Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00843
(845 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 140 4e-32
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 139 7e-32
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 139 7e-32
UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep: ... 130 4e-29
UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus van... 128 1e-28
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 127 3e-28
UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa... 127 4e-28
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 127 4e-28
UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3; Eumet... 126 9e-28
UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:... 125 1e-27
UniRef50_UPI0000E25CDC Cluster: PREDICTED: hypothetical protein;... 121 2e-26
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 121 2e-26
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 121 2e-26
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 120 3e-26
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 117 4e-25
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 116 6e-25
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 116 1e-24
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 114 3e-24
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 114 3e-24
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 113 4e-24
UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 113 4e-24
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 112 9e-24
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 112 9e-24
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 112 9e-24
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 112 1e-23
UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;... 111 2e-23
UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14; Eume... 109 6e-23
UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Duges... 109 1e-22
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 108 1e-22
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 108 1e-22
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 107 3e-22
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 107 3e-22
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 107 3e-22
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 107 3e-22
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 105 1e-21
UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11; Pezizomycotin... 105 1e-21
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 105 2e-21
UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11; Plasmodium|... 105 2e-21
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 104 2e-21
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 104 2e-21
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 104 2e-21
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 104 3e-21
UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 104 3e-21
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 103 4e-21
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 102 1e-20
UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 102 1e-20
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 102 1e-20
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 101 2e-20
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 101 2e-20
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 101 2e-20
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 101 2e-20
UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 101 2e-20
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 100 4e-20
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 100 4e-20
UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putativ... 100 4e-20
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 100 5e-20
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 99 7e-20
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 99 7e-20
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 99 7e-20
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 99 7e-20
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 99 7e-20
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 100 9e-20
UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain, p... 100 9e-20
UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3; Pi... 100 9e-20
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 100 9e-20
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 99 1e-19
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 99 1e-19
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 99 1e-19
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 99 2e-19
UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lambl... 98 2e-19
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 98 2e-19
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 98 2e-19
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 98 3e-19
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 98 3e-19
UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101, w... 98 3e-19
UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3; Ent... 97 4e-19
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 97 5e-19
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 97 5e-19
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 97 5e-19
UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 97 5e-19
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 97 6e-19
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 97 6e-19
UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=... 97 6e-19
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 96 9e-19
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 96 9e-19
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 96 9e-19
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 96 9e-19
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 96 1e-18
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 96 1e-18
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 96 1e-18
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 96 1e-18
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 96 1e-18
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 96 1e-18
UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1; U... 96 1e-18
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 96 1e-18
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 95 1e-18
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 95 1e-18
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 95 1e-18
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 95 1e-18
UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box fa... 95 1e-18
UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase P... 95 1e-18
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 95 1e-18
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 95 1e-18
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 95 2e-18
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 95 2e-18
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 95 2e-18
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 95 2e-18
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 95 2e-18
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 95 2e-18
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 95 2e-18
UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5; Endopterygota|... 95 2e-18
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 95 2e-18
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 95 2e-18
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 95 2e-18
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 95 2e-18
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 95 2e-18
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 95 2e-18
UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2; P... 95 2e-18
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 95 2e-18
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 95 2e-18
UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX... 95 2e-18
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 95 3e-18
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 95 3e-18
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 95 3e-18
UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 95 3e-18
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 94 3e-18
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 94 3e-18
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 94 3e-18
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 3e-18
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 94 3e-18
UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:... 94 5e-18
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 94 5e-18
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 94 5e-18
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 94 5e-18
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 94 5e-18
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 94 5e-18
UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;... 94 5e-18
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 93 6e-18
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 93 6e-18
UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lambli... 93 6e-18
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 93 6e-18
UniRef50_Q09775 Cluster: ATP-dependent RNA helicase rok1; n=1; S... 93 6e-18
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 93 6e-18
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 93 8e-18
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 93 8e-18
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 93 8e-18
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 93 8e-18
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 93 8e-18
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 93 8e-18
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 93 8e-18
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 93 8e-18
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 93 1e-17
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 93 1e-17
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 93 1e-17
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 93 1e-17
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 93 1e-17
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 93 1e-17
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 92 1e-17
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 92 1e-17
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 92 1e-17
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 92 1e-17
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 92 1e-17
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 92 1e-17
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 92 1e-17
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 92 1e-17
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 92 1e-17
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 92 1e-17
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 92 2e-17
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 92 2e-17
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 92 2e-17
UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=... 92 2e-17
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 92 2e-17
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 92 2e-17
UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6; Plasmodiu... 92 2e-17
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 92 2e-17
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 92 2e-17
UniRef50_Q5KDK3 Cluster: ATP-dependent RNA helicase ROK1; n=2; F... 92 2e-17
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 91 2e-17
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 91 2e-17
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 91 2e-17
UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=... 91 2e-17
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 91 2e-17
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 91 2e-17
UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 91 2e-17
UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 91 2e-17
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 91 3e-17
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 91 3e-17
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 91 3e-17
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 91 3e-17
UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein; ... 91 3e-17
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 91 3e-17
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 91 3e-17
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 91 3e-17
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 91 4e-17
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 91 4e-17
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 91 4e-17
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 91 4e-17
UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subuni... 91 4e-17
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 91 4e-17
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 91 4e-17
UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1; ... 91 4e-17
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 90 6e-17
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 90 6e-17
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 90 6e-17
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 90 6e-17
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 90 6e-17
UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1; Ent... 90 7e-17
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 90 7e-17
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 90 7e-17
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 90 7e-17
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 90 7e-17
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 90 7e-17
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 90 7e-17
