Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00844
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 178 1e-43
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 143 5e-33
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 138 1e-31
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 132 1e-29
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 131 2e-29
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 131 2e-29
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 131 2e-29
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 130 5e-29
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 129 6e-29
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 127 3e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 123 5e-27
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 122 9e-27
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 122 9e-27
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 117 4e-25
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 115 1e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 112 8e-24
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 112 1e-23
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 110 3e-23
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 110 4e-23
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 109 7e-23
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 109 9e-23
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 108 2e-22
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 107 3e-22
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 106 5e-22
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 106 7e-22
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 103 4e-21
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 103 4e-21
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 4e-19
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 96 9e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 93 7e-18
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 91 2e-17
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 91 4e-17
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 91 4e-17
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 85 1e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 85 2e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 84 3e-15
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 83 7e-15
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 83 9e-15
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 82 1e-14
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 82 2e-14
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 80 5e-14
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 79 9e-14
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 79 2e-13
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 2e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 78 2e-13
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 78 2e-13
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 78 3e-13
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 78 3e-13
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 77 5e-13
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 77 6e-13
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 76 8e-13
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 75 2e-12
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 74 3e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 74 3e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 4e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 8e-12
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 72 1e-11
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 71 2e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 71 3e-11
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 70 5e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 70 5e-11
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 70 7e-11
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 69 9e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 9e-11
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 69 2e-10
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 68 2e-10
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 68 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 68 3e-10
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 67 4e-10
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 67 5e-10
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 67 5e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 66 7e-10
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 7e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 66 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 65 2e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 64 3e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 64 3e-09
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 64 3e-09
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 64 4e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 64 5e-09
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 63 8e-09
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 63 8e-09
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 62 1e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 62 1e-08
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 62 2e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 61 2e-08
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 61 3e-08
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 60 4e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 60 4e-08
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 59 1e-07
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 58 2e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 7e-07
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 53 7e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 52 2e-05
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 51 3e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 4e-05
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 46 0.001
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 45 0.002
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 44 0.003
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 44 0.005
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 42 0.021
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 39 0.11
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 1.4
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.4
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 2.5
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 2.5
UniRef50_A1ZLX9 Cluster: Membrane protein, putative; n=1; Micros... 34 3.3
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 4.3
UniRef50_Q8SH27 Cluster: Cytochrome oxidase subunit I; n=1; Bolb... 33 9.9
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 178 bits (433), Expect = 1e-43
Identities = 89/144 (61%), Positives = 100/144 (69%)
Frame = +1
Query: 64 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 243
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 244 NLC*LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 423
NLC ++ ++ + YFTSAT+IIAVPTGIKIF LAT HGTQIN
Sbjct: 67 NLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAVPTGIKIFSWLATFHGTQIN 126
Query: 424 YNPNIL*RLGFVFLFTVGGLTGVI 495
Y+P+IL LGFVFLFTVGGLTGVI
Sbjct: 127 YSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 143 bits (346), Expect = 5e-33
Identities = 65/80 (81%), Positives = 72/80 (90%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYILILPGFGIISH+I E
Sbjct: 187 AGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYILILPGFGIISHMIFNES 246
Query: 212 GKKETFGCLGIIYAN*QLGY 271
GKKETFG LG+IYA +G+
Sbjct: 247 GKKETFGMLGMIYAMLTIGF 266
Score = 125 bits (302), Expect = 1e-27
Identities = 61/103 (59%), Positives = 75/103 (72%)
Frame = +1
Query: 199 FTRKRKKRNFWLFRNNLC*LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGI 378
F KK F + L IG LGFIV AHH+FT+G+D+DTRAYFTSAT+IIA+PTGI
Sbjct: 243 FNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGI 302
Query: 379 KIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 507
KIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+NS
Sbjct: 303 KIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSNS 345
Score = 89.4 bits (212), Expect = 8e-17
Identities = 39/70 (55%), Positives = 46/70 (65%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ LHDTYY VAHFHYVLS +P+F GL +N Y LKI F+ FIGVN
Sbjct: 347 VDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYFLKIHFYLTFIGVN 406
Query: 690 ITFFPQHFLG 719
+ FFPQHFLG
Sbjct: 407 LIFFPQHFLG 416
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 138 bits (335), Expect = 1e-31
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIGLLGF+V AHH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P
Sbjct: 191 MAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPV 250
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
L LGFVFLFTVGGLTGV+LANS
Sbjct: 251 TLWTLGFVFLFTVGGLTGVVLANS 274
Score = 86.2 bits (204), Expect = 8e-16
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
IDI LHDTYYVVAHFHYVLS +PLFTG++LN++ LKIQF +FIGVN
Sbjct: 276 IDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGVN 335
Query: 690 ITFF 701
+TFF
Sbjct: 336 LTFF 339
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +2
Query: 149 EVYILILPGFGIISHIISQERGKKETFGCLGIIYAN*QLG 268
EVYILILPGFG+ISHIISQE GKKE FG LG+IYA +G
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIG 194
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 132 bits (318), Expect = 1e-29
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISHI++
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYS 262
Query: 212 GKKETFGCLGIIYAN*QLGY 271
GKKE FG +G+++A +G+
Sbjct: 263 GKKEPFGYMGMVWAMMSIGF 282
Score = 128 bits (310), Expect = 1e-28
Identities = 56/84 (66%), Positives = 74/84 (88%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++IG LGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++
Sbjct: 278 MSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAA 337
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L LGF+FLFTVGGLTG++LANS
Sbjct: 338 VLWALGFIFLFTVGGLTGIVLANS 361
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS + +PLF+G +L+ KI F +FIGVN
Sbjct: 363 LDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVN 422
Query: 690 ITFFPQHFLG 719
+TFFPQHFLG
Sbjct: 423 LTFFPQHFLG 432
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 131 bits (317), Expect = 2e-29
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++
Sbjct: 204 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYA 263
Query: 212 GKKETFGCLGIIYAN*QLGY 271
GKKE FG +G+++A +G+
Sbjct: 264 GKKEPFGYMGMVWAMLSIGF 283
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/70 (58%), Positives = 47/70 (67%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS K F +F GVN
Sbjct: 364 LDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVN 423
Query: 690 ITFFPQHFLG 719
