Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00847
(807 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 51 9e-07
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 48 7e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 48 1e-05
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 46 5e-05
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 42 8e-04
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 40 0.003
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 37 0.016
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 37 0.022
04_03_0920 + 20826876-20829293 31 1.1
07_03_1563 - 27746977-27747180,27747280-27747369,27747529-277477... 29 5.8
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 28 7.6
04_03_0923 + 20843477-20845044,20846081-20846996 28 7.6
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 51.2 bits (117), Expect = 9e-07
Identities = 21/66 (31%), Positives = 42/66 (63%)
Frame = +2
Query: 299 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 478
++AK LH+A+ G+GT++ +I ++ T + ++ I A Y + Y +SL + +TSG+++
Sbjct: 276 YFAKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYR 335
Query: 479 RLCVSL 496
+SL
Sbjct: 336 TFLLSL 341
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +2
Query: 293 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 472
P A +LH A G G D A+ IL I Y +Y + L L + SGH
Sbjct: 13 PRRDAIDLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGH 72
Query: 473 FKR 481
KR
Sbjct: 73 HKR 75
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +2
Query: 305 AKELHDAVSG-IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL-KGDTSGHFK 478
A+EL+ A +GTDE I + S + ++A Y +Y +SLE + + T+ +
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLEKVIYRSCTAAYAL 236
Query: 479 RLCVSLCMAN 508
L SL N
Sbjct: 237 ALVFSLSEFN 246
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +1
Query: 589 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 747
GT+++ ++ TR+ ++ I AEY + + D++ E SG+ +L++
Sbjct: 289 GTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRTFLLSL 341
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 HLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLY-- 427
H V++ ++ P A LH A++G TD A E++C+ + + + Y +
Sbjct: 73 HKRAVLLWVLDPASRD-AAVLHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYLARFGG 131
Query: 428 --GKSLESDLKGDTSGHFKRLCVS 493
G LE D+ SG +RL ++
Sbjct: 132 GGGGGLEHDVAVRASGDHQRLLLA 155
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/66 (31%), Positives = 40/66 (60%)
Frame = +2
Query: 299 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 478
++AK L ++ G+GTD+ +I ++ T + ++ I A Y + Y KSL + +TSG+++
Sbjct: 233 YFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYR 292
Query: 479 RLCVSL 496
+SL
Sbjct: 293 TFLLSL 298
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +2
Query: 305 AKELHDA-VSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK- 478
AK+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TSG+F+
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFEL 218
Query: 479 -RLCVSLCMANAMKTRAS-MKAQLKPMLKHWPPLVKV 583
L + C N K A ++ +K M L++V
Sbjct: 219 ALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRV 255
Score = 34.7 bits (76), Expect = 0.088
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 305 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 484
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG ++L
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Query: 485 CVS 493
++
Sbjct: 136 LLA 138
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 589 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAI 747
GTD+S +++TR+ ++ I AEY K + ++I E SG+ +L++
Sbjct: 246 GTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSLAEAIHSETSGNYRTFLLSL 298
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 100 LRKAMKGFGTDEKAIIDVLCRR 165
LRK+MKG GTD+ +I V+ R
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTR 259
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/66 (30%), Positives = 41/66 (62%)
Frame = +2
Query: 299 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 478
++ K + A++G+GTDE ++ I+ T + ++ I+ Y++ LE + GDTSG ++
Sbjct: 247 YFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAYQKRNSVPLERAVAGDTSGDYE 306
Query: 479 RLCVSL 496
R+ ++L
Sbjct: 307 RMLLAL 312
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = +1
Query: 586 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 741
WGT+E++ SIL R Q R I Y G+++ SI E SG E+ ++
Sbjct: 27 WGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Score = 35.9 bits (79), Expect = 0.038
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +2
Query: 284 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 463
T L H AK LH+ + ++ II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADP 226
Query: 464 SGHF 475
F
Sbjct: 227 KDEF 230
Score = 34.7 bits (76), Expect = 0.088
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 311 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCV 490
+L A G GT+E II IL R I Y YG+ L + + SG F+R +
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFERAVI 78
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 338 GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMA 505
G+ ++EI C + + Y + + +SLE D+ +G F++L V L A
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKLLVPLISA 157
Score = 31.9 bits (69), Expect = 0.62
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 100 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSRR 195
LRKA +G+GT+E II +L R Q RR
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRR 51
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/80 (26%), Positives = 45/80 (56%)