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 90 7e-17
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 90 7e-17
UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n... 90 7e-17
UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1; ... 90 7e-17
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 90 7e-17
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 89 1e-16
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 89 1e-16
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 89 1e-16
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 89 1e-16
UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2; F... 89 1e-16
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 89 1e-16
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 89 1e-16
UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1; Y... 89 1e-16
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 1e-16
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 89 1e-16
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 89 2e-16
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 89 2e-16
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 89 2e-16
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 89 2e-16
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 89 2e-16
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 89 2e-16
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 89 2e-16
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 89 2e-16
UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1; ... 89 2e-16
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 89 2e-16
UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11; ... 89 2e-16
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 89 2e-16
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 89 2e-16
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 89 2e-16
UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 89 2e-16
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 89 2e-16
UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51; Euteleo... 89 2e-16
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 88 2e-16
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 88 2e-16
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 88 2e-16
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 88 2e-16
UniRef50_A6PQ62 Cluster: DEAD/DEAH box helicase domain protein; ... 88 2e-16
UniRef50_Q7R0K7 Cluster: GLP_154_39979_41331; n=1; Giardia lambl... 88 2e-16
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 88 2e-16
UniRef50_Q5CWY8 Cluster: Rok1p, eIF4A-1-family RNA SFII helicase... 88 2e-16
UniRef50_Q240I5 Cluster: DEAD/DEAH box helicase family protein; ... 88 2e-16
UniRef50_Q39189 Cluster: DEAD-box ATP-dependent RNA helicase 7; ... 88 2e-16
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 88 3e-16
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 88 3e-16
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 88 3e-16
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 88 3e-16
UniRef50_A6FEC9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 88 3e-16
UniRef50_Q8IJ90 Cluster: Putative uncharacterized protein; n=1; ... 88 3e-16
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 88 3e-16
UniRef50_Q21736 Cluster: Putative uncharacterized protein; n=2; ... 88 3e-16
UniRef50_A2EQ41 Cluster: DEAD/DEAH box helicase family protein; ... 88 3e-16
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 88 3e-16
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 4e-16
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 87 4e-16
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 87 4e-16
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 87 4e-16
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 4e-16
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 87 4e-16
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 87 4e-16
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 87 4e-16
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 87 4e-16
UniRef50_UPI0000E48294 Cluster: PREDICTED: similar to DEAD (Asp-... 87 5e-16
UniRef50_UPI000065DC0B Cluster: Probable ATP-dependent RNA helic... 87 5e-16
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 87 5e-16
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 87 5e-16
UniRef50_Q6KI10 Cluster: DEAD-box ATP-dependent RNA helicase; n=... 87 5e-16
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 87 5e-16
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 87 5e-16
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 87 5e-16
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 87 5e-16
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 87 5e-16
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 87 5e-16
UniRef50_Q07886 Cluster: Probable ATP-dependent RNA helicase Dbp... 87 5e-16
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 87 7e-16
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 87 7e-16
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 87 7e-16
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 87 7e-16
UniRef50_Q4QIG1 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 87 7e-16
UniRef50_A0CM98 Cluster: Chromosome undetermined scaffold_21, wh... 87 7e-16
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 87 7e-16
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 86 9e-16
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 86 9e-16
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 86 9e-16
UniRef50_Q6T442 Cluster: Hel61; n=4; Leishmania|Rep: Hel61 - Lei... 86 9e-16
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 86 9e-16
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 86 9e-16
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 86 9e-16
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 86 9e-16
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 86 9e-16
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 86 9e-16
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 86 1e-15
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 86 1e-15
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 86 1e-15
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 86 1e-15
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 86 1e-15
UniRef50_A7SE71 Cluster: Predicted protein; n=1; Nematostella ve... 86 1e-15
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 86 1e-15
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 86 1e-15
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 85 2e-15
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 85 2e-15
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 85 2e-15
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 85 2e-15
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 85 2e-15
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 85 2e-15
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 85 2e-15
UniRef50_Q4QJI9 Cluster: Nucleolar RNA helicase II, putative; n=... 85 2e-15
UniRef50_Q4Q5M6 Cluster: ATP-dependent RNA helicase-like protein... 85 2e-15
UniRef50_Q2H6N4 Cluster: Putative uncharacterized protein; n=1; ... 85 2e-15
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 85 2e-15
UniRef50_Q8EJQ5 Cluster: ATP-dependent RNA helicase rhlB; n=62; ... 85 2e-15
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 85 2e-15
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 85 2e-15
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 85 2e-15
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 85 2e-15
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 85 2e-15
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 85 2e-15
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 85 2e-15
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 85 2e-15
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 85 2e-15
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 85 2e-15
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 85 2e-15
UniRef50_Q3LWE1 Cluster: Translation initiation factor 4A2; n=1;... 85 2e-15
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 85 2e-15
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 85 2e-15
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 85 2e-15
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 85 2e-15
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 85 2e-15
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 85 2e-15
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 85 3e-15
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 85 3e-15
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 85 3e-15
UniRef50_A6DML6 Cluster: ATP-dependent RNA helicase; n=1; Lentis... 85 3e-15
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 85 3e-15
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 85 3e-15
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 85 3e-15
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 85 3e-15
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 85 3e-15
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 85 3e-15
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 84 4e-15
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 84 4e-15
UniRef50_Q5CWJ1 Cluster: Nucleolar protein GU2. eIF4A-1-family. ... 84 4e-15
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 84 4e-15
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 84 4e-15
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 84 4e-15
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 84 4e-15
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 84 5e-15
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 84 5e-15
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 84 5e-15
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 84 5e-15
UniRef50_Q9VVK8 Cluster: CG5589-PA; n=12; Eumetazoa|Rep: CG5589-... 84 5e-15
UniRef50_Q93382 Cluster: Putative uncharacterized protein; n=2; ... 84 5e-15
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 84 5e-15
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 84 5e-15
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 84 5e-15
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 84 5e-15
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 84 5e-15
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 84 5e-15
UniRef50_UPI0000DB7B84 Cluster: PREDICTED: similar to Probable A... 83 6e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 83 6e-15
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 83 6e-15
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 83 6e-15
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 83 6e-15
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 83 6e-15
UniRef50_A4RXX8 Cluster: Predicted protein; n=1; Ostreococcus lu... 83 6e-15
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 83 6e-15
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 83 6e-15
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 83 6e-15
UniRef50_Q8D3Y6 Cluster: ATP-dependent RNA helicase, DEAD box fa... 83 9e-15
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 83 9e-15
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 83 9e-15
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 83 9e-15
UniRef50_Q7R388 Cluster: GLP_111_80478_82724; n=1; Giardia lambl... 83 9e-15
UniRef50_Q6CHU3 Cluster: Similarities with sp|P38112 Saccharomyc... 83 9e-15
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 83 1e-14
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 83 1e-14
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 83 1e-14
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 83 1e-14
UniRef50_Q4U8S0 Cluster: DEAD-box family helicase, putative; n=2... 83 1e-14
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 83 1e-14
UniRef50_A5KDY2 Cluster: RNA helicase, putative; n=1; Plasmodium... 83 1e-14
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 83 1e-14
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 83 1e-14
UniRef50_Q1DMX8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 83 1e-14
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 83 1e-14
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 83 1e-14
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 82 1e-14
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 82 1e-14
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 82 1e-14
UniRef50_A4R7K0 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_Q7XJN0 Cluster: DEAD-box ATP-dependent RNA helicase 17;... 82 1e-14
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 82 2e-14
UniRef50_Q7MT81 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 82 2e-14
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 82 2e-14
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 82 2e-14
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 82 2e-14
UniRef50_Q4N5F8 Cluster: ATP-dependent RNA helicase, putative; n... 82 2e-14
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 82 2e-14
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 82 2e-14
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 81 3e-14
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 81 3e-14
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 81 3e-14
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 81 3e-14
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 81 3e-14
UniRef50_Q7R3I2 Cluster: GLP_158_41121_38797; n=1; Giardia lambl... 81 3e-14
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 81 3e-14
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 81 3e-14
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 81 3e-14
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 81 3e-14
UniRef50_O76743 Cluster: ATP-dependent RNA helicase glh-4; n=2; ... 81 3e-14
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 81 3e-14
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 81 3e-14