+TFFPQHFLG
Sbjct: 424 LTFFPQHFLG 433
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/84 (40%), Positives = 42/84 (50%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
L+IG LGFIV A LAT+HG I ++P
Sbjct: 279 LSIGFLGFIVWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLATLHGGTIKWDPP 338
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L LGF+FLFTVGGLTG++LANS
Sbjct: 339 MLWALGFIFLFTVGGLTGIVLANS 362
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 131 bits (316), Expect = 2e-29
Identities = 60/84 (71%), Positives = 74/84 (88%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++
Sbjct: 43 MAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTP 102
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L LGF+FLFTVGGLTG+ILANS
Sbjct: 103 MLWALGFIFLFTVGGLTGIILANS 126
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/45 (64%), Positives = 37/45 (82%)
Frame = +2
Query: 134 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYAN*QLG 268
FFGHPEVYILILPGFG+ISHI++ GKKE FG +G+++A +G
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIG 46
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/57 (47%), Positives = 36/57 (63%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFI 680
+DI LHDTYYVVAHFHYVLS + +PLF+G +L++ KI F +F+
Sbjct: 128 LDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTWTKIHFGVMFM 184
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 131 bits (316), Expect = 2e-29
Identities = 58/79 (73%), Positives = 68/79 (86%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISH+++
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHVVAYYA 262
Query: 212 GKKETFGCLGIIYAN*QLG 268
GKKE FG +G+++A +G
Sbjct: 263 GKKEPFGYMGMVWAMMAIG 281
Score = 130 bits (313), Expect = 5e-29
Identities = 59/84 (70%), Positives = 73/84 (86%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I +
Sbjct: 278 MAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETP 337
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L LGF+FLFTVGGLTG++LANS
Sbjct: 338 MLWALGFIFLFTVGGLTGIVLANS 361
Score = 93.1 bits (221), Expect = 7e-18
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS + +PLFTG +LNS KI F +FIGVN
Sbjct: 363 LDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVN 422
Query: 690 ITFFPQHFLG 719
+TFFPQHFLG
Sbjct: 423 LTFFPQHFLG 432
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 130 bits (313), Expect = 5e-29
Identities = 57/79 (72%), Positives = 68/79 (86%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFG+ISH+++
Sbjct: 203 AAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYA 262
Query: 212 GKKETFGCLGIIYAN*QLG 268
GKKE FG +G+++A +G
Sbjct: 263 GKKEPFGYMGMVWAMMAIG 281
Score = 130 bits (313), Expect = 5e-29
Identities = 59/84 (70%), Positives = 73/84 (86%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIGLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I +
Sbjct: 278 MAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETP 337
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L LGF+FLFTVGGLTG++LANS
Sbjct: 338 MLWALGFIFLFTVGGLTGIVLANS 361
Score = 89.8 bits (213), Expect = 6e-17
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
IDI LHDTYYVVAHFHYVLS + +PLFTG +L+ KI F +FIGVN
Sbjct: 363 IDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVN 422
Query: 690 ITFFPQHFLG 719
+TFFPQHFLG
Sbjct: 423 LTFFPQHFLG 432
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 129 bits (312), Expect = 6e-29
Identities = 61/79 (77%), Positives = 67/79 (84%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYILILPGFGIISHI+S
Sbjct: 206 AGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFS 265
Query: 212 GKKETFGCLGIIYAN*QLG 268
G K FG LG++YA +G
Sbjct: 266 G-KPVFGYLGMVYAMISIG 283
Score = 122 bits (295), Expect = 7e-27
Identities = 55/84 (65%), Positives = 72/84 (85%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++IG+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y
Sbjct: 280 ISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTP 339
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L +GF+FLFT+GGLTG++LANS
Sbjct: 340 MLFAVGFIFLFTIGGLTGIVLANS 363
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/70 (47%), Positives = 39/70 (55%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS G + + +I F+ F GVN
Sbjct: 365 LDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVN 424
Query: 690 ITFFPQHFLG 719
+TFFP HFLG
Sbjct: 425 LTFFPMHFLG 434
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 127 bits (306), Expect = 3e-28
Identities = 58/79 (73%), Positives = 67/79 (84%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYILI+PGFG++SHI+S
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFS 262
Query: 212 GKKETFGCLGIIYAN*QLG 268
G K FG LG++YA +G
Sbjct: 263 G-KPVFGYLGMVYAMFSIG 280
Score = 114 bits (274), Expect = 3e-24
Identities = 52/83 (62%), Positives = 69/83 (83%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
+IG+LGF+V +HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +
Sbjct: 278 SIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPM 337
Query: 439 L*RLGFVFLFTVGGLTGVILANS 507
L LGF+ LFT+GGLTGVILAN+
Sbjct: 338 LFALGFIALFTIGGLTGVILANA 360
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 123 bits (296), Expect = 5e-27
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYILILPGFG+ISHI+S
Sbjct: 211 AGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TF 269
Query: 212 GKKETFGCLGIIYAN*QLG 268
+K FG +G++YA +G
Sbjct: 270 SRKPVFGYIGMVYAMVSIG 288
Score = 117 bits (282), Expect = 3e-25
Identities = 54/84 (64%), Positives = 71/84 (84%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++IG+LGFIV AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+
Sbjct: 285 VSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTP 344
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L +GF+FLFT+GGLTG++LANS
Sbjct: 345 MLFAIGFIFLFTIGGLTGIVLANS 368
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI+LHDTYYVVAHFHYVLS + TGL + +I F++ FIGVN
Sbjct: 370 LDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETLGQIHFWSTFIGVN 429
Query: 690 ITFFPQHFLG 719
+TF P HFLG
Sbjct: 430 LTFMPMHFLG 439
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 122 bits (294), Expect = 9e-27
Identities = 54/84 (64%), Positives = 72/84 (85%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIG+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + +
Sbjct: 255 IAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETP 314
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+ LGFVFLFT+GGLTG++LANS
Sbjct: 315 LFWALGFVFLFTLGGLTGIVLANS 338
Score = 107 bits (256), Expect = 4e-22
Identities = 47/68 (69%), Positives = 56/68 (82%)
Frame = +2
Query: 65 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGI 244
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG LG+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 245 IYAN*QLG 268
+YA +G
Sbjct: 251 VYAMIAIG 258
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN 641
ID+ LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 340 IDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 122 bits (294), Expect = 9e-27
Identities = 53/83 (63%), Positives = 74/83 (89%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
+IG+LGF+V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++
Sbjct: 279 SIGILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSL 338
Query: 439 L*RLGFVFLFTVGGLTGVILANS 507
L LGFVF+FT+GGL+GV+LAN+
Sbjct: 339 LFALGFVFMFTIGGLSGVVLANA 361
Score = 116 bits (278), Expect = 8e-25
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYILI+PGFGIIS IS
Sbjct: 204 AGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYILIIPGFGIISTTIS-AN 262
Query: 212 GKKETFGCLGIIYAN*QLG 268
K FG LG++YA +G
Sbjct: 263 SNKSVFGYLGMVYAMCSIG 281
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/70 (51%), Positives = 40/70 (57%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI HDTYYVVAHFHYVLS P GL N K F+ +F GVN
Sbjct: 363 LDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVN 422
Query: 690 ITFFPQHFLG 719
+TFFPQHFLG
Sbjct: 423 LTFFPQHFLG 432
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 117 bits (281), Expect = 4e-25
Identities = 51/84 (60%), Positives = 72/84 (85%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++IGLLGFIV +HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++
Sbjct: 304 MSIGLLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTP 363
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+L LGFV +FT+GGL+GV+LAN+
Sbjct: 364 MLFALGFVVMFTIGGLSGVVLANA 387
Score = 114 bits (275), Expect = 2e-24
Identities = 55/79 (69%), Positives = 63/79 (79%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYILI+PGFGIIS +IS
Sbjct: 230 AAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-AN 288
Query: 212 GKKETFGCLGIIYAN*QLG 268
K FG LG++YA +G
Sbjct: 289 SNKNVFGYLGMVYAMMSIG 307
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/69 (53%), Positives = 43/69 (62%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
+I HDTYYVVAHFHYVLS P GLS ++ KI F+ +FIGVN+
Sbjct: 390 NIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKASKIHFWILFIGVNL 449
Query: 693 TFFPQHFLG 719
TFFPQHFLG
Sbjct: 450 TFFPQHFLG 458
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 115 bits (276), Expect = 1e-24
Identities = 52/74 (70%), Positives = 62/74 (83%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+ILP FG+ISHI++
Sbjct: 309 AGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIVILPAFGVISHIVA-TF 367
Query: 212 GKKETFGCLGIIYA 253
KK FG L ++YA
Sbjct: 368 SKKPIFGYLPMVYA 381
Score = 94.7 bits (225), Expect = 2e-18
Identities = 44/84 (52%), Positives = 64/84 (76%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIG LGF+V AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++
Sbjct: 383 VAIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTP 442
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
++ LGF+FLFT+GG TG+IL+ +
Sbjct: 443 MMFALGFIFLFTLGGTTGIILSQA 466
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/74 (44%), Positives = 40/74 (54%)
Frame = +3
Query: 498 SQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 677
SQ +D HDTYYVVAHFHYV+S +G + ++ F+ F
Sbjct: 464 SQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWAGQVHFWVFF 523
Query: 678 IGVNITFFPQHFLG 719
IG NITFFPQHFLG
Sbjct: 524 IGTNITFFPQHFLG 537
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 112 bits (270), Expect = 8e-24
Identities = 53/83 (63%), Positives = 68/83 (81%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
+IGLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I +
Sbjct: 279 SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPM 338
Query: 439 L*RLGFVFLFTVGGLTGVILANS 507
+ + F+FLFTVGGLTGV+LAN+
Sbjct: 339 MFAIAFLFLFTVGGLTGVVLANA 361
Score = 109 bits (262), Expect = 7e-23
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
+ IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYILI+PGFGI+SHI+S
Sbjct: 204 SAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYILIIPGFGIVSHIVS-TY 262
Query: 212 GKKETFGCLGIIYAN*QLG 268
KK FG + ++YA +G
Sbjct: 263 SKKPVFGEISMVYAMASIG 281
