDSIVT 583
           +K H++E K PN  I  T+H ++ +VT
Sbjct: 191 NKKHNFEEKQPNQSIQSTSHHYNPVVT 217


>Z30662-1|CAA83137.1|  344|Caenorhabditis elegans Hypothetical
           protein T16H12.1 protein.
          Length = 344

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 264 LSSGPCGFLGIFHGSDESMVYRSKQTELKEKKLQPLCLCV 383
           +SS  C F G  H +DE   Y +   E +  +LQ L LCV
Sbjct: 261 VSSETCKFCGNRHSTDECTEYTT--GESRRARLQKLLLCV 298


>X89080-1|CAA61451.1|  113|Caenorhabditis elegans dad-1 protein.
          Length = 113

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 523 IIQSRFNIMMMNGLFIMVFCNILGVFKNYTFNFDESLAFFVSTV 392
           II +    ++  G+F  ++C ++G     TF F+  L+ F+STV
Sbjct: 26  IIDAYMTYILFTGIFQFIYCLLVG-----TFPFNSFLSGFISTV 64


>AF039713-4|AAB96727.1|  113|Caenorhabditis elegans Dad (defender
           against apoptoticdeath) homolog protein 1 protein.
          Length = 113

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 523 IIQSRFNIMMMNGLFIMVFCNILGVFKNYTFNFDESLAFFVSTV 392
           II +    ++  G+F  ++C ++G     TF F+  L+ F+STV
Sbjct: 26  IIDAYMTYILFTGIFQFIYCLLVG-----TFPFNSFLSGFISTV 64


>AC006807-6|AAK84620.2|  230|Caenorhabditis elegans Hypothetical
           protein Y58A7A.6 protein.
          Length = 230

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 27  ASGA*GSSQETRQRGGQREKETQETVFGAGRHQNRTRRLGHR 152
           +S + GSSQ T     ++ KE  E +F      NR+R L +R
Sbjct: 6   SSSSNGSSQITANPHDEKTKEKVEKLFRQNNRTNRSRSLDNR 47


>AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical
           protein H04D03.4 protein.
          Length = 688

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -2

Query: 391 LLCTHKHNGWSFFSFNSV---CLLRYTIDSSDP*KIPKKPQ 278
           LL  HKH  W+ F   SV   CL +  IDS+D   + K+ Q
Sbjct: 465 LLIRHKHEKWTLFHAFSVVEKCLNQGFIDSNDIIDLIKRHQ 505


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,060
Number of Sequences: 27780
Number of extensions: 337169
Number of successful extensions: 848
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)