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 81 3e-14
UniRef50_Q86IZ9 Cluster: Similar to Rattus norvegicus (Rat). ROK... 81 3e-14
UniRef50_Q5CKB1 Cluster: ATP-dependent RNA helicase; n=2; Crypto... 81 3e-14
UniRef50_Q581A3 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 81 3e-14
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 81 3e-14
UniRef50_A0C321 Cluster: Chromosome undetermined scaffold_146, w... 81 3e-14
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 81 3e-14
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 81 3e-14
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 81 5e-14
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 81 5e-14
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 81 5e-14
UniRef50_Q9N341 Cluster: Putative uncharacterized protein; n=2; ... 81 5e-14
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 81 5e-14
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 81 5e-14
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 81 5e-14
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 81 5e-14
UniRef50_UPI00006CC3DB Cluster: DEAD/DEAH box helicase family pr... 80 6e-14
UniRef50_Q81RE0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 6e-14
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 80 6e-14
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 80 6e-14
UniRef50_Q5C5E1 Cluster: SJCHGC03242 protein; n=1; Schistosoma j... 80 6e-14
UniRef50_Q9HXE5 Cluster: ATP-dependent RNA helicase rhlB; n=22; ... 80 6e-14
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 80 6e-14
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 80 8e-14
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 80 8e-14
UniRef50_A2SJY2 Cluster: Putative ATP-dependent RNA helicase; n=... 80 8e-14
UniRef50_Q4Q1N9 Cluster: DEAD box RNA helicase, putative; n=5; T... 80 8e-14
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 80 8e-14
UniRef50_Q88NB7 Cluster: ATP-dependent RNA helicase rhlB; n=18; ... 80 8e-14
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 80 8e-14
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 80 8e-14
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 79 1e-13
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 79 1e-13
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 79 1e-13
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 79 1e-13
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 79 1e-13
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_A0LLL9 Cluster: DEAD/DEAH box helicase domain protein; ... 79 1e-13
UniRef50_Q5CWJ4 Cluster: Drs1p, eIF4a-1-family RNA SFII helicase... 79 1e-13
UniRef50_Q16YP8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 79 1e-13
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 79 1e-13
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 79 1e-13
UniRef50_Q6CZD9 Cluster: ATP-dependent RNA helicase rhlB; n=2; G... 79 1e-13
UniRef50_O60173 Cluster: ATP-dependent RNA helicase dbp7; n=1; S... 79 1e-13
UniRef50_Q9KNA4 Cluster: ATP-dependent RNA helicase, DEAD box fa... 79 2e-13
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 79 2e-13
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 79 2e-13
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 79 2e-13
UniRef50_P91340 Cluster: Putative uncharacterized protein; n=3; ... 79 2e-13
UniRef50_P90897 Cluster: Putative uncharacterized protein; n=2; ... 79 2e-13
UniRef50_Q8SRV1 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Enceph... 79 2e-13
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 79 2e-13
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 78 2e-13
UniRef50_UPI0000498E70 Cluster: DEAD/DEAH box helicase; n=1; Ent... 78 2e-13
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 78 2e-13
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 78 2e-13
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 78 2e-13
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 78 2e-13
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 78 2e-13
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 78 2e-13
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 78 3e-13
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 78 3e-13
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 78 3e-13
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 78 3e-13
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 78 3e-13
UniRef50_Q5CL10 Cluster: DEAD/H (Asp-Glu-Ala-Asp/His) box polype... 78 3e-13
UniRef50_Q55CN3 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 78 3e-13
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 140 bits (339), Expect = 4e-32
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
++E T+SIHGDR+QREREEAL +FK+GK ILVATAVAARGLDIKNV V+NYDLPK
Sbjct: 579 LSEDNFPTTSIHGDRLQREREEALYDFKTGKMAILVATAVAARGLDIKNVRHVINYDLPK 638
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFYD 762
IDEY+HRIGRTGRVGN+GKA SF+D
Sbjct: 639 EIDEYIHRIGRTGRVGNKGKATSFFD 664
Score = 114 bits (275), Expect = 2e-24
Identities = 59/94 (62%), Positives = 69/94 (73%), Gaps = 4/94 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTLMFSATFP++IQ LA +FLNNY+FV VGIVG A TD+EQ F EV K +KR LK+L
Sbjct: 490 ERQTLMFSATFPQEIQQLAAKFLNNYVFVTVGIVGSACTDIEQSFFEVKKSDKRTKLKEL 549
Query: 431 ----IEENDGKRILVFVETKRNADFIAAMLRNSN 520
IE+N ILVFV K+ ADFIAA+L N
Sbjct: 550 LNEEIEQNMLNGILVFVSEKKTADFIAALLSEDN 583
Score = 99.5 bits (237), Expect = 9e-20
Identities = 45/78 (57%), Positives = 58/78 (74%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
SVLK + YGGT+ HQ I +G ILVATPGRL D V + +++F ++ FVVLDEADRM
Sbjct: 408 SVLKCHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDEADRM 467
Query: 186 LDMGFMPSIEKMMLHPTM 239
LDMGF+P +EK++ H TM
Sbjct: 468 LDMGFLPDVEKVLRHDTM 485
>UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep:
Vasa-like protein - Anopheles gambiae (African malaria
mosquito)
Length = 596
Score = 139 bits (337), Expect = 7e-32
Identities = 65/89 (73%), Positives = 79/89 (88%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+S ++E Q T+SIHGDR+QRERE AL +FKSG+ +L+AT+VAARGLDIKNV+ VVNYD
Sbjct: 440 ASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYD 499
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
LPKSID+YVHRIGRTGRVGN+G+A SFYD
Sbjct: 500 LPKSIDDYVHRIGRTGRVGNKGRATSFYD 528
Score = 117 bits (281), Expect = 4e-25
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ LKV V+YGGTAV+HQ + GCH+LVATPGRL DF++R V+F +V FVVLDEADR
Sbjct: 275 GTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADR 334
Query: 183 MLDMGFMPSIEKMMLHPTMVE 245
MLDMGF+PSIEK+M H TM E
Sbjct: 335 MLDMGFLPSIEKVMGHATMPE 355
Score = 107 bits (256), Expect = 5e-22
Identities = 50/86 (58%), Positives = 67/86 (77%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTLMFSATFP +IQ LAG+FL+NY+ V VGIVGGA DVEQ V K++KR L+++
Sbjct: 358 QRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACADVEQTIHLVEKFKKRKKLEEI 417
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
+ + K LVFVETKRNAD++A+++
Sbjct: 418 LNGGNPKGTLVFVETKRNADYLASLM 443
>UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa
protein - Apis mellifera (Honeybee)
Length = 630
Score = 139 bits (337), Expect = 7e-32
Identities = 65/86 (75%), Positives = 75/86 (87%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
++E T+SIHGDR+QR+REEAL +FKSG+ ILVATAVAARGLDIKNV V+NYDLPK
Sbjct: 471 LSENNYPTTSIHGDRLQRQREEALADFKSGRMSILVATAVAARGLDIKNVSHVINYDLPK 530
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFYD 762
IDEYVHRIGRTGRVGNRG+A SF+D
Sbjct: 531 GIDEYVHRIGRTGRVGNRGRATSFFD 556
Score = 123 bits (297), Expect = 5e-27
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S+LK VAYGGT+V HQ ++ GCHILVATPGRL DFVE+ RV F SV+F+VLDEADRM
Sbjct: 300 SILKTVVAYGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRM 359
Query: 186 LDMGFMPSIEKMMLHPTMV 242
LDMGF+PSIEKM+ H TMV
Sbjct: 360 LDMGFLPSIEKMVDHETMV 378
Score = 117 bits (281), Expect = 4e-25
Identities = 59/94 (62%), Positives = 74/94 (78%), Gaps = 4/94 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTLMFSATFP+++QHLA RFLNNYLF+AVGIVGGA +DVEQ F EV + +K++ LK++
Sbjct: 382 ERQTLMFSATFPDEVQHLARRFLNNYLFLAVGIVGGACSDVEQNFYEVARNKKKDLLKEI 441
Query: 431 IE-ENDGKRI---LVFVETKRNADFIAAMLRNSN 520
+E END + LVFVE K+ ADFIA L +N
Sbjct: 442 LERENDSGTLGGTLVFVEMKKKADFIAVFLSENN 475
>UniRef50_A1XCP2 Cluster: Vasa-like protein; n=2; Coelomata|Rep:
Vasa-like protein - Macrobrachium rosenbergii (Giant
fresh water prawn)
Length = 710
Score = 130 bits (314), Expect = 4e-29
Identities = 62/89 (69%), Positives = 76/89 (85%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++ + +++L T+SIHGDR QRERE+AL +FK+GK ILVAT+VAARGLDI V VVN+D
Sbjct: 547 ATFLCQEELPTTSIHGDREQREREQALADFKAGKCPILVATSVAARGLDIPEVQHVVNFD 606
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
LPK+IDEYVHRIGRTGR GN G+AVSFYD
Sbjct: 607 LPKNIDEYVHRIGRTGRCGNIGRAVSFYD 635
Score = 107 bits (258), Expect = 3e-22
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
RQTL+FSAT+P+DIQ LA FL +YLF+AVGIVGGA +DVEQ F++VTKY KR L
Sbjct: 465 RQTLLFSATYPQDIQKLAADFLKTDYLFLAVGIVGGACSDVEQTFVQVTKYSKREQLLDF 524
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
++ +R +VFVETKR ADFIA L
Sbjct: 525 LKTIGNERTMVFVETKRQADFIATFL 550
Score = 77.8 bits (183), Expect = 3e-13
Identities = 34/79 (43%), Positives = 51/79 (64%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ ++ V YGG Q I++GC+I+ TPGRL D ++R + +R++VLDEADR
Sbjct: 381 GTCVRPVVVYGGVNTGFQLREISKGCNIVCGTPGRLLDVIQRGWIGLTKLRYLVLDEADR 440
Query: 183 MLDMGFMPSIEKMMLHPTM 239
MLDMGF P + +++ P M
Sbjct: 441 MLDMGFEPDMRRLVASPGM 459
>UniRef50_Q4JG17 Cluster: Vasa-like protein; n=1; Litopenaeus
vannamei|Rep: Vasa-like protein - Penaeus vannamei
(Penoeid shrimp) (European white shrimp)
Length = 703
Score = 128 bits (310), Expect = 1e-28
Identities = 56/88 (63%), Positives = 73/88 (82%)
Frame = +1
Query: 499 SHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDL 678
+++ E++ +++HGDR Q +RE+AL F++G H ILVATAV ARGLDIK + +VVNYDL
Sbjct: 534 TYLCEKKFRATTMHGDRYQAQREQALSEFRTGVHNILVATAVTARGLDIKGIGVVVNYDL 593
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
PK IDEYVHRIGRTGR+GNRG ++SFYD
Sbjct: 594 PKDIDEYVHRIGRTGRLGNRGLSISFYD 621
Score = 102 bits (244), Expect = 1e-20
Identities = 48/83 (57%), Positives = 61/83 (73%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
SV K VAYGG A HQ I GCHILVATPGRL DF+E+ ++ F S++++VLDEADRM
Sbjct: 365 SVAKCCVAYGGAAGFHQLKTIHSGCHILVATPGRLLDFLEKGKIVFSSLKYLVLDEADRM 424
Query: 186 LDMGFMPSIEKMMLHPTMVETTK 254
LDMGF+ SI+ ++ H TM T +
Sbjct: 425 LDMGFLSSIKTVINHKTMTPTAE 447
Score = 97.9 bits (233), Expect = 3e-19
Identities = 52/90 (57%), Positives = 63/90 (70%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ER TLMFSATFP +IQ LA FLNNYLFV VG VG A+TDV+Q + V K+EK+ L ++
Sbjct: 447 ERITLMFSATFPHEIQELASAFLNNYLFVVVGTVGAANTDVKQEVLCVPKFEKKAKLVEM 506
Query: 431 IEE----NDGKRILVFVETKRNADFIAAML 508
EE D ++ILVFVE KR ADF+ L
Sbjct: 507 CEEILISADDEKILVFVEQKRVADFVGTYL 536
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 127 bits (307), Expect = 3e-28
Identities = 57/90 (63%), Positives = 77/90 (85%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++ + ++++ T+SIHGDR QRERE+AL +F+ GK +LVAT+VAARGLDI+NV V+N+D
Sbjct: 557 ATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFD 616
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYDL 765
LP +IDEYVHRIGRTGR GN G+A+SF+DL
Sbjct: 617 LPSTIDEYVHRIGRTGRCGNTGRAISFFDL 646
Score = 101 bits (242), Expect = 2e-20
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
+RQTLMFSATFPE+IQ LA FL +NYLFVAVG VGGA DV+Q ++V ++ KR L +
Sbjct: 474 QRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVE 533
Query: 428 LIEENDGKRILVFVETKRNADFIAAML 508
++ +R +VFVETK+ ADFIA L
Sbjct: 534 ILRNIGDERTMVFVETKKKADFIATFL 560
Score = 84.2 bits (199), Expect = 4e-15
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ ++ V YGGT + H I +GC+IL ATPGRL D + + ++ ++++VLDEADR
Sbjct: 391 GTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADR 450
Query: 183 MLDMGFMPSIEKMMLHPTM 239
MLDMGF P ++K++ P M
Sbjct: 451 MLDMGFGPEMKKLISCPGM 469
>UniRef50_Q4JF01 Cluster: Vasa homlogue; n=2; Eukaryota|Rep: Vasa
homlogue - Platynereis dumerilii (Dumeril's clam worm)
Length = 712
Score = 127 bits (306), Expect = 4e-28
Identities = 58/89 (65%), Positives = 74/89 (83%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+++++++Q +SIHGDR+QREREEAL +FK+G+ IL+AT+VAARGLDI V V+NYD
Sbjct: 540 AAYLSQEQYPATSIHGDRLQREREEALLDFKTGRAPILIATSVAARGLDIPGVKHVINYD 599
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
LP IDEYVHRIGRTGR GN GKA SF+D
Sbjct: 600 LPSGIDEYVHRIGRTGRCGNLGKATSFFD 628
Score = 101 bits (241), Expect = 3e-20
Identities = 49/86 (56%), Positives = 64/86 (74%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTLMFSATF +IQ LA FL+ Y+FV VG VGGA++D+ Q +VTKYEKR L ++
Sbjct: 458 QRQTLMFSATFAAEIQQLAKEFLSEYVFVTVGRVGGANSDITQEVHQVTKYEKREKLVEI 517
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
+ + R LVF+ETKR+ADF+AA L
Sbjct: 518 LNQAGTDRTLVFLETKRSADFLAAYL 543
Score = 84.2 bits (199), Expect = 4e-15
Identities = 33/71 (46%), Positives = 52/71 (73%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ V YGGT+V +Q + +G H++V TPGRL DF+ + +++ V++++LDEADRMLD
Sbjct: 378 VRPVVVYGGTSVGYQARELEKGAHVVVGTPGRLLDFIGKGKINLSKVKYLILDEADRMLD 437
Query: 192 MGFMPSIEKMM 224
MGF P I K++
Sbjct: 438 MGFEPEIRKLV 448
>UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5;
Eukaryota|Rep: ATP-dependent RNA helicase vasa -
Drosophila melanogaster (Fruit fly)
Length = 661
Score = 127 bits (306), Expect = 4e-28
Identities = 54/89 (60%), Positives = 76/89 (85%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+S ++E++ T+SIHGDR+Q +RE+AL++FK+G +L+AT+VA+RGLDIKN+ V+NYD
Sbjct: 506 ASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYD 565
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+P ID+YVHRIGRTGRVGN G+A SF+D
Sbjct: 566 MPSKIDDYVHRIGRTGRVGNNGRATSFFD 594
Score = 109 bits (262), Expect = 9e-23
Identities = 54/87 (62%), Positives = 68/87 (78%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