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 112 bits (269), Expect = 1e-23
Identities = 57/96 (59%), Positives = 73/96 (76%), Gaps = 2/96 (2%)
Frame = +1
Query: 226 FWLFRNNLC*LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 405
FW F L AIG+LGFIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+
Sbjct: 236 FWFFGAML---AIGVLGFIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATV 292
Query: 406 HGTQIN--YNPNIL*RLGFVFLFTVGGLTGVILANS 507
G+ N + + LGF+FLFT+GGLTG++L+NS
Sbjct: 293 SGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVLSNS 328
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/70 (51%), Positives = 42/70 (60%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS + TG + I F+ +F+GVN
Sbjct: 330 LDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDIYGLIHFWLMFLGVN 389
Query: 690 ITFFPQHFLG 719
ITFFPQHFLG
Sbjct: 390 ITFFPQHFLG 399
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 142
AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 204 AGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 110 bits (265), Expect = 3e-23
Identities = 50/79 (63%), Positives = 62/79 (78%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYILI+PGFGIISH++S
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYILIIPGFGIISHVVS-TY 262
Query: 212 GKKETFGCLGIIYAN*QLG 268
KK FG + ++YA +G
Sbjct: 263 SKKPVFGEISMVYAMASIG 281
Score = 76.2 bits (179), Expect = 8e-13
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+IGLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 279 SIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 110 bits (264), Expect = 4e-23
Identities = 53/79 (67%), Positives = 61/79 (77%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+ILPGFGIIS I+S
Sbjct: 246 AAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIMILPGFGIISQIVS-TF 304
Query: 212 GKKETFGCLGIIYAN*QLG 268
+K FG LG+ YA +G
Sbjct: 305 SRKPVFGYLGMAYAMVAIG 323
Score = 108 bits (260), Expect = 1e-22
Identities = 48/83 (57%), Positives = 68/83 (81%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIG++GF+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++
Sbjct: 320 VAIGVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTP 379
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
++ LGF+FLFTVGG+TGV+LAN
Sbjct: 380 MVWALGFIFLFTVGGVTGVVLAN 402
Score = 72.9 bits (171), Expect = 8e-12
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D LHDTYYVVAHFHYVLS +P +G N ++ ++ F+ F GVN
Sbjct: 405 VDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFLGQLHFWVFFAGVN 464
Query: 690 ITFFPQHFLG 719
+ FFP HFLG
Sbjct: 465 LLFFPMHFLG 474
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 109 bits (262), Expect = 7e-23
Identities = 52/79 (65%), Positives = 61/79 (77%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYILILPGFG++SHII+
Sbjct: 207 AAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYILILPGFGLVSHIIA-TF 265
Query: 212 GKKETFGCLGIIYAN*QLG 268
KK FG + +I A +G
Sbjct: 266 SKKRVFGHVPMIAAMLMIG 284
Score = 101 bits (243), Expect = 1e-20
Identities = 49/85 (57%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNP 432
L IGL+GFIV AHH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P
Sbjct: 281 LMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTP 340
Query: 433 NIL*RLGFVFLFTVGGLTGVILANS 507
GFV LFT+GG+TG+IL+N+
Sbjct: 341 MYF-AAGFVVLFTIGGITGIILSNA 364
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/70 (47%), Positives = 41/70 (58%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
ID ++HDT+YVV HFHYVLS + TGLS + + + F+ FIGVN
Sbjct: 366 IDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVN 425
Query: 690 ITFFPQHFLG 719
TFFP HFLG
Sbjct: 426 FTFFPMHFLG 435
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 109 bits (261), Expect = 9e-23
Identities = 51/76 (67%), Positives = 60/76 (78%)
Frame = +2
Query: 41 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 220
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSS-SNK 290
Query: 221 ETFGCLGIIYAN*QLG 268
FG +G++YA +G
Sbjct: 291 PIFGYIGMVYAMMSIG 306
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +1
Query: 292 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 471
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 472 VGGLTGVIL 498
+GGL +L
Sbjct: 409 IGGLLNHLL 417
Score = 60.1 bits (139), Expect = 6e-08
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +3
Query: 492 NFSQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFT 671
N+ F + +T + HFHYVLS P G + + + K+QF+
Sbjct: 464 NYKDFLATDYMLETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWL 523
Query: 672 IFIGVNITFFPQHFLG 719
+FIGVN TFFPQHFLG
Sbjct: 524 LFIGVNATFFPQHFLG 539
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 108 bits (259), Expect = 2e-22
Identities = 51/65 (78%), Positives = 59/65 (90%)
Frame = +1
Query: 313 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 492
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 493 ILANS 507
+LANS
Sbjct: 61 VLANS 65
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 29/69 (42%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 67 LDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCK 126
Query: 690 ITFFPQHFL 716
FP FL
Sbjct: 127 FNIFPPTFL 135
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = +2
Query: 584 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRLA 724
C Y IY L+ FI K L KNSIF NI+ K+NIF TF ++
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSIS 138
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 107 bits (257), Expect = 3e-22
Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++ + H++ ++
Sbjct: 200 AGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKLMFSFSQDL-VSFHMLFPKK 258
Query: 212 GKKETFGCLGIIY-AN*QLGY*DSLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFL 388
+K + + + + L Y D LFE KFL
Sbjct: 259 VEKSKLLVVSVSFMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFL 318
Query: 389 DD*LQYMELKLIITLIFYED*VLYFYSQ*ED 481
D +MELKLI+ L FYED L FY Q ED
Sbjct: 319 VDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 106 bits (255), Expect = 5e-22
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SHI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSHICMSLS 352
Query: 212 GKKETFGCLGIIYA 253
+FG G+I A
Sbjct: 353 NNDSSFGYYGLICA 366
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Frame = +1
Query: 247 LC*LA-IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 423
+C +A I LG +V HH+F VG D T +F+S T+II VPTGIK+F L ++ +
Sbjct: 364 ICAMASIVCLGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMR 423
Query: 424 -YNPNIL*RLGFVFLFTVGGLTGVILANS 507
+P + +GF+FLFTVGG+TGV L+ S
Sbjct: 424 VLDPIVWWLVGFIFLFTVGGVTGVALSAS 452
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI HDT++VVAHFHYVLS +P G SLN Y+L+ + +G N
Sbjct: 454 LDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKYLLQGHWLLSMVGFN 513
Query: 690 ITFFPQHFLG 719
+ FFP H+LG
Sbjct: 514 LCFFPMHYLG 523
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 106 bits (254), Expect = 7e-22
Identities = 47/83 (56%), Positives = 66/83 (79%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
+IG LGF V +HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +
Sbjct: 296 SIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPL 355
Query: 439 L*RLGFVFLFTVGGLTGVILANS 507
L +GF+ LFT+GG+TGV++ANS
Sbjct: 356 LYAVGFIVLFTIGGVTGVVIANS 378
Score = 103 bits (248), Expect = 4e-21
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVY 279
Query: 212 GKKETFGCLGIIYAN*QLGY 271
KK FG +G+IYA +G+
Sbjct: 280 AKKPIFGKIGMIYAMASIGF 299
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 103 bits (248), Expect = 4e-21
Identities = 45/75 (60%), Positives = 58/75 (77%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISHI+ +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 212 GKKETFGCLGIIYAN 256
K FG +G+ +A+
Sbjct: 266 AKLHVFGKIGMSWAS 280
Score = 100 bits (239), Expect = 4e-20
Identities = 48/87 (55%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG---TQINY 426
+ I +GF+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +
Sbjct: 281 MGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHS 340
Query: 427 NPNIL*RLGFVFLFTVGGLTGVILANS 507
+P+ +G V LFT+GGLTGVILAN+
Sbjct: 341 HPSTFWAIGVVLLFTIGGLTGVILANA 367
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +3
Query: 522 LHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 701
LHD+YYVVAHFHYVLS +P +TG+ ++ F FIGVN TFF
Sbjct: 373 LHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFF 432
Query: 702 PQHFLG 719
P H++G
Sbjct: 433 PMHWMG 438
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 103 bits (248), Expect = 4e-21
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYILI+P FG++S I+ Q
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYILIVPVFGVVSQIV-QVY 279
Query: 212 GKKETFGCLGIIYAN*QLGY 271
KK FG +G+IYA +G+
Sbjct: 280 AKKPIFGKIGMIYAMASIGF 299
Score = 37.1 bits (82), Expect = 0.46
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTR 330
+IG LGF V +HH+FTVG+D D R
Sbjct: 296 SIGFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = +1
Query: 316 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 480
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 95.9 bits (228), Expect = 9e-19
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 166
AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYILI
Sbjct: 176 AGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILI 220
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 93.1 bits (221), Expect = 7e-18
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = +2
Query: 35 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 202
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH+IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 81.4 bits (192), Expect = 2e-14
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Frame = +1
Query: 232 LFRNNLC*LAIG---LLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 402
LF N LA+G +LG +V HH++T G+++DTRAYFTS TI+I++PTG K+F + T
Sbjct: 272 LFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICT 331
Query: 403 IHGTQIN-YNPNIL*RLGFVFLFTVGGLTGVILANS 507
+ + + L L F+ FT GG TGVIL N+
Sbjct: 332 YMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILGNA 367
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQFFTIFIGV 686
ID+ LHDTYYV+AHFH+VLS F G +L + I+ + F+GV
Sbjct: 369 IDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLRENSIVILWSMLFFVGV 428
Query: 687 NITFFPQHFLG 719
+TF P HFLG
Sbjct: 429 ILTFLPMHFLG 439
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP FG+IS I+ +
Sbjct: 206 AGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLPVFGLISTIV-EVI 264
Query: 212 GKKETFGCLGIIYA 253
G + F + +IY+
Sbjct: 265 GFRCVFSTVAMIYS 278
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/83 (37%), Positives = 53/83 (63%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+ I +LG V AHH+F VG+D+D+RAYF +I+I +PT +K+F + + T +
Sbjct: 280 ILIAILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFE 339
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+ + F+F+F +G +TG+ L+N
Sbjct: 340 VYFVIMFIFMFLIGAVTGLFLSN 362
