Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00848
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    27   0.13 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    23   2.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   8.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   8.7  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 14/50 (28%), Positives = 29/50 (58%)
 Frame = +3

Query: 447 SENYKLKNYIPI*YSFESSSTLDNEIQNVRNEGTLISFLYPAQNQDLIKK 596
           +EN   KN++P+  S++S   L+ E ++  +   L + L   + +D++KK
Sbjct: 430 AENLLEKNWLPVHTSYKSGLNLEQEKKDSISHYHLYTNLTALRKRDVLKK 479


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 533 YILYFII*GGRTFKTISDWNVV 468
           +I++  +  G   KTI  WNV+
Sbjct: 6   WIVFLALANGEEIKTIYSWNVI 27


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 585 NLDFEQDRGKISMFLHSLHFVFHYL 511
           +L+F Q RG+   FLH      +YL
Sbjct: 247 SLNFPQIRGEFYFFLHKQVLNRYYL 271


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 585 NLDFEQDRGKISMFLHSLHFVFHYL 511
           +L+F Q RG+   FLH      +YL
Sbjct: 247 SLNFPQIRGEFYFFLHKQVLNRYYL 271


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,502
Number of Sequences: 438
Number of extensions: 3510
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)