E QTLMFSATFPE+IQ +AG FL NY+FVA+GIVGGA +DV+Q EV KY KR+ L ++
Sbjct: 425 EHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYAKRSKLIEI 484
Query: 431 I-EENDGKRILVFVETKRNADFIAAML 508
+ E+ DG +VFVETKR ADF+A+ L
Sbjct: 485 LSEQADG--TIVFVETKRGADFLASFL 509
Score = 107 bits (257), Expect = 3e-22
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S LK+ + YGGT+ RHQ + I RGCH+++ATPGRL DFV+R ++F RFVVLDEADRM
Sbjct: 345 SYLKIGIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRM 404
Query: 186 LDMGFMPSIEKMMLHPTM 239
LDMGF + ++M H TM
Sbjct: 405 LDMGFSEDMRRIMTHVTM 422
>UniRef50_Q9GV13 Cluster: Vasa-related protein CnVAS1; n=3;
Eumetazoa|Rep: Vasa-related protein CnVAS1 - Hydra
magnipapillata (Hydra)
Length = 797
Score = 126 bits (303), Expect = 9e-28
Identities = 57/103 (55%), Positives = 78/103 (75%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
+NL + K +S++ + T+SIHGDR+Q++REEAL FK+G +L+ATAVAA
Sbjct: 607 RNLVFVQTKRLADFLASYLCQNGFHTTSIHGDRLQQQREEALAEFKAGTQHVLIATAVAA 666
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
RGLDI +V V+NYDLP I+EY+HRIGRTGR+GN+GKA+SF+
Sbjct: 667 RGLDIADVKQVINYDLPDEIEEYIHRIGRTGRIGNKGKAISFF 709
Score = 93.9 bits (223), Expect = 5e-18
Identities = 43/86 (50%), Positives = 62/86 (72%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+R TLMFSATFP +IQ+LA FLNNY+++ +G VGG +D+ Q +EV + KR+ L ++
Sbjct: 540 DRHTLMFSATFPTEIQNLAAEFLNNYVYLTIGKVGGTHSDITQCIMEVEESAKRDKLIEI 599
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
++ R LVFV+TKR ADF+A+ L
Sbjct: 600 LDTEGTNRNLVFVQTKRLADFLASYL 625
Score = 80.6 bits (190), Expect = 5e-14
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K V YGG V + + + CH+LV TPGRL DF+ + ++S ++++++LDEADRMLD
Sbjct: 460 IKPVVIYGGVQVAYHLRQVQQDCHLLVGTPGRLKDFLGKRKISLANLKYLILDEADRMLD 519
Query: 192 MGFMPSIEKMM 224
MGF+P I+ ++
Sbjct: 520 MGFLPEIKAII 530
>UniRef50_Q4W7T7 Cluster: VASA RNA helicase; n=3; Daphniidae|Rep:
VASA RNA helicase - Moina macrocopa
Length = 843
Score = 125 bits (302), Expect = 1e-27
Identities = 57/89 (64%), Positives = 72/89 (80%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++ +A Q +SIHGDR+Q +RE+AL+ FKSG+ ILVAT VAARGLDI V+ V+NYD
Sbjct: 677 AAFLANTQFQATSIHGDRLQSQREQALREFKSGQRNILVATNVAARGLDIAGVEYVINYD 736
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
LP I+EYVHRIGRTGRVGN G+++SFYD
Sbjct: 737 LPADIEEYVHRIGRTGRVGNAGRSISFYD 765
Score = 101 bits (241), Expect = 3e-20
Identities = 45/88 (51%), Positives = 66/88 (75%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
R TLMFSATFP+D+Q +AG++L++Y+FV G +GG + DV Q F EV + +KRN L +++
Sbjct: 596 RVTLMFSATFPDDVQKIAGKYLHDYVFVTTGNIGGMNPDVCQEFHEVQRQDKRNKLVEIL 655
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNS 517
+ R++VFVE+K+ ADFIAA L N+
Sbjct: 656 RDLGNSRVIVFVESKKTADFIAAFLANT 683
Score = 99 bits (238), Expect = 7e-20
Identities = 45/78 (57%), Positives = 56/78 (71%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
SVLK + YGGT V HQ ++ GC+ILV TPGRL DFV++ + F +V+F +LDEADRM
Sbjct: 513 SVLKSVIVYGGTQVSHQKSSLMNGCNILVGTPGRLKDFVDKGFIDFSNVQFFILDEADRM 572
Query: 186 LDMGFMPSIEKMMLHPTM 239
LDMGF IE + HPTM
Sbjct: 573 LDMGFGSDIEFIAQHPTM 590
>UniRef50_UPI0000E25CDC Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 494
Score = 121 bits (292), Expect = 2e-26
Identities = 57/85 (67%), Positives = 69/85 (81%)
Frame = +1
Query: 508 AEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKS 687
++++ +SIHGDR QR+REEAL F+SGK ILVATAVAARGLDI NV V+N+DLP
Sbjct: 260 SQKRYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSD 319
Query: 688 IDEYVHRIGRTGRVGNRGKAVSFYD 762
I+EYVHRIGRTGRVGN G A SF++
Sbjct: 320 IEEYVHRIGRTGRVGNLGLATSFFN 344
>UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa
homolog - Ciona savignyi (Pacific transparent sea
squirt)
Length = 770
Score = 121 bits (292), Expect = 2e-26
Identities = 55/79 (69%), Positives = 68/79 (86%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T+SIHGDR+Q+ERE+AL++FKS IL+AT+VAARGLDI V+ V+NYD+PK IDEYVH
Sbjct: 594 TTSIHGDRLQQEREQALRDFKSAVCPILIATSVAARGLDIPKVEHVINYDMPKEIDEYVH 653
Query: 706 RIGRTGRVGNRGKAVSFYD 762
RIGRTGR GN G+A +FYD
Sbjct: 654 RIGRTGRCGNLGRATTFYD 672
Score = 99.1 bits (236), Expect = 1e-19
Identities = 45/79 (56%), Positives = 56/79 (70%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+V++ VAYGGT++ HQ ++ RGCHIL+ATPGRL DF+ R V V FV+LDEADR
Sbjct: 416 GTVVRPVVAYGGTSMNHQIRDLQRGCHILIATPGRLMDFINRGLVGLDHVEFVILDEADR 475
Query: 183 MLDMGFMPSIEKMMLHPTM 239
MLDMGF I K+ P M
Sbjct: 476 MLDMGFETEIRKLASSPGM 494
Score = 93.9 bits (223), Expect = 5e-18
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
+R TLMFSATFP++IQ LA FL ++LF+ VG VGGA TDV Q I+V + +KR L +
Sbjct: 499 DRHTLMFSATFPDEIQRLAHDFLREDFLFLTVGRVGGACTDVTQSIIQVDQDDKRAKLLE 558
Query: 428 LIEE--NDGKRILVFVETKRNADFIAAMLRNSNC 523
LI + R LVFVETKR ADF+A ML C
Sbjct: 559 LISDVAETRSRTLVFVETKRGADFLACMLSQEGC 592
>UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia
franciscana|Rep: VASA RNA helicase - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 726
Score = 121 bits (292), Expect = 2e-26
Identities = 56/86 (65%), Positives = 70/86 (81%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
++ + L +SIHGDR Q +REE L++FKSG ILVATAVAARGLDIK V +V+NY+LP
Sbjct: 575 LSTKNLPATSIHGDRFQYQREEVLRDFKSGHRNILVATAVAARGLDIKGVGLVINYELPT 634
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFYD 762
IDEYVHRIGRTGR+GN G A+SF++
Sbjct: 635 DIDEYVHRIGRTGRLGNTGHAISFFN 660
Score = 96.7 bits (230), Expect = 6e-19
Identities = 42/78 (53%), Positives = 57/78 (73%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
+++K V YGG A R+Q D + GC+ILV TPGRL DF+ R +F + +F+VLDEADRM
Sbjct: 408 TIIKPVVVYGGVAPRYQSDKVKSGCNILVGTPGRLIDFMNRGVFNFSACKFLVLDEADRM 467
Query: 186 LDMGFMPSIEKMMLHPTM 239
LDMGFM ++K++ H TM
Sbjct: 468 LDMGFMGEVKKVVYHGTM 485
Score = 96.3 bits (229), Expect = 9e-19
Identities = 45/90 (50%), Positives = 60/90 (66%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ER TLMFSATFP ++Q LA FL NY+FV VG VGGA DV Q IE+ + + L ++
Sbjct: 490 ERNTLMFSATFPNEVQELAAEFLENYIFVTVGTVGGACMDVLQEVIEIDAKSRIDRLLEI 549
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSN 520
+ E +G + LVF +K+ ADF+AA+L N
Sbjct: 550 LTEKEGVKTLVFASSKKTADFLAALLSTKN 579
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 120 bits (290), Expect = 3e-26
Identities = 57/78 (73%), Positives = 65/78 (83%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGDR QR+REEAL F+SGK ILVATAVAARGLDI NV V+N+DLP I+EYVHR
Sbjct: 469 TSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHR 528
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGRVGN G A SF++
Sbjct: 529 IGRTGRVGNLGLATSFFN 546
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ V YGG + Q ++ RGCH+LVATPGRL D +ER ++ +++VLDEADRM
Sbjct: 293 SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRM 352
Query: 186 LDMGFMPSIEKMMLHPTM 239
LDMGF P I +++ TM
Sbjct: 353 LDMGFEPQIRRIVEQDTM 370
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
R T+MFSATFP++IQ LA FL+ Y+F+AVG VG S ++ Q + V + +KR+ L L+
Sbjct: 376 RHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLL 435
Query: 434 EENDGKRI-LVFVETKRNADFIAAML 508
+ LVFVETK+ AD + L
Sbjct: 436 NATGKDSLTLVFVETKKGADSLEDFL 461
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 117 bits (281), Expect = 4e-25
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGDR Q +RE ALQ+F+ G ILVAT VAARGLDI NV V+NYDLP I+EYVHR
Sbjct: 494 ASIHGDRSQSDRELALQSFREGSTPILVATRVAARGLDIPNVKFVINYDLPTDIEEYVHR 553
Query: 709 IGRTGRVGNRGKAVSFY 759
IGRTGRVGN G+A+SFY
Sbjct: 554 IGRTGRVGNLGEAISFY 570
Score = 87.4 bits (207), Expect = 4e-16
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S+++ V YGG +R Q +I++GC++LVATPGRL D +ER ++ +R++VLDEADRM
Sbjct: 318 SLVRPCVVYGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRM 377
Query: 186 LDMGFMPSIEKMMLHPTM 239
LDMGF P I K++ M
Sbjct: 378 LDMGFEPQIRKIVEQTNM 395
Score = 83.0 bits (196), Expect = 9e-15
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTLMFSATFP +IQ LA FL +YLF+ VG VG S ++ Q + V + EKR+ L +
Sbjct: 400 QRQTLMFSATFPREIQMLASDFLKDYLFLRVGKVGSTSQNITQRIVYVDENEKRDHLLDI 459
Query: 431 IEENDG-KRILVFVETKRNADFIAAML 508
+ + D ILVFVETKR AD + L
Sbjct: 460 LTDIDSDSLILVFVETKRGADALEGFL 486
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 116 bits (280), Expect = 6e-25
Identities = 56/77 (72%), Positives = 63/77 (81%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
SSIHGDR Q ERE AL F++G+ ILVATAVAARGLDI NV V+NYDLP I+EYVHR
Sbjct: 464 SSIHGDRSQVEREAALSMFRNGQCPILVATAVAARGLDIPNVKHVINYDLPSDIEEYVHR 523
Query: 709 IGRTGRVGNRGKAVSFY 759
IGRTGR+GN G+A SFY
Sbjct: 524 IGRTGRLGNHGRATSFY 540
Score = 87.8 bits (208), Expect = 3e-16
Identities = 39/76 (51%), Positives = 51/76 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ V YGG Q + GCH+LVATPGRL DF+E+N++S +++VLDEADRMLD
Sbjct: 290 LRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLD 349
Query: 192 MGFMPSIEKMMLHPTM 239
MGF P I K++ M
Sbjct: 350 MGFEPQIRKIIEESNM 365
Score = 84.2 bits (199), Expect = 4e-15
Identities = 46/94 (48%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +2
Query: 230 SNHGGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEK 409
SN RQTLMFSATFP++IQ LA FL NY+F+ VG VG S ++Q I +T EK
Sbjct: 363 SNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFMTVGRVGSTSDSIKQEIIYMTDVEK 422
Query: 410 RNSLKQLIEEN-DGKRILVFVETKRNADFIAAML 508
N LK + IL+FVETK+ AD +A L
Sbjct: 423 LNYLKNIFNTTAPNTLILIFVETKKGADSLARFL 456
>UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: PUTATIVE ATP-DEPENDENT RNA
HELICASE - Encephalitozoon cuniculi
Length = 503
Score = 116 bits (278), Expect = 1e-24
Identities = 52/104 (50%), Positives = 75/104 (72%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L K+ C + + +L S+HGD+ Q +R+EAL+ F++G+ ++VAT+VAA
Sbjct: 341 KVLVFVERKSECGEVEKVLKKSGILCVSLHGDKEQADRDEALKGFRNGRFPVMVATSVAA 400
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
RG+DIK+V +V+NYD+PK I EY+HRIGRTGR G GK++SFYD
Sbjct: 401 RGIDIKDVKLVINYDIPKDIKEYIHRIGRTGREGKSGKSISFYD 444
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
GS ++V YG + Q G I+VATPGRL D + R +V +R VLDEAD+
Sbjct: 190 GSRIRVVSIYG----KKQDLPSYSGVDIVVATPGRLIDLLHRKKVDLSEIRMFVLDEADK 245
Query: 183 MLDMGF 200
+LDMGF
Sbjct: 246 LLDMGF 251
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 114 bits (274), Expect = 3e-24
Identities = 53/82 (64%), Positives = 66/82 (80%)
Frame = +1
Query: 517 QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDE 696
+L SIHGDR+QREREEAL+ FKSG +LVAT VA+RGLDI NV +V+ YD+P +ID+
Sbjct: 436 ELACVSIHGDRVQREREEALRLFKSGACQVLVATDVASRGLDIPNVGVVIQYDMPSNIDD 495
Query: 697 YVHRIGRTGRVGNRGKAVSFYD 762
YVHRIGRTGR G G A+SF++
Sbjct: 496 YVHRIGRTGRAGKVGVAISFFN 517
Score = 87.0 bits (206), Expect = 5e-16
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ V YGG RHQ ++RGC +LVATPGRL D R V F +RF++LDEADRMLD
Sbjct: 265 VRCVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLD 324
Query: 192 MGFMPSIEKMMLHP 233
MGF P I ++ P
Sbjct: 325 MGFEPQIRMIVQGP 338
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL++SATFP +IQ LA F+ + F+ VG VG + ++ Q + +KR +L L
Sbjct: 347 QRQTLLYSATFPVEIQRLAREFMCRHSFLQVGRVGSTTENITQDVRWIEDPDKRQALLTL 406
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNS 517
+ EN+GK +LVFVE KR+AD++ LRNS
Sbjct: 407 LRENEGKLVLVFVEKKRDADYLERFLRNS 435
>UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4;
Caenorhabditis|Rep: ATP-dependent RNA helicase glh-2 -
Caenorhabditis elegans
Length = 974
Score = 114 bits (274), Expect = 3e-24
Identities = 52/87 (59%), Positives = 68/87 (78%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+S ++ Q+ +IHG R QRER EAL+ F++G +L+ATAVA RGLDIK VD V+NYD
Sbjct: 834 ASILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYD 893
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+P +ID+Y+HRIGRTGRVGN G+A SF
Sbjct: 894 MPDNIDDYIHRIGRTGRVGNAGRATSF 920
Score = 60.9 bits (141), Expect = 4e-08
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
+++++ YGG AV + I +G I+V T GR+ F E + RF VLDEADRM
Sbjct: 656 TMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRM 715
Query: 186 LD-MGFMPSIEKMMLHPTM 239
+D MGF I+ ++ + +M
Sbjct: 716 IDAMGFGTDIDTIVNYESM 734
Score = 51.2 bits (117), Expect = 3e-05
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 13/101 (12%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
RQTLMFSATFP+ +Q A L Y+ +A+ +G A+ V Q F + + EK++ L ++
Sbjct: 740 RQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIGAANKCVLQEFEKCDRSEKKDKLLEI 799
Query: 431 I---------EEND---GKRILVFVETKRNADFIAAMLRNS 517
+ E+N K+ +VFV + AD +A++L ++
Sbjct: 800 LGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSA 840
>UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1;
Chironomus tentans|Rep: Ded1-like DEAD-box RNA helicase
- Chironomus tentans (Midge)
Length = 776
Score = 113 bits (273), Expect = 4e-24
Identities = 54/78 (69%), Positives = 65/78 (83%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGDR QRERE+AL+ F+SG ILVATAVAARGLDI +V V+NYDLP ++EYVHR
Sbjct: 560 TSIHGDRSQREREDALKCFRSGDCPILVATAVAARGLDIPHVKHVINYDLPSDVEEYVHR 619
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGR+GN G A SF++
Sbjct: 620 IGRTGRMGNLGIATSFFN 637
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/81 (48%), Positives = 53/81 (65%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ AV YGG Q + RGCH++VATPGRL D + R ++ ++RF+VLDEADRM
Sbjct: 377 SRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLDDIINRGKIGLENLRFLVLDEADRM 436
Query: 186 LDMGFMPSIEKMMLHPTMVET 248
LDMGF P I ++ + M T
Sbjct: 437 LDMGFEPQIRHIIENRDMPPT 457
Score = 76.6 bits (180), Expect = 7e-13
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 8/94 (8%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTLMFSATFP++IQ LA FL+NY+F+AVG VG S ++ Q + V + EKR+ L L
Sbjct: 459 QRQTLMFSATFPKNIQELASDFLSNYIFLAVGRVGSTSENITQTILWVNENEKRSYLLDL 518
Query: 431 I--------EENDGKRILVFVETKRNADFIAAML 508
+ + + L+FVETK+ AD + L
Sbjct: 519 LSRLREGSPDYSPDSLTLIFVETKKGADALEEFL 552
>UniRef50_Q17CR5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 625
Score = 113 bits (273), Expect = 4e-24