Score = 57.2 bits (132), Expect = 4e-07
Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF--TIFIG 683
IDI LHDTY+VV HFHYVLS + L L + Y+ + +F T+FIG
Sbjct: 365 IDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYLFWMFYFISTLFIG 422
Query: 684 VNITFFPQHFLG 719
N+ FFP H LG
Sbjct: 423 SNMLFFPMHSLG 434
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 90.6 bits (215), Expect = 4e-17
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = +1
Query: 307 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 486
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 487 GVILANS 507
G++LANS
Sbjct: 356 GIVLANS 362
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/70 (57%), Positives = 47/70 (67%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F +F GVN
Sbjct: 364 LDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHFGVMFTGVN 423
Query: 690 ITFFPQHFLG 719
+TFFPQHFLG
Sbjct: 424 LTFFPQHFLG 433
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 90.6 bits (215), Expect = 4e-17
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP FGIIS +
Sbjct: 213 AGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILPVFGIISEAVLFLT 272
Query: 212 GKKETFGCLGIIYAN 256
K FG + +A+
Sbjct: 273 DKDRLFGQTSMTFAS 287
Score = 87.0 bits (206), Expect = 4e-16
Identities = 40/80 (50%), Positives = 55/80 (68%)
Frame = +1
Query: 262 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 441
I +LG V HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P
Sbjct: 290 IAVLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWC 349
Query: 442 *RLGFVFLFTVGGLTGVILA 501
F+FLFTVGGL+G+IL+
Sbjct: 350 WTYSFIFLFTVGGLSGIILS 369
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/70 (45%), Positives = 39/70 (55%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFHY LS P G+S +S ++ F F+G N
Sbjct: 373 LDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVMMMAVFVCFFVGTN 432
Query: 690 ITFFPQHFLG 719
+TFFP HF G
Sbjct: 433 MTFFPMHFAG 442
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/84 (47%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPN 435
+I L+G +V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N
Sbjct: 262 SIALIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSL 321
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
++ F+ F +GG +G+IL+N+
Sbjct: 322 TFLQVSFIVSFAIGGTSGIILSNA 345
Score = 81.4 bits (192), Expect = 2e-14
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 38.7 bits (86), Expect = 0.15
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +3
Query: 438 FMKIRFCIFIHSRRINRCNFSQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YP 617
F+++ F + + S +D LHDTYYVVAHFH V++ Y
Sbjct: 323 FLQVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YY 379
Query: 618 LFTGLSLNSYILKIQFFTIFIGVNITFFP-QHFLG 719
L + LSL + + ++F+ + + F QHF G
Sbjct: 380 LSSYLSLPFSLPLSGYASLFVFSSFSVFALQHFQG 414
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 84.6 bits (200), Expect = 2e-15
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIG LGF+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N +
Sbjct: 295 VAIGFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTS 354
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+L +GF+ +F +GG++GV LA+
Sbjct: 355 MLYAIGFISMFIIGGISGVTLAS 377
Score = 76.6 bits (180), Expect = 6e-13
Identities = 38/74 (51%), Positives = 48/74 (64%)
Frame = +2
Query: 50 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 229
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS ++ +K F
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL-PTFSRKPIF 285
Query: 230 GCLGIIYAN*QLGY 271
G + Y+ +G+
Sbjct: 286 GYAFVAYSGVAIGF 299
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
I++ D+YYVVAH HYVL +P TG L+ + K QF+ + I N
Sbjct: 380 INVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERLGKWQFWLMLISFN 439
Query: 690 ITFFPQHFLG 719
+TFFP H G
Sbjct: 440 LTFFPMHLSG 449
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 84.2 bits (199), Expect = 3e-15
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = +2
Query: 47 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKET 226
++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+ILPGFGIIS ++S KE
Sbjct: 214 MVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIMILPGFGIISLLLSTYT-TKEM 272
Query: 227 FGCLGIIYA 253
FG +I A
Sbjct: 273 FGNQTMILA 281
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 334 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANS 507
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNA 367
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y-PLFTGLSLNSYILKIQFFTIFIGV 686
ID+ LHDT YVV HFH+VLS L G+ L++ + + I V
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISV 428
Query: 687 NITFFPQHFLG 719
+TF P HF G
Sbjct: 429 LLTFLPMHFTG 439
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 83.0 bits (196), Expect = 7e-15
Identities = 38/81 (46%), Positives = 57/81 (70%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
AI +LGF+V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + I
Sbjct: 323 AISVLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPI 382
Query: 439 L*RLGFVFLFTVGGLTGVILA 501
L LGF+ F++GG+TGV+LA
Sbjct: 383 LWTLGFMVTFSIGGMTGVLLA 403
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +2
Query: 35 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 214
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S ++S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 215 KKETFGCLGIIYAN 256
K+ FG +IYA+
Sbjct: 309 KR-LFGHKSMIYAS 321
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D LH++ +++AHFH + +P G LN + K F+ IG
Sbjct: 408 DYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKLGKASFWFWQIGFMF 467
Query: 693 TFFPQHFLG 719
F P + LG
Sbjct: 468 AFMPLYVLG 476
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 82.6 bits (195), Expect = 9e-15
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S I+ + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 218 KETFGCLGIIYAN*QLG 268
K FG ++Y+ +G
Sbjct: 319 K-LFGFKFVVYSTLAIG 334
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/82 (41%), Positives = 53/82 (64%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
LAIG+L F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+ ++
Sbjct: 331 LAIGVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAP 390
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+L +GFV F +GG+TGV LA
Sbjct: 391 MLFCIGFVQNFIIGGVTGVFLA 412
Score = 52.8 bits (121), Expect = 9e-06
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
ID+ LHDTYYVV HFH+++ +P+ TG + F+T +G N
Sbjct: 416 IDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRLAHAHFWTALVGSN 475
Query: 690 ITFFPQHFLG 719
TF +LG
Sbjct: 476 ATFLAMLWLG 485
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/75 (50%), Positives = 50/75 (66%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS +I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI-PVH 272
Query: 212 GKKETFGCLGIIYAN 256
+K FG I Y++
Sbjct: 273 ARKPIFGYRAIAYSS 287
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
LAI LG IV AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N
Sbjct: 288 LAISFLGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSA 347
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+L GF+ F +GGLTGV++A+
Sbjct: 348 MLFAFGFLSSFMIGGLTGVMVAS 370
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/69 (42%), Positives = 39/69 (56%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
DI +HDTY+VV HFHYVL + +P TG +N + ++ F FIG+N+
Sbjct: 374 DIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGMNL 433
Query: 693 TFFPQHFLG 719
TF P H LG
Sbjct: 434 TFMPMHELG 442
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/84 (44%), Positives = 60/84 (71%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AI ++G+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + +
Sbjct: 35 IAIAVVGYFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAA 94
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
+ F+ +F +GG+TG++LANS
Sbjct: 95 WY-VVAFLLMFLLGGVTGLVLANS 117
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ +HD+YYVVAHFHYVLS + + L +G +++L++Q + G
Sbjct: 119 VDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTT 178
Query: 690 ITFFPQHFLG 719
F+ H G
Sbjct: 179 CIFWGMHLSG 188
Score = 32.7 bits (71), Expect = 9.9
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 152 VYILILPGFGIISHIISQERGKKETFGCLGIIYA 253
VY++ILP FG++SH + G + LG++YA
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYA 33
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 80.2 bits (189), Expect = 5e-14
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+I+ + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 218 KETFGCLGIIYAN*QLG 268
+ FG ++Y+ +G
Sbjct: 350 R-LFGFKFVVYSTLAIG 365
Score = 69.7 bits (163), Expect = 7e-11
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
LAIG+L F V AHH+F G+D RA F + ++ IAVP+ +K F + T+ I
Sbjct: 362 LAIGVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTP 421
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+L +GFV F +GG+TGV LA+
Sbjct: 422 MLFSVGFVANFILGGVTGVFLAS 444
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ LH TYYVV HFHY++ +PL+TG + K+ F+ IG N
Sbjct: 447 VDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTLGKMHFWLSMIGTN 506
Query: 690 ITFFPQHFLG 719
ITFF LG
Sbjct: 507 ITFFAMILLG 516
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
AI +LGF V HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I
Sbjct: 322 AIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPI 381
Query: 439 L*RLGFVFLFTVGGLTGVILA 501
+ LGF+ F++GG+TGV+LA
Sbjct: 382 MWTLGFMITFSIGGMTGVLLA 402
Score = 67.7 bits (158), Expect = 3e-10
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S + S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 218 KETFGCLGIIYAN 256
+ FG +IYA+
Sbjct: 309 R-LFGHHSMIYAS 320
Score = 36.7 bits (81), Expect = 0.61
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D LH++ +V+AHFH V+ +P G +LN K F+ G +
Sbjct: 407 DFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYV 466
Query: 693 TFFPQHFLG 719
F P + LG
Sbjct: 467 AFMPLYALG 475
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 78.6 bits (185), Expect = 2e-13
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S I++
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTSLILTSII-H 273
Query: 218 KETFGCLGIIYAN*QLG 268
K+ FG G++Y +G
Sbjct: 274 KDIFGREGMMYCIISIG 290
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 250 C*LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINY 426
C ++IG++G+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F + T G
Sbjct: 285 CIISIGVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRG 344
Query: 427 NPNIL*RLGFVFLFTVGGLTGVILAN 504
N + F+ F GG TG++L++
Sbjct: 345 NNSSWSFFSFLICFCFGGFTGLLLSS 370
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/70 (32%), Positives = 31/70 (44%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTY+VV HFH VLS P+ S+ F + +G
Sbjct: 373 LDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFESFSFYHTFLLLVGAL 432
Query: 690 ITFFPQHFLG 719
+ F+P H G
Sbjct: 433 LVFYPMHLAG 442