Frame = +2
Query: 257 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 436
L+ + L +P HF A+ + ++ G+GTDEE + + + + + + Y+ Y +
Sbjct: 286 LKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKVRYNTT 344
Query: 437 LESDLKGDTSGHFKRLCVSL 496
+ +D++GDTSG++ ++L
Sbjct: 345 VTADVRGDTSGYYMNTLLTL 364
Score = 44.8 bits (101), Expect = 8e-05
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +2
Query: 257 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 436
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 437 LESDLKGDTSGHFKRLCVSLCM----ANAMKTRASMKAQLKPMLKHWPPLVKV 583
L L + SG F+ + M +A ++K + K L+H LV+V
Sbjct: 107 LLDRLHSELSGDFRSALMLWTMDPAARDAKLANEALKKKKKGELRHIWVLVEV 159
Score = 35.1 bits (77), Expect = 0.066
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 586 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGML 741
WGTDE+ IL R+ Q +I YE L + + D + E SG ++
Sbjct: 73 WGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLLDRLHSELSGDFRSALM 124
Score = 32.7 bits (71), Expect = 0.35
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 97 TLRKAMKGFGTDEKAIIDVLCRRGIVQ 177
++RKA++G+GTDE A+I++L R Q
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQ 91
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 305 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 457
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDG 276
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +2
Query: 257 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 436
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 437 LESDLKGDTSGHFKR 481
L L+ + SG +R
Sbjct: 61 LIQRLQSELSGDLER 75
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +1
Query: 586 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGM 738
WGTDE +L R Q +QI YE +++ ++ E SG +E+ M
Sbjct: 27 WGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLIQRLQSELSGDLERAM 77
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 100 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSR 192
L KA +G+GTDE+A+I VL R Q + R
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIR 50
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 183 EIAETFKTNYGKDLISELKSELTGTWKMSSSH 278
+I T++ NY ++LI L+SEL+G + + H
Sbjct: 48 QIRLTYEENYNENLIQRLQSELSGDLERAMYH 79
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 595 DESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 759
DE++ + RS QLR F Y+ + G D ++KK G E+ + + KC+
Sbjct: 187 DEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFEQSLRVVVKCI 241
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 305 AKELHDAV-SGIGT-DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 478
A+ L+DA SG+G+ DE I+E+ S +R Y+ +YG LK + G F+
Sbjct: 172 ARRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFE 231
Query: 479 R 481
+
Sbjct: 232 Q 232
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 37.1 bits (82), Expect = 0.016
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 320 DAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVS 493
DA+ G D + ++E++CT + + I Y+ Y SLE D+ TSG + ++
Sbjct: 115 DALFGRRIDGDVLVEVVCTRPSGEVALIRQAYQARYSASLERDVSSRTSGSLNEVLLA 172
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 36.7 bits (81), Expect = 0.022
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +2
Query: 269 IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 448
I+ T ++ K + A+ G+GTDE ++ I+ T + ++ I Y++ LE
Sbjct: 162 IIRCFTCPDRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAYQKRNSVPLERA 221
Query: 449 LKGDTSGHFKRLCVSL 496
+ DT+ ++ + ++L
Sbjct: 222 VAKDTTRDYEDILLAL 237
Score = 35.9 bits (79), Expect = 0.038
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1
Query: 100 LRKAMKGFGTDEKAIIDVLCRRGIVQASRSRR 195
LRKA KG+GT+EK II +L R Q RR
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRR 51
Score = 33.5 bits (73), Expect = 0.20
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 308 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 484
++L A G GT+E+ II IL R I Y + YG+ L L + G F+ L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELL 76
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 586 WGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIE 729
WGT+E + SIL R Q R I Y G+++ ++ E G E
Sbjct: 27 WGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFE 74
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 290 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 469
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>07_03_1563 -
27746977-27747180,27747280-27747369,27747529-27747753,
27748002-27748115,27748218-27748423,27748757-27748832
Length = 304
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 589 GTDESIFNSILITRSYQQLRQIFAEYEALTGKDIEDSIKKEFSGSIEKGMLAIAKCV 759
G DE + I+ TRS QLR F Y G DI + I G + + C+
Sbjct: 174 GEDEVV--RIVTTRSKSQLRATFQRYREDHGSDIAEDIDSHCIGQFGRMLKTAVWCL 228
>07_03_0481 - 18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 566 PPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKL*PEKTL 691
P ++K + P+ ++PS S A D S+PST PE+T+
Sbjct: 2006 PAVIKSSDTPSLNLNSPSSSSAGSRGQDASTPSTFEEPERTM 2047
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/60 (28%), Positives = 27/60 (45%)
Frame = +2
Query: 290 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 469
LPH A+ + A S + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWHDELYNVKQLSDSSSDGNG 424
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,957,185
Number of Sequences: 37544
Number of extensions: 451129
Number of successful extensions: 1403
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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