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGDR Q+ERE+AL+ F+SG+ +LVATAVAARGLDI NV V+N+DLP I+EYVHR
Sbjct: 455 TSIHGDRTQKEREDALKCFRSGRCPVLVATAVAARGLDIPNVKHVINFDLPAEIEEYVHR 514
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGR+GN G A SF++
Sbjct: 515 IGRTGRMGNLGIATSFFN 532
Score = 49.6 bits (113), Expect = 1e-04
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Frame = +2
Query: 314 FLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE----ENDGKR----ILVFV 469
FL+NY+F+AVG VG S ++ Q V + +KR+ L L+ +N+G L+FV
Sbjct: 375 FLHNYIFLAVGRVGSTSVNITQSIFWVDENDKRSHLLDLLSNIKAQNEGDEKDCLTLIFV 434
Query: 470 ETKRNADFIAAMLRNSN 520
ETK++AD + L + N
Sbjct: 435 ETKKSADSLEEFLYHYN 451
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 112 bits (270), Expect = 9e-24
Identities = 53/78 (67%), Positives = 64/78 (82%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGDR Q EREEAL+ F+ G+ ILVATAVAARGLDI NV V+N+DLP ++EYVHR
Sbjct: 593 TSIHGDRTQAEREEALRLFRCGRCPILVATAVAARGLDIPNVKQVINFDLPAEVEEYVHR 652
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGR+GN G A SF++
Sbjct: 653 IGRTGRMGNLGTATSFFN 670
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/81 (49%), Positives = 55/81 (67%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ AV YGG + Q ++ RGCH++VATPGRL D + R +V ++RF+VLDEADRM
Sbjct: 410 SRMRPAVLYGGNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLDEADRM 469
Query: 186 LDMGFMPSIEKMMLHPTMVET 248
LDMGF P I +++ M T
Sbjct: 470 LDMGFEPQIRRIVEESRMPVT 490
Score = 77.4 bits (182), Expect = 4e-13
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTLMFSATFP+ IQ LA FL Y+F+AVG VG S ++ Q V + KR+ L L
Sbjct: 492 ERQTLMFSATFPKAIQELASDFLYRYIFLAVGRVGSTSVNITQTIFWVEENIKRSHLLDL 551
Query: 431 I----EENDGK----RILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+ ++NDG L+FVETK+ AD + L N N + R+
Sbjct: 552 LSNITKQNDGDDENCLTLIFVETKKAADSLEEFLYNHNFPVTSIHGDRTQAEREEALRLF 611
Query: 587 RVG 595
R G
Sbjct: 612 RCG 614
>UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium
falciparum|Rep: DEAD box DNA helicase - Plasmodium
falciparum
Length = 516
Score = 112 bits (270), Expect = 9e-24
Identities = 51/103 (49%), Positives = 70/103 (67%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L C K C + Q SIHGD+ QRER+ L N+K+ + ILVAT VA+
Sbjct: 376 KILIFCDTKRNCDNLGKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVAS 435
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
RGLDIKN+ +V+NYD+P +I++Y+HRIGRTGR G +GK++ F+
Sbjct: 436 RGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFF 478
Score = 71.3 bits (167), Expect = 3e-11
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K YGG +Q +N+ +G I+VATPGRL DF+E ++ +VV+DEADR+LD
Sbjct: 230 IKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLDFLENGNINLLKCIYVVIDEADRLLD 289
Query: 192 MGFMPSIEKMM 224
MGF + K+M
Sbjct: 290 MGFEKQLRKIM 300
Score = 41.5 bits (93), Expect = 0.026
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG---ASTDVEQIFIEVTKYEKRNSLK 424
+Q L +AT+PE ++ LA F Y V + I A+ ++EQ I + + + L
Sbjct: 307 KQLLFLTATWPEQVRKLAYDFCA-YDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLL 365
Query: 425 QLIEEN-DGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
++EN + +IL+F +TKRN D + LR + L +I + R+R RIL
Sbjct: 366 DWLKENYENNKILIFCDTKRNCDNLGKELRYHQYNAL---SIHGDKQQRERDRIL 417
>UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4;
Protostomia|Rep: ATP-dependent RNA helicase bel -
Drosophila melanogaster (Fruit fly)
Length = 798
Score = 112 bits (270), Expect = 9e-24
Identities = 53/78 (67%), Positives = 65/78 (83%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGDR Q+EREEAL+ F+SG ILVATAVAARGLDI +V V+N+DLP ++EYVHR
Sbjct: 587 TSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVINFDLPSDVEEYVHR 646
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGR+GN G A SF++
Sbjct: 647 IGRTGRMGNLGVATSFFN 664
Score = 87.0 bits (206), Expect = 5e-16
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ AV YGG Q + RGCH++VATPGRL D + R +V ++RF+VLDEADRM
Sbjct: 405 SRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRM 464
Query: 186 LDMGFMPSIEKMMLHPTMVET 248
LDMGF P I +++ M T
Sbjct: 465 LDMGFEPQIRRIVEQLNMPPT 485
Score = 79.4 bits (187), Expect = 1e-13
Identities = 50/120 (41%), Positives = 71/120 (59%), Gaps = 7/120 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTLMFSATFP+ IQ LA FL+NY+F+AVG VG S ++ Q + V + +KR+ L L
Sbjct: 487 QRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDL 546
Query: 431 IEE-NDGKR------ILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILR 589
+ DG L+FVETK+ AD + L C+H T+I + + ++R LR
Sbjct: 547 LSSIRDGPEYTKDSLTLIFVETKKGADSLEEFL--YQCNH-PVTSIHGDRTQKEREEALR 603
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 112 bits (269), Expect = 1e-23
Identities = 53/103 (51%), Positives = 70/103 (67%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L C K C + Q +IHGD+ QRER+ L N++S + ILVAT VA+
Sbjct: 576 KILIFCDTKRNCDSLCKELRYHQYNALAIHGDKEQRERDRILSNYRSDRCNILVATDVAS 635
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
RGLDIKN+ +VVNYDLP +I++Y+HRIGRTGR G +G+AV F+
Sbjct: 636 RGLDIKNISVVVNYDLPNTIEDYIHRIGRTGRAGQKGRAVLFF 678
Score = 62.9 bits (146), Expect = 1e-08
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ YGG Q N+ +G I+VATPGRL D +E + +VV+DEADR+LD
Sbjct: 430 IRSVAVYGGVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLLRCIYVVIDEADRLLD 489
Query: 192 MGFMPSIEKMM 224
MGF ++K+M
Sbjct: 490 MGFEKQLKKIM 500
Score = 47.6 bits (108), Expect = 4e-04
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Frame = +2
Query: 245 DHERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNS 418
+ +Q L F+AT+PE ++ LA +F + + + + +G A+ +++Q + + + +
Sbjct: 504 NRNKQLLFFTATWPEQVRKLAYQFSSFDPVKIQIGKSELTANKNIQQSVVISSSIDLKKK 563
Query: 419 LKQLIEEN-DGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
L +++N +G +IL+F +TKRN D + LR + L AI + R+R RIL
Sbjct: 564 LLDWLKQNYEGNKILIFCDTKRNCDSLCKELRYHQYNAL---AIHGDKEQRERDRIL 617
>UniRef50_P24784 Cluster: ATP-dependent RNA helicase DBP1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 617
Score = 111 bits (267), Expect = 2e-23
Identities = 54/83 (65%), Positives = 61/83 (73%)
Frame = +1
Query: 514 QQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSID 693
Q ++IHGDR Q ERE AL FK+ ILVATAVAARGLDI NV V+NYDLP ID
Sbjct: 434 QNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDID 493
Query: 694 EYVHRIGRTGRVGNRGKAVSFYD 762
+YVHRIGRTGR GN G A SF++
Sbjct: 494 DYVHRIGRTGRAGNTGVATSFFN 516
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ V YGG + +Q + RGC +LVATPGRL+D +ER +VS +++++VLDEADRM
Sbjct: 264 SWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRM 323
Query: 186 LDMGFMPSIEKMM 224
LDMGF P I ++
Sbjct: 324 LDMGFEPQIRHIV 336
Score = 84.2 bits (199), Expect = 4e-15
Identities = 49/111 (44%), Positives = 67/111 (60%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTLMFSATFP DIQHLA FL+NY+F++VG VG S ++ Q + V +K+++L L+
Sbjct: 347 RQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSENITQRILYVDDMDKKSALLDLL 406
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
L+FVETKR AD + L N + TAI + + +R R L
Sbjct: 407 SAEHKGLTLIFVETKRMADQLTDFLIMQN---FKATAIHGDRTQAERERAL 454
>UniRef50_Q9GV12 Cluster: Vasa-related protein CnVAS2; n=14;
Eumetazoa|Rep: Vasa-related protein CnVAS2 - Hydra
magnipapillata (Hydra)
Length = 890
Score = 109 bits (263), Expect = 6e-23
Identities = 51/92 (55%), Positives = 71/92 (77%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++ ++++ + + DR + +RE AL++F++G ILVATAVAARGLDI +V V+NYD
Sbjct: 720 ANFLSQKNFPPTILFADRTREKRESALRDFRNGIAPILVATAVAARGLDINDVKHVINYD 779
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYDLIR 771
LPK +EYVHRIGRTGR+GN+GKA SF+DL R
Sbjct: 780 LPKDANEYVHRIGRTGRIGNKGKATSFFDLDR 811
Score = 101 bits (242), Expect = 2e-20
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
R TLMFSATFP+ IQHLA +FLN+YLF+ VG VGG TDV Q I+V+ +KR +L+ L+
Sbjct: 639 RNTLMFSATFPDQIQHLAAQFLNDYLFLTVGRVGGTCTDVTQSVIQVSGTKKRETLENLL 698
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSN 520
+ + + LVFVE KR+ADF+A L N
Sbjct: 699 QTSGTDQTLVFVEKKRDADFLANFLSQKN 727
Score = 98.7 bits (235), Expect = 2e-19
Identities = 41/73 (56%), Positives = 57/73 (78%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S LK V YGG AV HQ D + GCH+LVATPGRL DF++R +V+F ++++++LDEAD+M
Sbjct: 556 SSLKPVVLYGGVAVAHQADRLRMGCHLLVATPGRLEDFIKRGKVNFQNLKYLILDEADKM 615
Query: 186 LDMGFMPSIEKMM 224
+DMGF P IE ++
Sbjct: 616 IDMGFGPQIEHII 628
>UniRef50_Q9GV07 Cluster: Vasa-related protein PlVAS1; n=1; Dugesia
dorotocephala|Rep: Vasa-related protein PlVAS1 - Dugesia
dorotocephala
Length = 573
Score = 109 bits (261), Expect = 1e-22
Identities = 50/78 (64%), Positives = 62/78 (79%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++IHGDR Q +RE AL +FKSG+ +VAT VAARGLDI VD V+N D+P +ID YVHR
Sbjct: 398 TTIHGDREQEQRESALNDFKSGRINFMVATNVAARGLDIPKVDNVINIDMPDTIDTYVHR 457
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGR GN G+A+SF+D
Sbjct: 458 IGRTGRCGNVGRAISFFD 475
Score = 83.4 bits (197), Expect = 6e-15
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 230 SNHGGDHERQT--LMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKY 403
++ GD +R MFSATFP +IQ LA R L+NYLF+AVG+VG A+ DV+Q I +
Sbjct: 296 AHQSGDADRSIHLSMFSATFPNEIQTLASRLLSNYLFLAVGVVGSANCDVKQEIIRAEQR 355
Query: 404 EKRNSLKQLIEENDGKRILVFVETKRNADFIAAML 508
+K S +LI+ ++ L+FVE+KR ADF L
Sbjct: 356 DKVTSAIELIKTIPDEKTLIFVESKRMADFFGIKL 390
Score = 63.7 bits (148), Expect = 6e-09
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNI-ARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEAD 179
GS ++ A YGG + NI A GC ILVATPGRL F+E VS +++ VLDEAD
Sbjct: 218 GSNIRCAYMYGGIEMNKSRRNIQATGCDILVATPGRLIHFLELVWVSLRYIKYFVLDEAD 277
Query: 180 RMLD-MGFMPSIEKM 221
RMLD GF + K+
Sbjct: 278 RMLDEEGFYEVVNKI 292
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 108 bits (260), Expect = 1e-22
Identities = 55/83 (66%), Positives = 63/83 (75%)
Frame = +1
Query: 514 QQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSID 693
QQ+ + SIHGD Q ERE L+ F+SG+ ILVATAVAARGLDI NV V+NYDLP D
Sbjct: 421 QQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSD 480
Query: 694 EYVHRIGRTGRVGNRGKAVSFYD 762
EYVHRIGRTGR GN G A SF++
Sbjct: 481 EYVHRIGRTGRCGNLGIATSFFN 503
Score = 80.6 bits (190), Expect = 5e-14
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 2/116 (1%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ- 427
R T MFSATFP++IQ LA FL +NY+F+AVG VG S ++EQ + V + EKR++L +
Sbjct: 332 RTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSENIEQRLLWVNEMEKRSNLMEI 391
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILRVG 595
L+ E+ +LVFVETKR A+ +A L + + + + R G
Sbjct: 392 LMNEHSENLVLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSG 447
Score = 76.2 bits (179), Expect = 1e-12
Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTA-VRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
S ++ A+ YGG R Q + + G HIL+ATPGRL D +E+ + R++VLDEADR
Sbjct: 249 SNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADR 308
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF P I K++
Sbjct: 309 MLDMGFEPQIRKIV 322
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 108 bits (260), Expect = 1e-22
Identities = 51/78 (65%), Positives = 64/78 (82%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++IHGDR Q+ERE AL++FK+G+ ILVAT VAARGLDI +V VVN+DLP ID+YVHR
Sbjct: 433 TTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHR 492
Query: 709 IGRTGRVGNRGKAVSFYD 762
IGRTGR GN G A +F++
Sbjct: 493 IGRTGRAGNSGLATAFFN 510
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+KV VAYGGT V Q + RG ILVATPGRL+D +ER RVS VRF+ LDEADRMLD
Sbjct: 253 VKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLD 312
Query: 192 MGFMPSIEKMM 224
MGF P I K++
Sbjct: 313 MGFEPQIRKIV 323
Score = 70.1 bits (164), Expect = 6e-11
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQT++FSATFP +IQ LA FL+NY+F+AVG VG ++ + Q V +KR+ L L+
Sbjct: 334 RQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLL 393
Query: 434 EE-----NDGKR--ILVFVETKRNAD 490
N GK+ LVFVETK+ AD
Sbjct: 394 HAQRENGNQGKQALTLVFVETKKGAD 419
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 107 bits (258), Expect = 3e-22
Identities = 52/82 (63%), Positives = 62/82 (75%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
+Q SIHGDR Q+ERE AL+ F+SG+ ILVAT VAARGLDI N+ V+N D+P +I
Sbjct: 481 DQNFPAVSIHGDRSQQEREHALRLFRSGQRPILVATDVAARGLDIPNITHVINLDMPCNI 540
Query: 691 DEYVHRIGRTGRVGNRGKAVSF 756
D+YVHRIGRTGR GN G A SF
Sbjct: 541 DDYVHRIGRTGRAGNTGLATSF 562
Score = 83.8 bits (198), Expect = 5e-15
Identities = 38/86 (44%), Positives = 58/86 (67%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ ++ V YGG+ VR Q ++ RG I+VATPGRL D ++R +V+ ++F++LDEADR
Sbjct: 310 GTGIRTNVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADR 369
Query: 183 MLDMGFMPSIEKMMLHPTMVETTKGK 260
MLDMGF P I +++ M + G+
Sbjct: 370 MLDMGFAPQIREIVEDSEMPHSLDGR 395
Score = 73.3 bits (172), Expect = 7e-12
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGAS-TDVEQIFIEVTKYEKRNSLKQL 430
RQT+MFSATFP +IQ LA FL+NY+F+ VG VG S + V+++ ++ R +K L
Sbjct: 395 RQTVMFSATFPREIQQLAKDFLHNYIFLTVGRVGATSGSIVQRVVYAEEDHKPRLLVKLL 454
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSN 520
+E+ +G + VFVE KR AD I L + N
Sbjct: 455 LEQGEGLTV-VFVEMKRRADQIEDFLIDQN 483
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 107 bits (257), Expect = 3e-22
Identities = 49/81 (60%), Positives = 65/81 (80%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
L ++IHGD++Q ERE A+++FKSG I+VAT VAARGLDI +V V+N+DLPK+ID+Y
Sbjct: 557 LAATAIHGDKVQMERERAMKSFKSGATPIMVATDVAARGLDIPHVAHVINFDLPKAIDDY 616
Query: 700 VHRIGRTGRVGNRGKAVSFYD 762
VHRIGRTGR G G A +F++
Sbjct: 617 VHRIGRTGRAGKSGLATAFFN 637
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/71 (59%), Positives = 51/71 (71%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LKV VAYGG + Q N+ RG ILVATPGRL D +ER RVS ++++ LDEADRMLD
Sbjct: 225 LKVVVAYGGAPISQQFRNLERGVDILVATPGRLVDMIERARVSLRMIKYLALDEADRMLD 284
Query: 192 MGFMPSIEKMM 224
MGF P I K++
Sbjct: 285 MGFEPQIRKIV 295