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 78.6 bits (185), Expect = 2e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +1
Query: 262 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 441
IG LGF+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L
Sbjct: 288 IGFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAML 347
Query: 442 *RLGFVFLFTVGGLTGVILA 501
+ F+ F +GG+TGV+LA
Sbjct: 348 YAVSFIPSFVLGGVTGVMLA 367
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/77 (42%), Positives = 51/77 (66%)
Frame = +2
Query: 41 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 220
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S +I +K
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI-PVFARK 273
Query: 221 ETFGCLGIIYAN*QLGY 271
FG +++A +G+
Sbjct: 274 RLFGYSSMVFAIVLIGF 290
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D HDTY+VVAHFHYV+ +P G L+ + KI F FIG ++
Sbjct: 372 DYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETMGKISFVLFFIGFHL 431
Query: 693 TFFPQHFLG 719
TFF QHF+G
Sbjct: 432 TFFIQHFVG 440
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS +I
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/82 (41%), Positives = 55/82 (67%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AI LLG+ V AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N +
Sbjct: 296 VAIVLLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTS 355
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+ + F+ F +GGLTG++ A
Sbjct: 356 LHFAVAFLLQFVIGGLTGIMFA 377
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/75 (44%), Positives = 40/75 (53%)
Frame = +3
Query: 495 FSQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTI 674
F+ ID L DTY+VVAHFHYVL +P TG LN I +QF+
Sbjct: 376 FAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERIGILQFWLW 435
Query: 675 FIGVNITFFPQHFLG 719
+G N+TF QHFLG
Sbjct: 436 VLGFNMTFMVQHFLG 450
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/38 (89%), Positives = 36/38 (94%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 145
AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 122 AGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
Score = 57.6 bits (133), Expect = 3e-07
Identities = 36/94 (38%), Positives = 42/94 (44%)
Frame = +3
Query: 396 SYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFIDITLHDTYYVVAHFHYVLSXX 575
SY + N N P FM IH + + DI LHDTYYVVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 576 XXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 677
+PLFTGL+L I F I+
Sbjct: 303 AVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 653 KNSIFYNIYWSKYNIFSTT 709
KN+IF IYWSK+NIFS+T
Sbjct: 328 KNTIFSYIYWSKFNIFSST 346
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 77.8 bits (183), Expect = 3e-13
Identities = 37/80 (46%), Positives = 54/80 (67%)
Frame = +1
Query: 262 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 441
IG +GF V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L
Sbjct: 299 IGFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAML 358
Query: 442 *RLGFVFLFTVGGLTGVILA 501
+GF+ FT+GGL+G + A
Sbjct: 359 FAIGFIASFTIGGLSGFMHA 378
Score = 70.5 bits (165), Expect = 4e-11
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS +I +
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI-PVHAR 283
Query: 218 KETFGCLGIIYAN*QLGY 271
K FG ++++ +G+
Sbjct: 284 KMLFGYSVMVFSTALIGF 301
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/69 (37%), Positives = 33/69 (47%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D HDTY+VVAHFHYVL + +P G L+ + + F IF G +
Sbjct: 383 DAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHT 442
Query: 693 TFFPQHFLG 719
FP H LG
Sbjct: 443 FAFPFHILG 451
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S II
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII-PVF 217
Query: 212 GKKETFGCLGIIYA 253
++ FG +++A
Sbjct: 218 ARRPLFGYTSMVFA 231
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
AI + F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +
Sbjct: 234 AITAVSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQM 293
Query: 439 L*RLGFVFLFTVGGLTGVIL 498
L LG VF+F +GGLTG+ L
Sbjct: 294 LYALGGVFMFLIGGLTGLPL 313
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
ID+ + D+ +VV HFHYVL + +PL TG + K+ F+ IF G N
Sbjct: 318 IDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENLGKLSFWLIFAGAN 377
Query: 690 ITFFPQHFLG 719
I +F Q G
Sbjct: 378 IFYFLQMVAG 387
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 77.0 bits (181), Expect = 5e-13
Identities = 36/72 (50%), Positives = 50/72 (69%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP G++S I++ +
Sbjct: 221 ASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLPAVGMVSSIVATFT-Q 279
Query: 218 KETFGCLGIIYA 253
+ FG L ++ A
Sbjct: 280 RPVFGYLAMVMA 291
Score = 66.1 bits (154), Expect = 9e-10
Identities = 32/83 (38%), Positives = 54/83 (65%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+A G+L F + HH+F G+ ++FT++++ IAVP G++IF LATI + +
Sbjct: 293 IATGVLAFGLWVHHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTP 352
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
L +GF+ +F +GGLTGV++A+
Sbjct: 353 FLFVIGFIVVFVIGGLTGVMVAS 375
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D +HDTY+VVAHFHYVL +P TG ++ + + F IF G N+
Sbjct: 379 DTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFNL 438
Query: 693 TFFPQHFLG 719
TFFP H LG
Sbjct: 439 TFFPMHILG 447
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 76.6 bits (180), Expect = 6e-13
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +2
Query: 35 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S +++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA-TY 287
Query: 212 GKKETFGCLGIIYAN 256
+K FG + Y++
Sbjct: 288 SRKNIFGYRAVAYSS 302
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
L I +GF HH+F G F T+I+ V T IK+F + T++ + +
Sbjct: 303 LGIAFVGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTP 362
Query: 436 IL*RLGFVFLFTVGGLTGVIL 498
GF+F GG+TG+ L
Sbjct: 363 FAYFCGFLFFTVFGGMTGIAL 383
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ HDTY+VVAHFH+++ +P G + + + I +G N
Sbjct: 388 LDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGWGLVAAALIILGFN 447
Query: 690 ITFFPQHFLG 719
TF PQ LG
Sbjct: 448 ATFIPQFLLG 457
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 76.2 bits (179), Expect = 8e-13
Identities = 38/73 (52%), Positives = 49/73 (67%)
Frame = +2
Query: 50 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 229
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S II +K F
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII-PVFSRKPMF 292
Query: 230 GCLGIIYAN*QLG 268
G +G+I+A +G
Sbjct: 293 GYVGLIFATLSIG 305
Score = 60.5 bits (140), Expect = 4e-08
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
L+IG L V AHH+F G + +F+ T +I+VPTG+K F + T+ I +
Sbjct: 302 LSIGALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETP 359
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
++ +GF+ F GGLTG++LA+
Sbjct: 360 MIWSVGFMATFLFGGLTGIMLAS 382
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D L D+Y+++AHFHY L +P TG ++ + KI F+ F+G +
Sbjct: 385 LDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFH 444
Query: 690 ITFFPQHFLG 719
TF QH++G
Sbjct: 445 GTFLIQHWVG 454
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 74.9 bits (176), Expect = 2e-12
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 196
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S +
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 197 ISQERGKKETFGCLGI 244
I Q ++ +G I
Sbjct: 268 I-QRMARRRAYGYTAI 282
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AI + F V HH+FT D R AT+ +A+P+G+K+F +AT++G +I
Sbjct: 287 VAIASISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAP 346
Query: 436 IL*RLGFVFLFTVGGLTGV 492
+L L F+ F VGG+TGV
Sbjct: 347 MLFMLTFLLFFIVGGVTGV 365
Score = 39.5 bits (88), Expect = 0.086
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +3
Query: 429 P*YFMKIRFCIFIHSRRINRCNFSQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 608
P FM + F +F + F +D+ LHDTY+V+ HFHY+++
Sbjct: 346 PMLFM-LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY 404
Query: 609 *YPLFTGLSLNSYILKIQFFTIFIGVNITF 698
+P TG + + +I + I +G T+
Sbjct: 405 -FPHLTGRWYDERLARISWALITVGGFATY 433
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 74.1 bits (174), Expect = 3e-12
Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 10/79 (12%)
Frame = +2
Query: 47 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 196
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 197 ISQERGKKETFGCLGIIYA 253
IS +K FG +++A
Sbjct: 298 IS-THARKNIFGYRMMVWA 315
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIG L F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ I+
Sbjct: 317 VAIGALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVP 376
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+L LGF+ F GGLTG+ L N
Sbjct: 377 MLFALGFIITFVNGGLTGLFLGN 399
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/70 (38%), Positives = 37/70 (52%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ L DT +VVAHFH V+ + YP TG LN + K F+ F+G
Sbjct: 402 VDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAY 461
Query: 690 ITFFPQHFLG 719
+ FFP H+LG
Sbjct: 462 LIFFPMHYLG 471
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEVY+LI+P FG I+ I+ +
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEVYVLIIPTFGFINMIVPHNNTR 425
Query: 218 K 220
+
Sbjct: 426 R 426
Score = 50.8 bits (116), Expect = 4e-05
Identities = 23/78 (29%), Positives = 46/78 (58%)
Frame = +1
Query: 271 LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RL 450
+G++V HH++ VG+D +R +++ TI+I++P IK+ ++ + + L +
Sbjct: 443 MGYLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSM 502
Query: 451 GFVFLFTVGGLTGVILAN 504
F+ LF V G TG+ L++
Sbjct: 503 SFLLLFLVAGFTGMWLSH 520
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +3
Query: 498 SQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 677
S +++++HDT+YVVAHFH +LS + G+ + +
Sbjct: 519 SHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMFGYMHLIYYS 578
Query: 678 IGVNITFFPQHFLG 719
G + F PQ +LG
Sbjct: 579 GGQWVAFVPQFYLG 592
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/66 (50%), Positives = 42/66 (63%)
Frame = +2
Query: 35 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 214
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S +
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFSELF-PVYA 288
Query: 215 KKETFG 232
+K FG
Sbjct: 289 RKPLFG 294
Score = 58.0 bits (134), Expect = 2e-07
Identities = 38/122 (31%), Positives = 59/122 (48%)
Frame = +1
Query: 136 FWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLC*LAIGLLGFIV*AHHIFTVGI 315
F++ ++Y ++ FS F +K F + I L IV AHH+F G
Sbjct: 263 FYSHPAVYVLVLPVFGIFSELFPVYARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGT 322
Query: 316 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 495
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+
Sbjct: 323 PNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVM 382
Query: 496 LA 501
LA
Sbjct: 383 LA 384
