Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00846
(761 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62010.1 68416.m06964 expressed protein 31 0.63
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 31 0.63
At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein si... 31 1.1
At2g11620.1 68415.m01249 hypothetical protein 31 1.1
At1g14230.1 68414.m01684 nucleoside phosphatase family protein /... 30 1.9
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 29 3.4
At1g27430.1 68414.m03343 GYF domain-containing protein contains ... 29 3.4
At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR... 29 4.5
At5g42830.1 68418.m05219 transferase family protein similar to a... 29 4.5
At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1 ... 28 5.9
At5g55690.1 68418.m06943 MADS-box protein (AGL47) 28 7.8
At1g44820.1 68414.m05134 aminoacylase, putative / N-acyl-L-amino... 28 7.8
>At3g62010.1 68416.m06964 expressed protein
Length = 1254
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 274 QLEQLDAMLDQELALEGRAYGNDALVADE 360
++EQ++A L +++ +E YGN LV DE
Sbjct: 124 RVEQMEARLKEDILMEASRYGNKILVTDE 152
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 277 LEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGVPPMLSSVLPE 429
L +LD++ D L R GN+A V D+P P+ HA HG PP + PE
Sbjct: 89 LRKLDSIKDHLL----RGGGNNATVVDQP-PMG-FHAHHGPPPSYYNPYPE 133
>At3g49350.1 68416.m05395 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 554
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 210 PPSSWEPLYWLRVG*SSFIMPSARAAGCNARPRTR 314
PPSS W+++ + F++ S+ A C+ RPR +
Sbjct: 23 PPSSSSSSSWIQIRSALFVVASSSPASCSDRPRLK 57
>At2g11620.1 68415.m01249 hypothetical protein
Length = 491
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 44 VMEKEHQPDSMATITMKPEYPPSEVYSTSEPPPAYRHRVS 163
V+ + + M + MKPE PP ++Y +P P + S
Sbjct: 253 VLRYDGNNNGMQGVLMKPEKPPQDLYGQCQPQPQIQRNFS 292
>At1g14230.1 68414.m01684 nucleoside phosphatase family protein /
GDA1/CD39 family protein low similarity to SP|P49961
Ectonucleoside triphosphate diphosphohydrolase 1 (EC
3.6.1.5) (Ecto-apyrase) {Homo sapiens}; contains Pfam
profile PF01150: GDA1/CD39 (nucleoside phosphatase)
family
Length = 503
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = -1
Query: 671 ESARQLIKVKLNRQFEHRSNRFKFVVLFSRTVGLRTLITRVW*VILIVVN-FLQFASFIL 495
ES +L++ R H+ K + T G+R L V IL V L+ + F
Sbjct: 136 ESVTELVEFAKKRV--HKGKLKKSDIRLMATAGMRLLELPVQEQILDVTRRVLRSSGFDF 193
Query: 494 DSAWLSASSLKRLGREDDGWLVSGNTEDSMGGTPCKAWAFASGKGSSA 351
W S S G W+V+ + S+GG P K G+SA
Sbjct: 194 RDEWASVISGSDEGVY--AWVVANHALGSLGGEPLKTTGIVELGGASA 239
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Frame = +1
Query: 241 FELGRARSSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHALHGV--PPMLS 414
++L S QL L ++ D A + N + +P P++ H + PP S
Sbjct: 332 YQLSSRSSEAAQLSLLPSVSDSSHASQPTR-SNQSHAVSKPQPVSKPHPPFPMSQPPPTS 390
Query: 415 SVLPETSQPSSSRPSLFKDDALNHAESKINEAN 513
+ P + PS+S+P + N +++++
Sbjct: 391 NPFPLSQPPSNSKPFPMSQSSQNSKPFPVSQSS 423
>At1g27430.1 68414.m03343 GYF domain-containing protein contains Pfam
profile: PF02213 GYF domain
Length = 1531
Score = 29.1 bits (62), Expect = 3.4
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 473 SSLKRLGREDDGWLVSGNTED 411
S ++RLG + + W+V G+T+D
Sbjct: 1148 SEIRRLGEDPNSWMVGGSTDD 1168
>At5g46520.1 68418.m05728 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 137 PPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASS 247
PP H +S S+ + KI+ V SSF+L T +ASS
Sbjct: 7 PPRQTHYLS-SISLLKISISKVFVSSFLLLTLSMASS 42
>At5g42830.1 68418.m05219 transferase family protein similar to
anthranilate N-hydroxycinnamoyl/benzoyltransferase,
Dianthus caryophyllus [gi:2239091]; contains Pfam
transferase family domain PF002458
Length = 450
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 400 PPMLSSVLPETSQPSSSRPSLFKDDALNHAESKINEAN--CRKLTTIRMTHQTRVMRVLS 573
PP+L +PE P S P D+ + ES I + C TIRM +TRV ++
Sbjct: 203 PPVLKRYIPEGYGPLFSLPYSHPDEFIRTYESPILKERMFCFSSETIRML-KTRVNQICG 261
Query: 574 PT 579
T
Sbjct: 262 TT 263
>At4g20370.1 68417.m02973 twin sister of FT protein (TSF) / TFL1
like protein identical to SP|Q9S7R5 TWIN SISTER of FT
protein (TFL1 like protein) {Arabidopsis thaliana};
contains Pfam profile PF01161:
Phosphatidylethanolamine-binding protein
Length = 175
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 262 SSCHQLEQLDAMLDQELALEGRAYGNDALVADEPLPLANAHAL 390
S+ HQ E L ++ A G A+GN+ + + P P + H +
Sbjct: 78 SNPHQREYLHWLVTDIPATTGNAFGNEVVCYESPRPPSGIHRI 120
>At5g55690.1 68418.m06943 MADS-box protein (AGL47)
Length = 277
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 508 ANCRKLTTIRMTHQTRVMRVLSPTVLLKRTTNLKRLDRCS-NCLFSL 645
++C K T++ + +V PT+ K T K+LD+CS N L+++
Sbjct: 84 SSCTKTYTVQECLEKNNTKVEKPTIATKYPTWDKKLDQCSLNDLYAV 130
>At1g44820.1 68414.m05134 aminoacylase, putative /
N-acyl-L-amino-acid amidohydrolase, putative similar to
aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase
ACY-1)[Homo sapiens] SWISS-PROT:Q03154
Length = 438
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 119 YSTSEPPPAYRHRVSTSVQIAKIAALTVVASSFILGTFILASSWV 253
++T+ P P Y +S + A+ LT FI G IL +W+
Sbjct: 39 FNTAHPNPNYTAPISFLINQAQSIGLTTKTIEFISGKPILLITWL 83
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,923,137
Number of Sequences: 28952
Number of extensions: 326676
Number of successful extensions: 1518
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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