Score = 37.9 bits (84), Expect = 0.32
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 12/88 (13%)
Frame = +2
Query: 281 FPEDIQH--LAGRFLNNYLFVAVGIVGGASTD--VEQI-FIEVTKYEKRNSLKQLIEEND 445
FPE ++ L F NY+F++VG V G+STD V+++ F+E T +KR L L++
Sbjct: 468 FPEKVKEIGLLRIFYANYIFLSVGRV-GSSTDLIVQRVEFVEDT--DKRYHLMDLLQSQM 524
Query: 446 GKR-------ILVFVETKRNADFIAAML 508
R LVFVETKR D + L
Sbjct: 525 TNRTPKKYALTLVFVETKRGVDALEQWL 552
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 107 bits (257), Expect = 3e-22
Identities = 53/87 (60%), Positives = 63/87 (72%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
++ Q +IHGD Q ERE+ L F++G ILVATAVAARGLDI NV V+NYDLP
Sbjct: 439 YLNRQNYQVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARGLDIPNVKHVINYDLP 498
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+DEYVHRIGRTGRVGN G A SF++
Sbjct: 499 SDVDEYVHRIGRTGRVGNVGLATSFFN 525
Score = 76.2 bits (179), Expect = 1e-12
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
ER T MFSATFP++IQ LA FL NY+F+AVG VG S ++ Q + V + EKR+ L
Sbjct: 353 ERVTAMFSATFPKEIQLLAQDFLKQNYVFLAVGRVGSTSENIMQKIVWVEEDEKRSYLMD 412
Query: 428 LIE-ENDGKRILVFVETKRNADFIAAMLRNSN 520
L++ D LVFVETKR A +A L N
Sbjct: 413 LLDATGDSSLTLVFVETKRGASDLAYYLNRQN 444
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +3
Query: 21 AVAYGGTA-VRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMG 197
A+ YGG + Q + GCHIL+ATPGRL D +E+ + R++VLDEADRMLDMG
Sbjct: 275 ALLYGGRENYKDQIHKLRLGCHILIATPGRLLDVMEQGLIGLEGCRYLVLDEADRMLDMG 334
Query: 198 FMPSIEKMM 224
F P I +++
Sbjct: 335 FEPQIRQVV 343
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 107 bits (257), Expect = 3e-22
Identities = 53/103 (51%), Positives = 69/103 (66%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L C K C + +Q S+IHGD+ Q ERE+ L +F+SG+ ILVAT VAA
Sbjct: 397 KVLIFCTTKRMCD-QLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVATDVAA 455
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
RGLDIK++ +V+NYD P I++YVHRIGRTGR G G A +F+
Sbjct: 456 RGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFF 498
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/65 (52%), Positives = 45/65 (69%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG Q ++ RG ++VATPGRL+D +E R+S V ++VLDEADRMLDMGF P
Sbjct: 257 YGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQ 316
Query: 210 IEKMM 224
I K++
Sbjct: 317 IRKIV 321
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG--ASTDVEQIFIEVTKYEKRNSLKQ 427
RQTLM++AT+P++++ +A L + + V +G V A++ + Q +T EK L+Q
Sbjct: 328 RQTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQ 387
Query: 428 LIEEND-GKRILVFVETKRNADFIAAML 508
++ D G ++L+F TKR D +A L
Sbjct: 388 ILRSQDSGSKVLIFCTTKRMCDQLARTL 415
>UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;
Tetrahymena thermophila SB210|Rep: P68-like protein,
putative - Tetrahymena thermophila SB210
Length = 699
Score = 105 bits (253), Expect = 1e-21
Identities = 47/104 (45%), Positives = 70/104 (67%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K + + K C S + + IHGD+ QR+R++ + FK+G+ L+AT VA+
Sbjct: 461 KTIIFTQTKKDCDDLSKALQTDNIRNICIHGDKSQRDRDKVMDLFKTGRVNTLIATDVAS 520
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
RGLD+K++ +V+NYD PK I++YVHR+GRTGR G +GKA+SF D
Sbjct: 521 RGLDVKDIKLVINYDFPKQIEDYVHRVGRTGRAGAQGKAISFLD 564
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 GSVLKVA--VAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEA 176
GS K++ YGG +Q + GC I++ATPGRL DF+E N + V ++VLDEA
Sbjct: 310 GSKCKISSVCVYGGAPKIYQEKELRNGCDIVIATPGRLIDFLESNVIDLKRVTYLVLDEA 369
Query: 177 DRMLDMGFMPSIEKMM 224
DRMLDMGF PSI K++
Sbjct: 370 DRMLDMGFEPSIRKIV 385
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/97 (25%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVG-IVGGASTDVEQIFIEVTKYEKRNSLK 424
+RQTLMFSAT+P+ ++ LA F + + + + +G + + D++Q + K +K + +K
Sbjct: 391 DRQTLMFSATWPQTVRRLALDFCHGDPIHIQIGDMENNVNNDIDQQVEIIDKSQKYDRVK 450
Query: 425 QLIEE-NDGKRILVFVETKRNADFIAAMLRNSNCSHL 532
+++ + ++F +TK++ D ++ L+ N ++
Sbjct: 451 EILSTMTRSDKTIIFTQTKKDCDDLSKALQTDNIRNI 487
>UniRef50_Q0CX32 Cluster: DEAD-box protein 3; n=11;
Pezizomycotina|Rep: DEAD-box protein 3 - Aspergillus
terreus (strain NIH 2624)
Length = 590
Score = 105 bits (252), Expect = 1e-21
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
+ L +K L ++ L ++SIH DR QRERE+AL+ F+S K ILVAT V+A
Sbjct: 391 RTLVFVNSKVQADLVDDYLYNMGLPSTSIHSDRTQREREDALRAFRSAKCPILVATGVSA 450
Query: 631 RGLDIKNVDIVVNYDLPKS----IDEYVHRIGRTGRVGNRGKAVSFYD 762
RGLDIKNV V+NY LP + I EY+HRIGRT R+GN G A SFY+
Sbjct: 451 RGLDIKNVMHVINYQLPSASNGGITEYIHRIGRTARIGNEGLATSFYN 498
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRV-SFGSVRFVVLDEADR 182
S+L+ V YGG VR Q + + +GC IL+ TPGRL DF+++ + S VR+ ++DEAD
Sbjct: 240 SMLRPCVVYGGAPVRDQREELQKGCDILIGTPGRLLDFMDKPHILSLRRVRYTIIDEADE 299
Query: 183 MLDMGFMPSIEKMM 224
+L + ++M
Sbjct: 300 LLQSDWESDFNRIM 313
Score = 53.6 bits (123), Expect = 6e-06
Identities = 37/116 (31%), Positives = 62/116 (53%), Gaps = 1/116 (0%)
Frame = +2
Query: 245 DHERQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSL 421
D + + +MFSATF ++ + LA +FL ++++ V +G G +V+Q + V + K+ +L
Sbjct: 321 DADHRYMMFSATFNKECRQLARKFLSDDHVRVRIGRPGSTHVNVDQRIVFVEDHLKKQAL 380
Query: 422 KQLIEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILR 589
L+ R LVFV +K AD + L N L T+I + + R+R LR
Sbjct: 381 YDLLLSMPPSRTLVFVNSKVQADLVDDYLYNMG---LPSTSIHSDRTQREREDALR 433
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 105 bits (251), Expect = 2e-21
Identities = 51/98 (52%), Positives = 68/98 (69%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C K C + ++A +Q S+IHGD+ Q ER+ L F+SG+ ILVAT VAARGLDI
Sbjct: 483 CSTKRMCDQLARNLA-RQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDI 541
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
K++ +VVNYD P +++YVHRIGRTGR G G A +F+
Sbjct: 542 KDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFF 579
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG Q ++ RG I+VATPGRL+D +E RVS V ++VLDEADRMLDMGF P
Sbjct: 338 YGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQ 397
Query: 210 IEKMM 224
I K++
Sbjct: 398 IRKIV 402
Score = 52.8 bits (121), Expect = 1e-05
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG--ASTDVEQIFIEVTKYEKRNSLK 424
+RQTLMF+AT+P++++ +A L+N + V +G A+ + Q +T EK L
Sbjct: 408 KRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLD 467
Query: 425 QLIEEND-GKRILVFVETKRNADFIAAML 508
Q++ + G +I++F TKR D +A L
Sbjct: 468 QILRSQEPGSKIIIFCSTKRMCDQLARNL 496
>UniRef50_A7U5X1 Cluster: DEAD-box helicase 11; n=11;
Plasmodium|Rep: DEAD-box helicase 11 - Plasmodium
falciparum
Length = 941
Score = 105 bits (251), Expect = 2e-21
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
++ Q+L IHGD+ Q ERE AL+ FK G ILVAT VAARGLDI N+ V+N+DLP
Sbjct: 665 LSNQKLNAVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPS 724
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSF 756
+ID+Y+HRIGRTGR GN G A SF
Sbjct: 725 NIDDYIHRIGRTGRAGNIGIATSF 748
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K V YGG ++ Q N+ +G I+VATPGRL+D +E+ ++ F+VLDEADRMLD
Sbjct: 480 IKPVVLYGGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLD 539
Query: 192 MGFMPSIEKMM 224
MGF P I ++
Sbjct: 540 MGFSPQIRSIV 550
Score = 74.1 bits (174), Expect = 4e-12
Identities = 45/114 (39%), Positives = 64/114 (56%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT+MFSATF ++IQ LA +L Y F+ VG VG + ++Q + V + K N L L
Sbjct: 580 KRQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNL 639
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILRV 592
+ EN+ ++FVETKR AD I L N L I + S +R R L++
Sbjct: 640 LAENNNGLTILFVETKRKADIIERFLSNQK---LNAVCIHGDKSQDERERALKL 690
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 104 bits (250), Expect = 2e-21
Identities = 49/98 (50%), Positives = 69/98 (70%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C KT SS + +S+HGDR Q +RE+AL++ KSG +L+AT VA+RGLDI
Sbjct: 576 CGRKTRADDLSSEFVLSGINCTSLHGDREQADREQALEDIKSGDVRVLIATDVASRGLDI 635
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
+++ VVNYD P++I+EYVHR+GRTGR G G ++SF+
Sbjct: 636 EDISHVVNYDFPRNIEEYVHRVGRTGRAGRSGVSLSFF 673
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K YGG R Q + + G I++ATPGRL+D V N + S+ ++VLDEADRMLD
Sbjct: 426 IKAICLYGGGDRRTQINKVKGGVEIIIATPGRLNDLVAANVIDITSITYLVLDEADRMLD 485
Query: 192 MGFMPSIEKMML 227
MGF P I K++L
Sbjct: 486 MGFEPQIRKLLL 497
Score = 42.7 bits (96), Expect = 0.011
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT+M SAT+P ++ LA +++N + V VG + A+T IEV E +
Sbjct: 502 DRQTIMTSATWPPGVRRLAQSYMSNPVQVYVGTLDLAATHTVTQQIEVIDEEDKYMRVMN 561
Query: 431 IEENDG--KRILVFVETKRNADFIAA--MLRNSNCSHL 532
N G ++++F K AD +++ +L NC+ L
Sbjct: 562 FVTNMGPSDKVIIFCGRKTRADDLSSEFVLSGINCTSL 599
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 104 bits (250), Expect = 2e-21
Identities = 46/103 (44%), Positives = 71/103 (68%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L C K C + + + ++HGD+ Q ER+ + +F++G+ L+AT VA+
Sbjct: 396 KILIFCSTKKGCDQLQKTLDREGIRCLALHGDKKQTERDYVMSHFRNGRSTALIATDVAS 455
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
RGLDIK++++VVNYD+PK I++YVHRIGRTGR G G+++SF+
Sbjct: 456 RGLDIKDIEVVVNYDMPKVIEDYVHRIGRTGRAGAIGQSISFF 498
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/74 (47%), Positives = 45/74 (60%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
GS L A YGG Q + +G IL+A PGRL D +++ + V F+VLDEADR
Sbjct: 230 GSQLYAACLYGGQDRYIQKSQLRKGPQILIACPGRLIDLLDQGCTTLKQVSFLVLDEADR 289
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF P I K++
Sbjct: 290 MLDMGFEPQIRKIV 303
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 104 bits (250), Expect = 2e-21
Identities = 44/75 (58%), Positives = 58/75 (77%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD+ Q ER+ L F+SGK C+L+AT VAARGLDIK++ +V+NYD P +++YVHRIG
Sbjct: 709 IHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIG 768
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G G A +F+
Sbjct: 769 RTGRAGATGVAFTFF 783
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG Q + RG I+VATPGRL+D +E + F V +VLDEADRMLDMGF P
Sbjct: 542 YGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQ 601
Query: 210 IEKMM 224
I K++
Sbjct: 602 IRKIV 606
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG--GASTDVEQIFIEVTKYEKRNSLKQ 427
RQTLM++AT+P++++ +A L N + V +G V A+ + Q V + EK L+Q
Sbjct: 613 RQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQ 672
Query: 428 LIEEND-GKRILVFVETKRNADFIA 499
++ + G ++++F TKR D +A
Sbjct: 673 ILRSQERGSKVIIFCSTKRLCDHLA 697
>UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 619
Score = 104 bits (249), Expect = 3e-21
Identities = 51/87 (58%), Positives = 64/87 (73%), Gaps = 4/87 (4%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK-- 684
E +L +S+H DR QRERE+AL+ F++G ILV T V ARG+D++NV VVNYDLP
Sbjct: 409 ECKLPCTSMHADRTQREREDALRAFRAGTAPILVTTGVTARGIDVRNVAHVVNYDLPSMD 468
Query: 685 --SIDEYVHRIGRTGRVGNRGKAVSFY 759
I+EY HRIGRTGR+GN+G A SFY
Sbjct: 469 HGGIEEYTHRIGRTGRIGNKGLATSFY 495
Score = 56.8 bits (131), Expect = 6e-07
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVER-NRVSFGSVRFVVLDEADR 182
S+L+ V YGG Q I GC IL ATPGRL F+++ ++ VR+VV+DEAD
Sbjct: 239 SMLRPGVVYGGGNFMDQIRQIGLGCDILCATPGRLLHFMDKPELLNLQRVRYVVIDEADE 298
Query: 183 MLDMGFMPSIEKMM 224
ML + ++K+M
Sbjct: 299 MLTADWEEDMKKIM 312
Score = 55.6 bits (128), Expect = 1e-06
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Frame = +2
Query: 224 VTSNHGGDHERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGASTDVEQIFIEVTK 400
+ S G E + L+FSATFP+ I+ LA L+ +++ + VG G +++ Q IE
Sbjct: 311 IMSAGGAAQEIKYLLFSATFPKKIRDLAREHLSEDHVQLRVGRAGSTHSNIIQTVIETAP 370
Query: 401 YEKRNSLKQLIEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYR 580
K+ +L LI +R ++FV K AD + L N C L T++ + + R+R
Sbjct: 371 MNKKRALNDLINSMPPQRTIIFVNNKWTADELDDYLYN-ECK-LPCTSMHADRTQRERED 428
Query: 581 ILR 589
LR
Sbjct: 429 ALR 431
>UniRef50_A5DU73 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetales|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 597
Score = 104 bits (249), Expect = 3e-21
Identities = 47/93 (50%), Positives = 65/93 (69%)
Frame = +1
Query: 484 CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
C + S + + LL IHG + Q REEAL++F++ + ILVAT VAARG+D+ NV +V
Sbjct: 474 CDVLSLELEQNNLLNVVIHGSKSQEAREEALEDFRTHQAPILVATDVAARGIDVPNVSLV 533
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+NY + K DEY+HRIGRTGR GN G++ +F D
Sbjct: 534 INYQMSKKFDEYIHRIGRTGRAGNLGESYTFLD 566
Score = 63.3 bits (147), Expect = 7e-09
Identities = 27/53 (50%), Positives = 38/53 (71%)
Frame = +3
Query: 66 IARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
+ RG HI+V TPGRL D VER ++F ++V+DEADRM+DMGF + K++
Sbjct: 315 VGRGVHIVVGTPGRLLDSVERKILNFSKCYYLVMDEADRMIDMGFEKDLNKLI 367
>UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5;
Viridiplantae|Rep: DEAD box protein P68 - Pisum sativum
(Garden pea)
Length = 622
Score = 103 bits (248), Expect = 4e-21
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 475 KT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNV 654
KT C + + Q L S+HG Q ERE ALQNF+S ILVAT VA+RGLD+ V
Sbjct: 381 KTRCDEVAEALVAQGLSAVSLHGGHSQNEREAALQNFRSSSTSILVATDVASRGLDVTGV 440
Query: 655 DIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
V+N DLPK+ ++Y+HRIGRTGR G+ G A SFY
Sbjct: 441 SHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFY 475
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK + GGT + Q + G I VATPGR D +++ S + +VVLDEADRMLD
Sbjct: 221 LKNCIVVGGTNIEKQRSELRAGVEIAVATPGRFIDHLQQGNTSLSRISYVVLDEADRMLD 280
Query: 192 MGFMPSIEKMM 224
MGF P I ++M
Sbjct: 281 MGFEPQIREIM 291
Score = 51.6 bits (118), Expect = 2e-05
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+ QTL+FSAT P +I+ LA +L N + V VG V +T+V Q ++V+ EK + L L
Sbjct: 297 KHQTLLFSATMPVEIEALAKEYLANPVQVKVGKVSSPTTNVSQTLVKVSGSEKIDRLLDL 356
Query: 431 I------EENDGKRI---LVFVETKRNADFIAAML 508
+ E G R +VFVE K D +A L
Sbjct: 357 LVEEASQAEKCGHRFPLTIVFVERKTRCDEVAEAL 391
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 102 bits (245), Expect = 1e-20