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
IDI + +TY+VVAHFHYV+ + +P FTG + K+ F FIG
Sbjct: 388 IDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGAT 447
Query: 690 ITFFPQHFLG 719
+ + P H+ G
Sbjct: 448 LNWLPLHWAG 457
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/82 (40%), Positives = 54/82 (65%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AI +L F+V HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++
Sbjct: 317 IAISVLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTP 376
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+L L F+ F +GG+TGV+LA
Sbjct: 377 MLWALAFIPNFVIGGVTGVMLA 398
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IIS +
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS-SFAR 303
Query: 218 KETFG 232
K+ FG
Sbjct: 304 KQLFG 308
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/69 (43%), Positives = 36/69 (52%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D H+TY++V+HFHYVL YP G LN I K F+ IG NI
Sbjct: 403 DYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERIGKWFFWIFMIGFNI 462
Query: 693 TFFPQHFLG 719
FFPQ+FLG
Sbjct: 463 CFFPQYFLG 471
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 289 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT-QINYNPNIL*RLGFVFL 465
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 466 FTVGGLTGVILANS 507
FT+GG TGV++ N+
Sbjct: 62 FTLGGTTGVVMGNA 75
Score = 44.0 bits (99), Expect = 0.004
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLN--------SYILKIQF 665
+DI LHDTYY+VAHFH+VLS G +LN S L I F
Sbjct: 77 MDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNLFHVNTGSSPYLNIWF 136
Query: 666 FTIFIGVNITFFPQHFLG 719
+ + F P H LG
Sbjct: 137 VVFLASIMLIFLPMHILG 154
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 130
AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 186 AGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/83 (38%), Positives = 54/83 (65%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++I L F+V HH FT+G A F A+++I +PTG+KI+ + T+ +I ++
Sbjct: 341 ISIAFLSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVP 400
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
++ L F+FLF +GG+TG++LAN
Sbjct: 401 MIYSLAFIFLFVIGGITGIMLAN 423
Score = 59.7 bits (138), Expect = 8e-08
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +2
Query: 50 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 229
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S I S G K F
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSG-KVLF 331
Query: 230 GCLGIIYAN*QLGY 271
G +++A + +
Sbjct: 332 GYKSLVWATISIAF 345
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/84 (42%), Positives = 52/84 (61%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQER 211
AG + L +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S ++ +
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL-PKM 259
Query: 212 GKKETFGCLGIIYAN*QLGY*DSL 283
++E FG I ++ + + +L
Sbjct: 260 ARREIFGYTAIALSSIAIAFLSAL 283
Score = 53.6 bits (123), Expect = 5e-06
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +1
Query: 256 LAIGLLGFI-V*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 432
+AI L + V HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y
Sbjct: 275 IAIAFLSALGVWMHHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKT 334
Query: 433 NIL*RLGFVFLFTVGGLTGV 492
+ + F+ +F +GG+TGV
Sbjct: 335 PTILLISFIVMFLLGGITGV 354
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 130
AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 203 AGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 69.7 bits (163), Expect = 7e-11
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
AIG + + V HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +
Sbjct: 341 AIGGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPM 400
Query: 439 L*RLGFVFLFTVGGLTGVILA 501
L LG +FL VGGLTG++LA
Sbjct: 401 LWALGALFLLLVGGLTGMMLA 421
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II +
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII-PTFAE 326
Query: 218 KETFGCLGIIYAN*QLG 268
K FG ++ A +G
Sbjct: 327 KPLFGYATMVIATFAIG 343
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 69.3 bits (162), Expect = 9e-11
Identities = 32/83 (38%), Positives = 57/83 (68%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+AIG +GF + HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 299 VAIGFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATP 358
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+L LGF +F +GGL+GV++A+
Sbjct: 359 LLHVLGFFLIFIIGGLSGVMVAS 381
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D+ HDTY+VVAHFHYVL YP FTG ++ + K+ F+ F G N+
Sbjct: 385 DMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNL 444
Query: 693 TFFPQHFLG 719
TFFP H LG
Sbjct: 445 TFFPMHKLG 453
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S II +
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSIIITFT-Q 285
Query: 218 KETFGCLGIIYAN*QLGY 271
+ FG + I+ + +G+
Sbjct: 286 RPIFGYIPIVLSIVAIGF 303
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 202
A +LL DR+ T FF GGGDPIL+QHLF FGHPEVYI+ILP +GI+ ++S
Sbjct: 238 AALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVYIMILPAWGILGDVLS 297
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/97 (27%), Positives = 50/97 (51%)
Frame = +1
Query: 214 KKRNFWLFRNNLC*LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR* 393
+K + W + + +L +V HH+F G+ F T++I++P+ + +
Sbjct: 301 RKPHHWYRGTVWAMVLVTVLSAMVYGHHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNW 360
Query: 394 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 504
+ T+ + Y+ +L LG VF+F VGGLTG+ L +
Sbjct: 361 VLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGD 397
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ LHDT +VV HFH+ ++ +P G L + KI F+ F+G+
Sbjct: 400 MDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERLGKIHFWFTFLGLT 459
Query: 690 ITFFPQHFLG 719
+ F Q G
Sbjct: 460 LVFGGQLLAG 469
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/71 (47%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Frame = +1
Query: 298 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 471
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 472 VGGLTGVILAN 504
GG TGVIL N
Sbjct: 60 FGGTTGVILGN 70
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSL-NSYILKIQFFTIFIGV 686
ID+ LHDTYYV+AHFH+VLS F G +L + I+ + F+GV
Sbjct: 73 IDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENTIIVLWSILFFVGV 132
Query: 687 NITFFPQHFLG 719
+TF P HFLG
Sbjct: 133 VLTFLPMHFLG 143
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/82 (41%), Positives = 52/82 (63%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+ I +LG +V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++
Sbjct: 287 MGIVVLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTP 346
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+ LGF+F F +GG+TGV+L+
Sbjct: 347 LYWVLGFIFNFLLGGITGVMLS 368
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/72 (38%), Positives = 47/72 (65%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ + S +
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS-TFAR 273
Query: 218 KETFGCLGIIYA 253
K FG +++A
Sbjct: 274 KPLFGYRQMVWA 285
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/70 (32%), Positives = 35/70 (50%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D HD+Y+VVAHFH VL +P TG + + ++ F+ +G
Sbjct: 372 LDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYL 431
Query: 690 ITFFPQHFLG 719
+TF PQ+ LG
Sbjct: 432 LTFLPQYALG 441
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/81 (44%), Positives = 50/81 (61%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
LAI L+ IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 295 LAIVLVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMP 354
Query: 436 IL*RLGFVFLFTVGGLTGVIL 498
+GF+F F +GG+TGV L
Sbjct: 355 TYWLIGFIFNFLIGGITGVSL 375
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +2
Query: 68 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGII 247
L S F+P GG P+LYQ F F+ HP VY+++LP GI + + S +K FG ++
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGIGAEVAS-TMARKPLFGYRVMV 291
Query: 248 YA 253
Y+
Sbjct: 292 YS 293
Score = 41.9 bits (94), Expect = 0.016
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +3
Query: 531 TYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQH 710
+YYVVAHFH V+ +P TG L+ + F+ IG +TF PQ+
Sbjct: 387 SYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQY 446
Query: 711 FLG 719
LG
Sbjct: 447 ILG 449
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = -1
Query: 129 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNK 4
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSK 41
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/58 (56%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Frame = +2
Query: 47 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ +IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/79 (30%), Positives = 47/79 (59%)
Frame = +1
Query: 268 LLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 447
++ F+V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L
Sbjct: 289 IISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFA 348
Query: 448 LGFVFLFTVGGLTGVILAN 504
+G + F +GG TGV L +
Sbjct: 349 VGALLNFIIGGSTGVYLGS 367
Score = 46.8 bits (106), Expect = 6e-04
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
ID TY+VVAHFHY+L +P TG + + + KI F +GV
Sbjct: 370 IDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERLGKIHFALAMLGVA 429
Query: 690 ITFFPQHFL 716
+TF PQ L
Sbjct: 430 LTFLPQFAL 438
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/84 (39%), Positives = 51/84 (60%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
L I +L FIV AHH+F G++ + F T+IIAVP+ +K F + T+ I + P
Sbjct: 339 LGIAVLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPA 398
Query: 436 IL*RLGFVFLFTVGGLTGVILANS 507
++ +G V +F GG+TG+IL N+
Sbjct: 399 MMFSIGLVSMFISGGVTGIILGNN 422
Score = 62.9 bits (146), Expect = 8e-09
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 10/80 (12%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFGHPEVYILILPGFGII 187
A +L+ DR+L TSFF AG GG P+L+QHLF F GHPEVYI+++P GI
Sbjct: 257 AALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLGHPEVYIVLIPALGIT 316
Query: 188 SHIISQERGKKETFGCLGII 247
S +I+ +K FG +I
Sbjct: 317 SEVIA-TNARKPIFGYKAMI 335
Score = 59.7 bits (138), Expect = 8e-08
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI LHDTYYVVAHFH V+ + +P G ++ + I F+ F+G
Sbjct: 424 MDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAY 483
Query: 690 ITFFPQHFLG 719
+ FFP H++G
Sbjct: 484 LVFFPMHYIG 493
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 66.9 bits (156), Expect = 5e-10
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
AI LGFIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N
Sbjct: 330 AIASLGFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVT 389
Query: 439 L*RLGFVFLFTVGGLTGVILA 501
L + F+ +F VGGL+G+ +A
Sbjct: 390 LNCIAFLSMFIVGGLSGIFMA 410
