Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00850
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.5  
AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding pr...    23   7.9  
AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding pr...    23   7.9  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 20/82 (24%), Positives = 35/82 (42%)
 Frame = +2

Query: 131 IVKMAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELLQVPPIASSWTCCSLAVYQ 310
           I+ +A  ++    T E L     L ++  CL++      ++  V   ++  T   L    
Sbjct: 187 ILGLAGPLHGAGCTPERLCWE--LHYLERCLRARIETASDITSVLRFSTKPTELILECIP 244

Query: 311 *KESNLRQIWNMNIYRTLKYYK 376
            K SNL Q+  M I R + + K
Sbjct: 245 PKPSNLTQLLRMLIQRQIAFLK 266


>AY146731-1|AAO12091.1|  150|Anopheles gambiae odorant-binding
           protein AgamOBP4 protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 485 SKNFLNHCKNSKLSWKRP 432
           +K  L HCK+++ S+K P
Sbjct: 111 AKEALTHCKDTQTSYKDP 128


>AF437887-1|AAL84182.1|  150|Anopheles gambiae odorant binding
           protein protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 485 SKNFLNHCKNSKLSWKRP 432
           +K  L HCK+++ S+K P
Sbjct: 111 AKEALTHCKDTQTSYKDP 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,906
Number of Sequences: 2352
Number of extensions: 17491
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)