Identities = 46/76 (60%), Positives = 58/76 (76%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGD+ Q ER+ L FKSGK I+ AT VAARGLD+K+V V+NYD P S+++YVHRI
Sbjct: 341 SIHGDKSQAERDWVLSEFKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRI 400
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G +G A +F+
Sbjct: 401 GRTGRAGAKGTAYTFF 416
Score = 63.7 bits (148), Expect = 6e-09
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G ++ V AV+ Q + G I++ATPGRL D +E + + + ++VLDEADR
Sbjct: 166 GPIVLVLAPTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHHTNLRRITYLVLDEADR 225
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF P I+K++
Sbjct: 226 MLDMGFEPQIKKIV 239
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV-TKYEKRNSLKQ 427
+RQTL +SAT+P++++ LA FL + V +G + +E+ ++ +K N L
Sbjct: 245 DRQTLYWSATWPKEVEQLARNFLFDPYKVIIGSEELKANHAISQHVEILSESQKYNKLVN 304
Query: 428 LIEE-NDGKRILVFVETKRNADFIAAMLR 511
L+E+ DG RIL+F++TK+ D I LR
Sbjct: 305 LLEDIMDGSRILIFMDTKKGCDQITRQLR 333
>UniRef50_Q2H4C0 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 602
Score = 102 bits (245), Expect = 1e-20
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK----SIDE 696
+S+HGDR Q ERE A++ F+ GK IL+AT V ARG+D++NV V+NYDLP I+E
Sbjct: 389 TSMHGDRNQLEREAAMRGFRGGKWPILIATGVTARGIDVRNVMHVINYDLPSMEYGGIEE 448
Query: 697 YVHRIGRTGRVGNRGKAVSFY 759
Y HRIGRTGR+G+RG A SFY
Sbjct: 449 YTHRIGRTGRIGHRGLATSFY 469
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVER-NRVSFGSVRFVVLDEADR 182
++L+ V YGG A+R Q + +GC IL+A+PGRL F+ + ++ VR++V+DEAD
Sbjct: 232 TMLRPCVVYGGGALRDQAQQLQKGCDILIASPGRLIHFINKPETLTLRRVRYMVIDEADE 291
Query: 183 ML 188
ML
Sbjct: 292 ML 293
>UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;
Cryptosporidium|Rep: U5 snRNP 100 kD protein, putative -
Cryptosporidium parvum Iowa II
Length = 529
Score = 102 bits (244), Expect = 1e-20
Identities = 46/76 (60%), Positives = 57/76 (75%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+S+HG +MQ RE +L FKSG ILV+T VA RG+DI N+++V+NYD PKSID Y HR
Sbjct: 424 TSLHGGKMQEVRENSLNLFKSGVFDILVSTDVAGRGIDINNINLVINYDFPKSIDTYTHR 483
Query: 709 IGRTGRVGNRGKAVSF 756
IGRTGR G G A+SF
Sbjct: 484 IGRTGRAGKNGIAISF 499
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG + Q ++ +G I++ATPGR+ D +E+ +V+LDEADRM+D+GF S+
Sbjct: 258 GGRNIDQQAFSLRKGVEIIIATPGRMQDCLEKTLTVLVQCSYVILDEADRMIDLGFQDSL 317
Query: 213 EKMM--LHPTMVETT 251
++ + P + TT
Sbjct: 318 NFILDQIPPEIQRTT 332
Score = 49.2 bits (112), Expect = 1e-04
Identities = 23/84 (27%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+R T MFSAT ++++++A R+LN+ + V +G +G ++QI +++ +K+++L
Sbjct: 329 QRTTHMFSATMQKELENIAKRYLNSPINVTIGDIGAGKKSIQQILNFISENKKKSTLINT 388
Query: 431 IEEND--GKRILVFVETKRNADFI 496
+ + I+VF+ K+ D +
Sbjct: 389 LNNKELAVPPIIVFLNQKKMVDIV 412
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 102 bits (244), Expect = 1e-20
Identities = 43/77 (55%), Positives = 60/77 (77%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++IHGD+ Q ER++ L F+SG+ +LVAT VAARGLD+K++ +VVNYD P +++YVHR
Sbjct: 433 AAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHR 492
Query: 709 IGRTGRVGNRGKAVSFY 759
IGRTGR G G A +F+
Sbjct: 493 IGRTGRAGATGLAYTFF 509
Score = 77.0 bits (181), Expect = 6e-13
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S + A YGG Q I RG I+VATPGRL+D +E R+S V ++VLDEADRM
Sbjct: 260 SKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRM 319
Query: 186 LDMGFMPSIEKMMLH-PTMVET 248
LDMGF P I K++ PT +T
Sbjct: 320 LDMGFEPQIRKIVNEVPTKRQT 341
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG--ASTDVEQIFIEVTKYEKRNSLK 424
+RQTLM++AT+P++++ +A L N V +G V A+ + Q + EK + L+
Sbjct: 338 KRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLE 397
Query: 425 QLIEEND-GKRILVFVETKRNADFIAAML 508
Q++ + G +I++F TKR D +A L
Sbjct: 398 QILRSQEPGSKIIIFCSTKRMCDQLARNL 426
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 101 bits (243), Expect = 2e-20
Identities = 46/88 (52%), Positives = 65/88 (73%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
SS + +T IHG+R Q +RE+A+ + KSG ILVAT VA+RGLDI+++ V+NYD
Sbjct: 546 SSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYD 605
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
P +I+EYVHR+GRTGR G +G ++SF+
Sbjct: 606 FPHNIEEYVHRVGRTGRAGRQGTSISFF 633
Score = 74.5 bits (175), Expect = 3e-12
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K YGG Q ++ RG I++ TPGRL+D + N + ++ ++VLDEADRMLD
Sbjct: 385 MKAVCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLD 444
Query: 192 MGFMPSIEKMML 227
MGF P I K+ML
Sbjct: 445 MGFEPQIRKVML 456
Score = 41.5 bits (93), Expect = 0.026
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGAST-DVEQIF-IEVTKYEKRNSLK 424
+RQT+M SAT+P ++ LA ++ N + V VG + A+T V+QI + +K N++
Sbjct: 461 DRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTIT 520
Query: 425 QLIEE-NDGKRILVFVETKRNADFIAAML 508
++ + +I++F K AD +++ L
Sbjct: 521 SFVKNMSSTDKIIIFCGRKVRADDLSSEL 549
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 101 bits (243), Expect = 2e-20
Identities = 47/89 (52%), Positives = 65/89 (73%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+S ++ +++ + G+ Q ER+E++ F+ G +LVATA+AARGLDI VD V+NYD
Sbjct: 485 ASALSMEEVPAVELQGELSQMERDESMHRFRYGDAFVLVATAIAARGLDIVGVDHVINYD 544
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
LP I EYVHRIGRTGRVG+ G+A SF+D
Sbjct: 545 LPSHIYEYVHRIGRTGRVGHLGRATSFFD 573
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ ++V + +GG VRH + G +LVATPGRL F+ +S F+VLDEADR
Sbjct: 312 GTSVRVHLTHGGVNVRHDLMQLRSGVSVLVATPGRLLHFIRSGLISLSMCNFIVLDEADR 371
Query: 183 MLDMGFMPSIEKMMLH 230
+LD GF + + + H
Sbjct: 372 LLDEGFEGEMREFLEH 387
Score = 49.6 bits (113), Expect = 1e-04
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQ +M SATF ++++ L L + + V VG+VG + Q I V +K + L +L+
Sbjct: 396 RQVVMLSATFEDEVRDLGMSLLADPITVTVGVVGVPPGSINQEIIAVPNGDKHDKLLELL 455
Query: 434 --------EENDGKRILVFVETKRNADFIAAML 508
+ N K+I+VFVE +R A +A+ L
Sbjct: 456 KTDIDNYKQNNVLKKIIVFVERRRTAQQVASAL 488
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 101 bits (243), Expect = 2e-20
Identities = 46/86 (53%), Positives = 65/86 (75%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
SS + + S+HGDR QR+RE+AL+NFK+GK IL+AT +A+RGLD+ +V V N+D
Sbjct: 504 SSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVYNFD 563
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVS 753
P++I+EYVHRIGRTGR G G +++
Sbjct: 564 FPRNIEEYVHRIGRTGRAGRTGVSIT 589
Score = 68.5 bits (160), Expect = 2e-10
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ YGG Q + + +G I++ATPGRL+D N V+ ++ ++VLDEAD+MLD
Sbjct: 344 LRSVCVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD 403
Query: 192 MGFMPSIEKMML 227
MGF P I K++L
Sbjct: 404 MGFEPQIMKILL 415
Score = 47.2 bits (107), Expect = 5e-04
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT+M SAT+P + LA +L + V VG + A + V+Q I T+ EK + ++
Sbjct: 420 DRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQT 479
Query: 428 LIEE-NDGKRILVFVETKRNADFIAAMLRNSNCS 526
++ + +++VFV K AD +++ L N S
Sbjct: 480 FLQSMSSTDKVIVFVSRKAVADHLSSDLILGNIS 513
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 101 bits (242), Expect = 2e-20
Identities = 44/105 (41%), Positives = 70/105 (66%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L K C +S+++E S+HGD+ Q++R+ ++ FK+ K +L AT VA+
Sbjct: 316 KVLIFVETKKDCEDLASYLSEHGFFCMSLHGDKTQQQRDYVMKEFKASKCKLLCATDVAS 375
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYDL 765
RGLD++++ +V+NYD P ID YVHRIGRTGR G++G++++ L
Sbjct: 376 RGLDVRDISLVINYDFPNQIDNYVHRIGRTGRAGDKGRSITMITL 420
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/67 (49%), Positives = 43/67 (64%)
Frame = +3
Query: 21 AVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGF 200
A YGG R Q +AR I+VATPGRL DF++ + +V ++VLDEADRMLDMGF
Sbjct: 173 ACIYGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDEADRMLDMGF 232
Query: 201 MPSIEKM 221
+ K+
Sbjct: 233 EQQVRKI 239
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/90 (33%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNN---YLFVAVGIVGGASTDVEQIFIEVTKYEKRNSL 421
+RQT+ FSAT+P+ +Q+LA +N L++ V + ++ Q I + + EK+ L
Sbjct: 246 DRQTVFFSATWPKTVQNLACDLCHNEPINLYIGSQEV-TINKNITQETICLYQNEKQEEL 304
Query: 422 KQLIEENDGK-RILVFVETKRNADFIAAML 508
++EE K ++L+FVETK++ + +A+ L
Sbjct: 305 LYILEELSNKDKVLIFVETKKDCEDLASYL 334
>UniRef50_Q6BLU9 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=2; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 580
Score = 101 bits (242), Expect = 2e-20
Identities = 44/76 (57%), Positives = 56/76 (73%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHG + Q RE A+ +F+ GK IL+AT VAARG+DI NV +VVNY + K DEY+HRIG
Sbjct: 467 IHGSKSQEARERAIDSFREGKDKILIATDVAARGIDIPNVSLVVNYQMTKKFDEYIHRIG 526
Query: 715 RTGRVGNRGKAVSFYD 762
RTGR GN+G + +F D
Sbjct: 527 RTGRAGNKGTSCTFID 542
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V GG ++ G HI+VATPGRL D +ER ++ + F +DEAD+M+D
Sbjct: 266 LNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMID 325
Query: 192 MGFMPSIEKMM 224
MGF S++ ++
Sbjct: 326 MGFEKSLQSIL 336
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 100 bits (240), Expect = 4e-20
Identities = 45/83 (54%), Positives = 63/83 (75%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+ ++ + ++HGD QR+RE+AL FKSG IL+AT VAARGLDIK+V +V+NY++P+
Sbjct: 260 LTKKGIRAQALHGDLTQRQREKALSAFKSGAVSILIATDVAARGLDIKDVGVVINYNIPE 319
Query: 685 SIDEYVHRIGRTGRVGNRGKAVS 753
+ Y+HRIGRTGR+G GKA S
Sbjct: 320 DPELYIHRIGRTGRIGKSGKAFS 342
Score = 63.3 bits (147), Expect = 7e-09
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 24 VAYGGTAVRHQGDNIA-RGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGF 200
V YGGT+V+ D + + IL+ TPGR+ D ++R ++ V ++VLDE D+MLDMGF
Sbjct: 101 VFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYLVLDEFDQMLDMGF 160
Query: 201 MPSIE 215
+ IE
Sbjct: 161 IEDIE 165
Score = 48.8 bits (111), Expect = 2e-04
Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVTK-YEKRNSLK 424
ER T MFSAT P I+ LA RFL +++ FV V V ++E+ I+++ EK + L
Sbjct: 174 ERTTYMFSATVPSRIELLAKRFLKSDFKFVKVQSV-ELKPNIEEKMIKLSSPGEKIHELM 232
Query: 425 QLIEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+I+ + +++L+FV+TK++A + +L ++ A+ +++ R+R + L
Sbjct: 233 HIIDTHPMEKMLIFVKTKKDAKDLFFLLTKKG---IRAQALHGDLTQRQREKAL 283
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 100 bits (240), Expect = 4e-20
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGD+ Q ER+ L FK+GK I+ AT VAARGLD+K+V V+NYD P S+++YVHRI
Sbjct: 343 SIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRI 402
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G G A +F+
Sbjct: 403 GRTGRAGASGTAYTFF 418
Score = 64.5 bits (150), Expect = 3e-09
Identities = 34/71 (47%), Positives = 43/71 (60%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S +K YGG Q ++ +G I++ATPGRL D +E N + V +VLDEADRM
Sbjct: 196 SRIKNTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMLESNHTNLRRVT-IVLDEADRM 254
Query: 186 LDMGFMPSIEK 218
LDMGF P I K
Sbjct: 255 LDMGFEPQIRK 265
>UniRef50_Q4UBV5 Cluster: DEAD-box family (RNA) helicase, putative;
n=2; Theileria|Rep: DEAD-box family (RNA) helicase,
putative - Theileria annulata
Length = 797
Score = 100 bits (240), Expect = 4e-20
Identities = 49/88 (55%), Positives = 61/88 (69%)
Frame = +1
Query: 490 LHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVN 669
L ++ + +IHGDR Q +RE+AL FK+G I+VAT VAARGLDI N+ V+N
Sbjct: 587 LIEGYLLSENFKAVNIHGDRSQEDREKALSLFKAGVRPIMVATDVAARGLDISNITHVIN 646
Query: 670 YDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
DLP +ID+YVHRIGRTGR GN G A S
Sbjct: 647 CDLPTNIDDYVHRIGRTGRAGNIGIATS 674
Score = 97.9 bits (233), Expect = 3e-19
Identities = 43/79 (54%), Positives = 57/79 (72%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ ++ V YGG+ VR Q + RGC I VATPGRL D VER ++ F ++++VLDEADR
Sbjct: 355 GTGIRTVVLYGGSEVRRQLIELERGCDICVATPGRLTDLVERRKIVFSCIKYLVLDEADR 414
Query: 183 MLDMGFMPSIEKMMLHPTM 239
MLDMGF P I+ ++ HPTM
Sbjct: 415 MLDMGFSPQIKSILSHPTM 433
Score = 79.4 bits (187), Expect = 1e-13
Identities = 40/91 (43%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQT+MFSATFP++IQ LA FLN+Y+++AVG VG + ++Q + + +K L +L+
Sbjct: 506 RQTVMFSATFPKEIQQLAREFLNDYIYLAVGRVGSTNEFIKQRLLYADQDQKIKYLIKLL 565
Query: 434 EEND--GKRILVFVETKRNADFIAAMLRNSN 520
++N G +L+FVETK+ AD I L + N
Sbjct: 566 KDNTNLGGLVLIFVETKKRADLIEGYLLSEN 596
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 100 bits (239), Expect = 5e-20
Identities = 45/85 (52%), Positives = 66/85 (77%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
H+ ++ + +++IHGD+ Q ER ++L+ FK+G+ +LVAT VAARGLDI ++ V+NYDLP
Sbjct: 286 HLEKEGVSSTAIHGDKTQIERTKSLEAFKAGEVTVLVATDVAARGLDIADLPCVINYDLP 345
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSF 756
+ ++YVHRIGRTGR G +G A SF
Sbjct: 346 TTPEDYVHRIGRTGRAGAKGTAYSF 370
Score = 77.0 bits (181), Expect = 6e-13
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ V YGG + Q + RG +++ATPGRL D V++ ++ G V+ +VLDEADRMLD
Sbjct: 125 LRSTVVYGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLD 184
Query: 192 MGFMPSIEKMM 224
MGF+P +++++
Sbjct: 185 MGFLPDLQRII 195
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ-IFIEVTKYEKRNSLKQL 430
RQ L+FSATF +IQ LA F+ + + V S +++Q IF ++ +KR ++ L
Sbjct: 202 RQNLLFSATFSPEIQKLAKSFMVSPTLIEVARRNATSENIKQVIFALDSEEDKRMAVCHL 261
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILRVG 595
I+ +++VF TK +A L S + K + G
Sbjct: 262 IQSKALSQVIVFSNTKLGTARLARHLEKEGVSSTAIHGDKTQIERTKSLEAFKAG 316
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 99 bits (238), Expect = 7e-20
Identities = 43/85 (50%), Positives = 65/85 (76%), Gaps = 2/85 (2%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
+Q+ + +HGD++Q ER+ AL +FKSG L+AT VA+RGLDI+N++IV+NY++P I
Sbjct: 420 DQRYRVACMHGDKVQAERDRALSDFKSGAVNYLIATDVASRGLDIRNIEIVINYEMPSDI 479
Query: 691 DEYVHRIGRTGRVGN--RGKAVSFY 759
+ Y+HRIGRTGR+G G+A+S +
Sbjct: 480 ENYIHRIGRTGRMGRSVEGEAISLF 504
Score = 68.1 bits (159), Expect = 3e-10
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ +K +GG Q + GC I VATPGRL DF++R S F++LDEADR
Sbjct: 252 GTAIKTVRCFGGVPQSSQMKDFQSGCDICVATPGRLIDFIKRGVTSLSRCTFLILDEADR 311