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/70 (41%), Positives = 37/70 (52%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ HDTY++VAHFHY+L +P G +N + K F FIG N
Sbjct: 414 VDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKLGKTHFVLTFIGAN 473
Query: 690 ITFFPQHFLG 719
TFFP HFLG
Sbjct: 474 GTFFPMHFLG 483
Score = 53.2 bits (122), Expect = 7e-06
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +2
Query: 95 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYA 253
GGG P+L+QHLF F+ HP VYI++LP G++S ++S +K FG ++++
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFS 327
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +1
Query: 271 LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RL 450
LGFIV HH+F G++ F AT++IA+P+ +K F L T++G ++ + +L L
Sbjct: 331 LGFIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFAL 390
Query: 451 GFVFLFTVGGLTGVILA 501
FV +F +GGL+G+ +A
Sbjct: 391 SFVSMFVIGGLSGIFMA 407
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Frame = +2
Query: 47 ILLTDRNLNTSFFDP-----------AGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 193
++L DR + T FF P AGGG P+L+QHLF F+ HP VYI+ILP G++S
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYSHPAVYIMILPAMGMVSD 305
Query: 194 IISQERGKKETFGCLGIIYA 253
I++ +K FG ++Y+
Sbjct: 306 ILAC-FSRKPIFGYKPMVYS 324
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/70 (41%), Positives = 36/70 (51%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+DI +HDTY++VAHFHYVL +P G +N KI F FI +N
Sbjct: 411 VDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLN 470
Query: 690 ITFFPQHFLG 719
TFF H LG
Sbjct: 471 GTFFTMHILG 480
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/85 (37%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY--- 426
+ G F + HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ +
Sbjct: 303 IGTGFFSFGLWVHHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRIT 362
Query: 427 NPNIL*RLGFVFLFTVGGLTGVILA 501
P++ LGF+F+FTVGG+TGV++A
Sbjct: 363 TPSLF-VLGFLFIFTVGGVTGVMVA 386
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVSMIV 284
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/70 (41%), Positives = 38/70 (54%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
ID +HDTY+VVAHFHYVL P F+ L+ + + F+ +FIG N
Sbjct: 390 IDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLSERLGRWVFWLMFIGFN 449
Query: 690 ITFFPQHFLG 719
+TFFP H G
Sbjct: 450 VTFFPMHMAG 459
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/56 (51%), Positives = 40/56 (71%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++ ++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMMYEMV 260
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D T HDTY+VV HFH + +P TG N + KI F F+G
Sbjct: 364 LDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAV 423
Query: 690 ITFFPQHFLG 719
+ FF QH LG
Sbjct: 424 LLFFTQHILG 433
Score = 40.3 bits (90), Expect = 0.049
Identities = 20/78 (25%), Positives = 39/78 (50%)
Frame = +1
Query: 268 LLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*R 447
++GF AHH+F G+ + F T+ + + +F +AT+ +I ++ ++
Sbjct: 283 IVGFSSWAHHMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWS 342
Query: 448 LGFVFLFTVGGLTGVILA 501
+G + LF G GV+ A
Sbjct: 343 IGGIALFFSAGAGGVLNA 360
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS ++ +
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVVC-AFSR 282
Query: 218 KETFGCLGIIYAN 256
K FG + Y++
Sbjct: 283 KNIFGYKAVAYSS 295
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
L I +GF HH+FT G F ++ + + T IK+F AT++ I +
Sbjct: 296 LGIAFVGFFTWGHHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATP 355
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
GF+F GG+TG+ LA
Sbjct: 356 FAYFAGFLFFLVFGGMTGIALA 377
Score = 46.4 bits (105), Expect = 8e-04
Identities = 22/70 (31%), Positives = 32/70 (45%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D+ HDTY++VAHFH+++ +P G L + I +G N
Sbjct: 381 LDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGWGLVAAVMIILGFN 440
Query: 690 ITFFPQHFLG 719
TF PQ LG
Sbjct: 441 FTFIPQFLLG 450
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 190
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVS 291
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+A L+GF V HH+F GI A+F +A+++I++P+ + +F +ATI + +
Sbjct: 313 VATMLIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTP 372
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
L GFV +F VGG++GV+ A
Sbjct: 373 FLYFAGFVLMFVVGGVSGVMTA 394
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/70 (38%), Positives = 36/70 (51%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D L DTY+VVAH HYVL +P FTG +N K+ F+ + +G N
Sbjct: 398 LDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFN 457
Query: 690 ITFFPQHFLG 719
+ FFP H G
Sbjct: 458 LGFFPMHISG 467
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 11/65 (16%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 184
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 185 ISHII 199
+SHI+
Sbjct: 302 VSHIL 306
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++IG L ++V HH+F G++ + F+ T+II +P + L +++G+++ N
Sbjct: 325 ISIGFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSA 384
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
L LGF+ +F GG++G LA
Sbjct: 385 SLFALGFISMFVSGGVSGFFLA 406
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/70 (40%), Positives = 35/70 (50%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
IDI LH TY+VV HFH V+ +P TG +N + KI F+ FIG
Sbjct: 410 IDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAY 469
Query: 690 ITFFPQHFLG 719
F P H+LG
Sbjct: 470 CIFMPFHYLG 479
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/82 (36%), Positives = 52/82 (63%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
++I +L F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI + +
Sbjct: 316 ISITVLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDIL 375
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+ F+ +F++GG +GVIL+
Sbjct: 376 FFWFISFIIIFSIGGFSGVILS 397
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +2
Query: 50 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETF 229
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IIS K F
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIISY-ICVKSVF 306
Query: 230 GCLGIIYA 253
+ +IYA
Sbjct: 307 SYISLIYA 314
Score = 37.1 bits (82), Expect = 0.46
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPL-FTGLSLNSYILKIQFFTIF--I 680
+D H++ +++AHFH V+ Y L + LN+ K F +F I
Sbjct: 401 LDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCELNN---KFNFNILFWLI 457
Query: 681 GVNITFFPQHFLG 719
GV +TFFP +FLG
Sbjct: 458 GVILTFFPFYFLG 470
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 64.5 bits (150), Expect = 3e-09
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = +1
Query: 121 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLC 252
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLC
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLC 45
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 64.1 bits (149), Expect = 4e-09
Identities = 28/46 (60%), Positives = 35/46 (76%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 169
+ IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I++L
Sbjct: 204 SAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATIIML 249
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 63.7 bits (148), Expect = 5e-09
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Frame = +1
Query: 262 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 441
+G +V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+
Sbjct: 20 LGAYSNVVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIV 79
Query: 442 -*RLGFVFLFTVGGLTG 489
+GF+FLFT+GG G
Sbjct: 80 WWIIGFIFLFTMGGRQG 96
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/54 (51%), Positives = 37/54 (68%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S I+
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVSMIV 343
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Frame = +1
Query: 271 LGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGT---QINYNPNI 438
L F + HH+FT GI + ++F +A+ +A+P+G+++F +AT G ++
Sbjct: 367 LSFGLWVHHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPT 426
Query: 439 L*RLGFVFLFTVGGLTGVILA 501
L LGF+F+F +GGLTGV++A
Sbjct: 427 LFILGFLFIFVLGGLTGVMVA 447
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D HD+Y++VAH HYVL P + +L+ + + F +F+G NI
Sbjct: 452 DWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQALSERLGRWVFGLMFVGFNI 511
Query: 693 TFFPQHFLG 719
TFFP HF G
Sbjct: 512 TFFPMHFTG 520
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.9 bits (146), Expect = 8e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +2
Query: 47 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ ++ GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
Score = 62.9 bits (146), Expect = 8e-09
Identities = 30/82 (36%), Positives = 54/82 (65%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+ + L F + AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+ +
Sbjct: 319 VTMSFLSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVP 378
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+ LGF+F+F +GG+TGV++A
Sbjct: 379 MHFILGFLFIFVLGGMTGVMVA 400
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/69 (34%), Positives = 34/69 (49%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
++ HD+Y+VVAH HYVL P FTG ++ + K F+ +F G N+
Sbjct: 405 NLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFWLMFSGFNL 464
Query: 693 TFFPQHFLG 719
FF H G
Sbjct: 465 AFFMMHLTG 473
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 142
+ +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 204 SAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 169
A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+ L
Sbjct: 209 AAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +1
Query: 196 YFTRKRKKRNFWLFRNNLC*LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 375
Y K FW +C + +G V HH+FTVG+D++T +F+S T+II VPTG
Sbjct: 21 YVKNKYVSSCFWFLWFVVCYVFNMCMGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTG 80
Query: 376 IKIFR*LATIHGTQINYNPNIL 441
IK+F L + +++N IL
Sbjct: 81 IKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +2
Query: 59 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV 300
Score = 56.4 bits (130), Expect = 7e-07
Identities = 28/79 (35%), Positives = 49/79 (62%)
Frame = +1
Query: 265 GLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL* 444
G L F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L
Sbjct: 322 GFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLW 381
Query: 445 RLGFVFLFTVGGLTGVILA 501
G + +FT GGLTGV++A
Sbjct: 382 IAGGLAVFTAGGLTGVMVA 400
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D +HDTY++VAH HY L YP+ T +L+ + + F+ +F G N+
Sbjct: 405 DWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERLGRWSFWLLFTGFNV 464
Query: 693 TFFPQHFLG 719
TF P H G
Sbjct: 465 TFLPMHLTG 473
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 60.9 bits (141), Expect = 3e-08
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +2
Query: 38 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 202
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ I++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 59.7 bits (138), Expect = 8e-08
Identities = 30/80 (37%), Positives = 47/80 (58%)
Frame = +1
Query: 262 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 441
I LL V HH++ G+ R T++I++P G+ + + T++G I++ +L
Sbjct: 280 IVLLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPML 339
Query: 442 *RLGFVFLFTVGGLTGVILA 501
LGF+FLF +GGLTGV LA
Sbjct: 340 YALGFIFLFLIGGLTGVPLA 359
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 510 IDITLH--DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIG 683
+ +T+H +TYYVV HFHYV++ +P TG N I K F+ F+G
Sbjct: 361 VSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVG 420
Query: 684 VNITFF 701
VNI F+
Sbjct: 421 VNIVFW 426
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +2
Query: 47 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/82 (36%), Positives = 51/82 (62%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+A+G+L F + HH+FT GI A+F++A+ ++AVPT +++F + T+ +
Sbjct: 293 VALGVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLP 352
Query: 436 IL*RLGFVFLFTVGGLTGVILA 501
+L L F F +GGLTGV++A
Sbjct: 353 MLWLLAFFATFVIGGLTGVMVA 374
Score = 41.9 bits (94), Expect = 0.016
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D +HDTY++VAH HYVL P FTG + F+ + IG +
Sbjct: 379 DWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNLGPTAFWLVVIGFHG 438
Query: 693 TFFPQHFLG 719
TF H+ G
Sbjct: 439 TFLLLHWAG 447
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 60.5 bits (140), Expect = 4e-08
Identities = 27/48 (56%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH--PEVYILIL 169
A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG P + I+I+
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGQIWPIIIIIII 268
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +2
Query: 47 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS I+
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAISTIL 274
Score = 54.4 bits (125), Expect = 3e-06
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNP 432
+++ +L F + HH+FT GI A F++A+ ++AVPT +++F + T+ GT P
Sbjct: 293 ISLAVLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP 352
Query: 433 NIL*RLGFVFLFTVGGLTGVILA 501
++ L F F +GGLTGV++A
Sbjct: 353 -MMWILAFFATFVIGGLTGVMVA 374
Score = 40.3 bits (90), Expect = 0.049
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D +HDT+++VAH HYVL P TG + + F+ + +G +
Sbjct: 379 DWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFRVGDVAFWLVTVGFHA 438
Query: 693 TFFPQHFLG 719
TF H++G
Sbjct: 439 TFLAVHWVG 447
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 411
LAI LG +V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 42 LAIVCLGSVVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/40 (55%), Positives = 26/40 (65%)
Frame = +2
Query: 134 FFGHPEVYILILPGFGIISHIISQERGKKETFGCLGIIYA 253
FFGHPEVY+LILP FGI+SHI FG G++ A
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLA 40
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +1
Query: 262 IGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 441
+ L F+V HH+F GI++ + F + TI I++P + +F + T+ ++ + L
Sbjct: 301 VALQSFVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFL 360
Query: 442 *RLGFVFLFTVGGLTGVIL 498
LG + LF +GG+TGV L
Sbjct: 361 FSLGALILFIIGGITGVFL 379
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVN 689
+D TY+VVAHFHYV+ YP TG N + KIQF F+G N
Sbjct: 384 LDYQFRGTYWVVAHFHYVMVAGATALFGGLYYW-YPKITGKMYNETLGKIQFGVYFLGFN 442
Query: 690 ITFFP 704
+ +FP
Sbjct: 443 LLYFP 447
Score = 46.4 bits (105), Expect = 8e-04
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Frame = +2
Query: 38 AITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 184
A+ IL +D L T++F D G +L+ HLF FFGHPEVYI+ P G+
Sbjct: 216 ALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLFWFFGHPEVYIVFFPALGV 275
Query: 185 ISHIISQERGKK 220
++ G++
Sbjct: 276 MAECFQTFTGRR 287
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/47 (57%), Positives = 29/47 (61%)
Frame = +1
Query: 4 FIIIITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 144
FI TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 106 FITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +1
Query: 298 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 387
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 53.2 bits (122), Expect = 7e-06
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 184
A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V ILI GI
Sbjct: 221 AAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLILIWLTSGI 268
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 169
AG IT+LL+DRN N FF GG PIL+Q++ FGH +V LIL
Sbjct: 36 AGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFLIL 81
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +3
Query: 498 SQFFIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIF 677
S ID +H YYVVAHFHY + +P FTG + + +I + +
Sbjct: 387 SSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAY 446
Query: 678 IGVNITFFPQHFL 716
GVNI +FP FL
Sbjct: 447 PGVNILYFPMFFL 459
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +2
Query: 35 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 202
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
Score = 34.3 bits (75), Expect = 3.3
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +1
Query: 259 AIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 438
AI + +V HH F GI + T I++PT + I +AT+ G + + I
Sbjct: 307 AISVDSVMVFLHHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPI 366
Query: 439 L*RLGFVFLFTVGGLTGV 492
L L F +GG++GV
Sbjct: 367 LFALAASTSFMIGGVSGV 384
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +1
Query: 319 IDTRAYFTSATIIIAVPTGIKIFR*LAT 402
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +2
Query: 584 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRLA 724
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF ++
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSIS 137
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +1
Query: 7 IIIITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 132
III++TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 93 IIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +2
Query: 584 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFF 715
CNY IY L+ + F K KNSI+ NIY SK NIFS TFF
Sbjct: 91 CNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFF 134
Score = 34.3 bits (75), Expect = 3.3
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +3
Query: 384 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 506
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 510 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSY-ILKIQFFTIFIGV 686
+D T+H+T ++ HFH + + + +P TG +L +++ Q + FIG+
Sbjct: 353 LDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHLTGRALTHVRLMRWQLWLWFIGM 412
Query: 687 NITFFPQHFLG 719
+T FP H++G
Sbjct: 413 IVTTFPWHWVG 423
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = -2
Query: 413 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQTMNPN 270
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT P+
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQTTLPS 98
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/69 (31%), Positives = 31/69 (44%)
Frame = +3
Query: 513 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFFTIFIGVNI 692
D+ LH+TY+V+AHFH +P TG +N + K + F+ N
Sbjct: 455 DLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFWGKFHAWWSFVFFNC 514
Query: 693 TFFPQHFLG 719
TFFP G
Sbjct: 515 TFFPMFIAG 523
Score = 40.7 bits (91), Expect = 0.037
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +1
Query: 256 LAIGLLGFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 435
+ + + G + HH FT D + T T +++PTG + TI G ++ N
Sbjct: 370 VGVSMSGAMSGVHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAA 428
Query: 436 IL*RLGFVFLFTVGGLTGVILAN 504
+L L + F +GGLTG+ A+
Sbjct: 429 VLLVLMAMMNFLIGGLTGIFNAD 451
Score = 36.7 bits (81), Expect = 0.61
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 77 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 199
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 654 KIQFFTIFIGVNITFFPQHFLG 719
KI F +F+GVN+TFFPQHFLG
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLG 421
Score = 38.3 bits (85), Expect = 0.20
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2
Query: 32 AGAITILLTDRNLNTSFFDP 91
A IT+LLTDRNLNT+FFDP
Sbjct: 192 AAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 39.1 bits (87), Expect = 0.11
Identities = 27/77 (35%), Positives = 37/77 (48%)
Frame = +1
Query: 19 TTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYY 198
TT S S +N N SKL++I+ S PN I ILI T L+ N T I ++
Sbjct: 103 TTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNSTSIRNRITHL 162
Query: 199 FTRKRKKRNFWLFRNNL 249
+K N ++NNL
Sbjct: 163 HNIFSQKSNILYYKNNL 179
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 486 RCNFSQFFIDITLHDTYYVVAHFHYV 563
R SQ D T HDTYYVVAH HY+
Sbjct: 28 RIALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 98 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 214
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 2.5
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 146 PEVYILILPGFGIISHIISQERGKK 220
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 2.5
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 104 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 217
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_A1ZLX9 Cluster: Membrane protein, putative; n=1;
Microscilla marina ATCC 23134|Rep: Membrane protein,
putative - Microscilla marina ATCC 23134
Length = 480
Score = 34.3 bits (75), Expect = 3.3
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +1
Query: 1 IFIIIITTCFSWSYYNIINRSKLKYIIF*SCWRRRPNF-ISTFILIFWTS*SLYFN-FTR 174
++II++TT F W +Y +IN + + +++P F + I IFW + +FN T
Sbjct: 98 VYIILLTTLFIWVFYRLINTIQQTLNL-----QKQPWFNLQLSIFIFWVLFNSFFNPSTY 152
Query: 175 IWYNFS--YYFT 204
W S Y FT
Sbjct: 153 FWVTASVGYCFT 164
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 4.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 110 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 217
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q8SH27 Cluster: Cytochrome oxidase subunit I; n=1;
Bolbophorus damnificus|Rep: Cytochrome oxidase subunit I
- Bolbophorus damnificus
Length = 125
Score = 32.7 bits (71), Expect = 9.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 377 IPVGTAIIIVAEVKYARVSISIPTVNI**AQTMNPNNPI 261
IPVG I IV E+ + S PT+NI T++PN I
Sbjct: 57 IPVGIPITIVVELNNTSLRNSNPTINIWWTHTIHPNTTI 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,494,268
Number of Sequences: 1657284
Number of extensions: 9564298
Number of successful extensions: 21730
Number of sequences better than 10.0: 113
Number of HSP's better than 10.0 without gapping: 20696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21634
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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