Query: 183 MLDMGFMPSIEKMM 224
ML+MGF ++ ++
Sbjct: 312 MLEMGFEVQVQDII 325
Score = 51.6 bits (118), Expect = 2e-05
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT+M++AT+P+ IQ A F+ + L + +G A+ V+QI IEV + R+S
Sbjct: 331 DRQTVMWTATWPQAIQQFALGFMFHPLQINIGNPDLHANESVKQI-IEVCQERDRDSKMN 389
Query: 428 LIEENDG--KRILVFVETKRNADFIAAMLRN 514
I + G K++L+FV+TKR+AD + LR+
Sbjct: 390 EIVKRIGSEKKVLIFVKTKRSADNLCYKLRD 420
>UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:
ENSANGP00000013118 - Anopheles gambiae str. PEST
Length = 512
Score = 99 bits (238), Expect = 7e-20
Identities = 48/97 (49%), Positives = 67/97 (69%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C KT SS + +IHG+R Q +RE+AL++ K+G IL+AT VA+RGLDI
Sbjct: 358 CGKKTRADDLSSEFILSNISCQAIHGNREQSDREQALEDIKNGTVKILIATDVASRGLDI 417
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+++ VVNYD P++I+EYVHR+GRTGR G G ++SF
Sbjct: 418 EDITHVVNYDFPRNIEEYVHRVGRTGRAGRTGISLSF 454
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K YGG R Q + + G IL+ATPGRL+D V+ V ++ +++LDEADRMLD
Sbjct: 208 IKAVCLYGGGDRRAQINVVRNGVEILIATPGRLNDLVQEGVVDVSTITYLILDEADRMLD 267
Query: 192 MGFMPSIEKMML 227
MGF P I K++L
Sbjct: 268 MGFEPQIRKVLL 279
Score = 42.7 bits (96), Expect = 0.011
Identities = 26/97 (26%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGAS----TDVEQIFIEVTKYEKRNS 418
+RQT+M SAT+P+ ++ LA ++++ + V +G + A+ T V ++ E K+++ N
Sbjct: 284 DRQTVMTSATWPDGVRRLAQSYMHDPIQVYIGTLDLAATHTVTQVIEVMDEEDKFQRINE 343
Query: 419 LKQLIEENDGKRILVFVETKRNADFIAA--MLRNSNC 523
+ ++ D ++++F K AD +++ +L N +C
Sbjct: 344 FVRDMQPTD--KVIIFCGKKTRADDLSSEFILSNISC 378
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 99 bits (238), Expect = 7e-20
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD+ Q ER L FKSGKH I++AT VA+RGLD+++V V+NYD P I++YVHRIG
Sbjct: 486 IHGDKKQEERTWVLNEFKSGKHPIMIATDVASRGLDVRDVKYVINYDFPGQIEDYVHRIG 545
Query: 715 RTGRVGNRGKAVSF 756
RTGR G +G + +F
Sbjct: 546 RTGRAGMKGSSYTF 559
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S LK +VAYGG R Q + RG IL+A PGRL DF+E + + V ++VLDEADRM
Sbjct: 310 SKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEADRM 369
Query: 186 LDMGFMPSIEKMM 224
LDMGF P I K++
Sbjct: 370 LDMGFEPQIRKIV 382
Score = 55.6 bits (128), Expect = 1e-06
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNN-YLFVAVGIVGGAST-DVEQIFIEVTKYEKRNSLK 424
+RQTLMFSAT+P+++ L+ L++ + V +G + + ++EQ + + EKR LK
Sbjct: 388 DRQTLMFSATWPKEVIALSRSLLSHEVVHVNIGSLDLTTCHNIEQNVFILEEREKRVKLK 447
Query: 425 QLIEE-NDGKRILVFVETKRNADFIAAMLR 511
+L+++ DG +IL+F ETK+ AD + LR
Sbjct: 448 ELLKKLMDGGKILIFSETKKGADTLTRELR 477
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 99 bits (238), Expect = 7e-20
Identities = 46/79 (58%), Positives = 62/79 (78%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
+++IHGDR Q++RE AL++FK ILVAT VA+RGLDI +V VV +DLP+ +D+Y H
Sbjct: 748 STTIHGDRRQQDREAALEDFKQKVTPILVATDVASRGLDIPDVAHVVQFDLPQEMDDYTH 807
Query: 706 RIGRTGRVGNRGKAVSFYD 762
RIGRTGR GN+G A +FY+
Sbjct: 808 RIGRTGRAGNKGIATAFYN 826
Score = 63.3 bits (147), Expect = 7e-09
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
ERQT MFSATFP+ I +LA R+L Y + VG VG + ++ Q V EK + L Q
Sbjct: 654 ERQTFMFSATFPQRILNLAKRYLRRKYYLLTVGRVGSTTKNITQTIEHVPDNEKMDRLLQ 713
Query: 428 LIEEND-GKRILVFVETKRNADFIAAMLRNSNCS 526
+I ++ +L+FVETK+ A+ + L S
Sbjct: 714 IIYGHEMSDMVLIFVETKKMAEDVNRRLHREGIS 747
Score = 60.1 bits (139), Expect = 7e-08
Identities = 30/67 (44%), Positives = 42/67 (62%)
Frame = +3
Query: 24 VAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFM 203
V YGGT + + ILVA PGRL D +SF +++F++LDEADRML+MGF
Sbjct: 581 VVYGGTRYPQRFEQ-----DILVACPGRLRDMFNEEYLSFSAIKFLILDEADRMLEMGFE 635
Query: 204 PSIEKMM 224
IE+++
Sbjct: 636 EQIEELV 642
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 99 bits (238), Expect = 7e-20
Identities = 41/76 (53%), Positives = 61/76 (80%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+S+HG + Q +R+EA++NFK+G I+VAT+VAARGLD+K + +V+NYD P +++YVHR
Sbjct: 684 ASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELKLVINYDAPNHMEDYVHR 743
Query: 709 IGRTGRVGNRGKAVSF 756
GRTGR GN+G ++F
Sbjct: 744 AGRTGRAGNKGTCITF 759
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVR---FVVLDEADR 182
++ + GG+++ + +G +++ TPGR+ D + N +VR ++V+DEADR
Sbjct: 505 IRASCCVGGSSISEDIAAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADR 564
Query: 183 MLDMGFMPSIEKMM 224
M DMGF P + K++
Sbjct: 565 MFDMGFEPQVMKII 578
Score = 36.7 bits (81), Expect = 0.73
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV----TKYEK-RNSL 421
Q ++FSATFP+ ++ LA R L L + VG + +++Q +EV TK+ + L
Sbjct: 586 QKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQ-RVEVRDGDTKFTRLLEIL 644
Query: 422 KQLIEEN---DGKRILVFVETKRNAD--FIAAMLRNSNCSHL 532
++ EE+ D R L+FV+ + +AD F + R C+ L
Sbjct: 645 GEMGEEHKDEDDFRTLIFVDRQESADDLFRELLQRGYVCASL 686
>UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like -
Pseudomonas putida W619
Length = 621
Score = 99.5 bits (237), Expect = 9e-20
Identities = 43/84 (51%), Positives = 62/84 (73%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
H+ + + +HG++ Q++R+ A++ FK G +LVAT VAARGLDI +D+V+N+D+P
Sbjct: 444 HLVAKDVKAFVLHGEKDQKDRKLAIERFKQGSSKVLVATDVAARGLDIDGLDLVINFDMP 503
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVS 753
+S DEYVHRIGRTGR G G A+S
Sbjct: 504 RSGDEYVHRIGRTGRAGGEGLAIS 527
Score = 54.0 bits (124), Expect = 5e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K + GG + Q + + +L+ TPGRL + + + V+ ++LDEADRMLD
Sbjct: 282 IKAGLVTGGEDFKEQAAMLRKVPDVLIGTPGRLLEQLNAGNLDLSHVQVMILDEADRMLD 341
Query: 192 MGFMPSIEKM 221
MGF +E++
Sbjct: 342 MGFAEDMERL 351
>UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain,
putative; n=4; Plasmodium (Vinckeia)|Rep: Helicase
conserved C-terminal domain, putative - Plasmodium
yoelii yoelii
Length = 212
Score = 99.5 bits (237), Expect = 9e-20
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD+ Q ER L +FK+GK IL+AT VA+RGLDIKNV V+NYD P I++YVHRIG
Sbjct: 62 IHGDKKQDERRWVLNDFKTGKSPILIATDVASRGLDIKNVKFVINYDFPNQIEDYVHRIG 121
Query: 715 RTGRVGNRGKAVSF 756
RTGR G G + +F
Sbjct: 122 RTGRAGAHGASFTF 135
Score = 43.2 bits (97), Expect = 0.008
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Frame = +2
Query: 383 FIEVTKYEKRNSLKQLIEE--NDGKRILVFVETKRNADFIAAMLR 511
+I V ++EK +LK L++ + RI+VFVETKR+ADFI LR
Sbjct: 9 YIYVHEHEKLGNLKSLLQRIFKENDRIIVFVETKRSADFITKALR 53
>UniRef50_Q4UA43 Cluster: DEAD-family helicase, putative; n=3;
Piroplasmida|Rep: DEAD-family helicase, putative -
Theileria annulata
Length = 757
Score = 99.5 bits (237), Expect = 9e-20
Identities = 43/87 (49%), Positives = 59/87 (67%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+ H+ + S+HG + Q RE+AL FKSG + ILVAT V RGLD++ + +V+NYD
Sbjct: 625 TKHITKIGYRAVSLHGGKTQESREDALNKFKSGAYDILVATDVVGRGLDVEGIKVVINYD 684
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+PK I Y HRIGRTGR G +G ++SF
Sbjct: 685 MPKDIQTYTHRIGRTGRAGLKGLSISF 711
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/65 (43%), Positives = 38/65 (58%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S VAV GG Q + +GC I++ TPGR+ D ++R +V+LDEADRM
Sbjct: 443 SCRSVAVV-GGRNAESQAFELRKGCEIIIGTPGRVKDCLDRAYTVLSQCNYVILDEADRM 501
Query: 186 LDMGF 200
+DMGF
Sbjct: 502 IDMGF 506
Score = 54.8 bits (126), Expect = 3e-06
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = +2
Query: 215 KNDVTSNHGGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV 394
+ ++++ G R T MFSAT P ++ L R+L F+++G VGG T + Q V
Sbjct: 532 EQELSTKAGHRRYRITHMFSATMPPAVEKLTKRYLRAPAFISIGDVGGGKTSITQQLDFV 591
Query: 395 TKYEKRNSLKQLIEENDGKRILVFVETKRNADFI 496
+ +K L++ +E + I++FV K+N D I
Sbjct: 592 QESKKTRHLEETLETLE-PPIIIFVNLKKNTDVI 624
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 99.5 bits (237), Expect = 9e-20
Identities = 43/78 (55%), Positives = 58/78 (74%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGD+ Q ER+ L FKSGK I+ AT VAARGLD+K++ V+N+D P ++++Y+HRI
Sbjct: 525 SIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRI 584
Query: 712 GRTGRVGNRGKAVSFYDL 765
GRTGR G G A +F+ L
Sbjct: 585 GRTGRAGASGTAFTFFTL 602
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG Q ++ RG I++ATPGRL D +E + V ++VLDEADRMLDMGF P
Sbjct: 359 YGGAPKGPQIRDLRRGVEIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADRMLDMGFEPQ 418
Query: 210 IEKMM 224
I K++
Sbjct: 419 IRKIV 423
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQTL +SAT+P +++ LA +FL N V +G A+ ++QI ++++EK L +
Sbjct: 429 DRQTLYWSATWPREVESLARQFLQNPYKVIIGSPDLKANHSIQQIIEVISEHEKYPRLSK 488
Query: 428 LIEE-NDGKRILVFVETKRNADFIAAMLR 511
L+ + DG RIL+F +TK++ D + LR
Sbjct: 489 LLSDLMDGSRILIFFQTKKDCDKVTRQLR 517
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/86 (50%), Positives = 62/86 (72%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
+++ Q +IHGD+ Q+ER+ L +F++G+H ILVAT VAARGLD+ +V V+NYD P
Sbjct: 423 NISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKFVINYDYP 482
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSFY 759
+ ++YVHRIGRTGR N G A + +
Sbjct: 483 SNSEDYVHRIGRTGRSNNTGTAYTLF 508
Score = 73.3 bits (172), Expect = 7e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
+GG Q ++ RG I++ATPGRL DF+ER S ++VLDEADRMLDMGF P
Sbjct: 265 FGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQ 324
Query: 210 IEKMM 224
I K+M
Sbjct: 325 IRKIM 329
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQ LM+SAT+P++++ LA FLNNY+ V +G + A+ ++ QI + EK L +
Sbjct: 335 DRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIK 394
Query: 428 LI----EENDGKRILVFVETKRNADFI 496
L+ EN+ K I +FVETK+ D I
Sbjct: 395 LLTDISAENETKTI-IFVETKKRVDEI 420
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 99.1 bits (236), Expect = 1e-19
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD+ QRERE L +F+SGK+ IL+AT VAARGLD+ +V V+N+D P + ++Y+HRIG
Sbjct: 364 IHGDKSQREREYTLNSFRSGKNPILIATDVAARGLDVDDVKFVINFDYPTTSEDYIHRIG 423
Query: 715 RTGRVGNRGKAVSFY 759
RTGR N G A +F+
Sbjct: 424 RTGRSNNTGTAYTFF 438
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K +GG A R QGD++ G I++ATPGRL DF+ + ++VLDEADRMLD
Sbjct: 189 IKNTCLFGGGAKRQQGDDLKYGVEIVIATPGRLIDFLSSEHTNLRRCSYLVLDEADRMLD 248
Query: 192 MGFMPSIEKMM 224
MGF P I ++
Sbjct: 249 MGFEPQIRAII 259
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+ QTLM+SAT+P+ + L +L +Y+ + VG + A+ ++ QI ++EK L
Sbjct: 265 DHQTLMWSATWPDAVSRLVKDYLKDYIQINVGSLKLAANHNILQIIDVCQEHEKEAKLSI 324
Query: 428 LIEENDGK---RILVFVETKRNADFI 496
L+ E + + ++F+ETK+ D I
Sbjct: 325 LLREIMAEKECKTIIFIETKKRVDDI 350
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 99.1 bits (236), Expect = 1e-19
Identities = 39/75 (52%), Positives = 59/75 (78%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH +R Q++R+ + +F++GK +L+ TA+ ARG+D K V++V+NYD P S EY+HRIG
Sbjct: 442 IHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIG 501
Query: 715 RTGRVGNRGKAVSFY 759
RTGR GN+GKA++F+
Sbjct: 502 RTGRAGNKGKAITFF 516
Score = 39.9 bits (89), Expect = 0.079
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +2
Query: 248 HERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV-TKYEKRNSLK 424
H+ + MFSATF D++ L+N + V++G A VEQ + V ++ K +++
Sbjct: 345 HKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAVR 404
Query: 425 QLIEENDGKRILVFVETKRNA 487
+L+++ +LVFV++ A
Sbjct: 405 ELVKKGFNPPVLVFVQSIERA 425
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 98.7 bits (235), Expect = 2e-19
Identities = 45/86 (52%), Positives = 66/86 (76%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
SS ++ Q + S+HG+R Q +RE+AL +F+SG+ IL+AT +AARGLD+++V V NYD
Sbjct: 567 SSDLSIQGVPVQSLHGNREQFDREQALDDFRSGRVKILIATDLAARGLDVRDVTHVYNYD 626
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVS 753
PK+++EYVHR+GRTGR G G +V+
Sbjct: 627 SPKNLEEYVHRVGRTGRAGKTGVSVT 652
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/72 (44%), Positives = 46/72 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK YGG + Q +I +G I++ATPGRL+D V+ S+ ++VLDEAD+MLD
Sbjct: 407 LKSVCVYGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLD 466
Query: 192 MGFMPSIEKMML 227
+GF I K++L
Sbjct: 467 LGFEGQITKILL 478
Score = 42.7 bits (96), Expect = 0.011
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT+M SAT+P I+ LA +L + V VG + A V+Q I T+ EKR +++
Sbjct: 483 DRQTVMTSATWPHTIRQLARSYLKEPMIVYVGTLDLVAVHTVKQDIIVTTEEEKRTLIQE 542
Query: 428 LIEE-NDGKRILVFVETKRNADFIAAML 508
+ + ++FV K AD +++ L
Sbjct: 543 FLRNLAPEDKAIIFVSRKLVADDLSSDL 570
>UniRef50_Q7R3F3 Cluster: GLP_158_79919_77949; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_158_79919_77949 - Giardia lamblia
ATCC 50803
Length = 656
Score = 98.3 bits (234), Expect = 2e-19
Identities = 45/74 (60%), Positives = 56/74 (75%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD Q+ERE L+ FK+G+ IL+ T VA RGLDI NV +V+NYDLP ++D+Y HRIG
Sbjct: 499 IHGDMTQKERENNLKYFKAGRTNILIGTDVAQRGLDIPNVRLVLNYDLPGNVDDYTHRIG 558
Query: 715 RTGRVGNRGKAVSF 756
RTGR G G AV+F
Sbjct: 559 RTGRAGRPGLAVTF 572
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/74 (52%), Positives = 47/74 (63%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ + VAYGG Q D + GC ILVATPGRL DF+++ V VRFVV DE DR
Sbjct: 246 GTSILTRVAYGGDPSGPQRDALQMGCDILVATPGRLLDFIKQGVVETTYVRFVVFDECDR 305
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF P I ++
Sbjct: 306 MLDMGFEPQIRDIL 319
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFL--NNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLK 424
ERQTL+FSATFP++I++LA FL + + + VG +G ++ ++ Q V E+ N
Sbjct: 342 ERQTLLFSATFPKEIKNLAMEFLRQDRLVSITVGQIGSSNPNLAQ---RVVLVERSNDKL 398
Query: 425 QLIEE 439
+L+ E
Sbjct: 399 RLLTE 403
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 98.3 bits (234), Expect = 2e-19
Identities = 49/102 (48%), Positives = 67/102 (65%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L + K C S + ++ +IHGD+ Q++R+ + FKSG+ IL+AT VA+
Sbjct: 349 KVLIFAQTKKGCESMSRILNKEGFKCLAIHGDKAQKDRDYVMNKFKSGECRILIATDVAS 408
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
RGLD+K+V V NYD PK +++YVHRIGRTGR G G AVSF
Sbjct: 409 RGLDVKDVSHVFNYDFPKVMEDYVHRIGRTGRAGAYGCAVSF 450
Score = 67.3 bits (157), Expect = 5e-10
Identities = 34/73 (46%), Positives = 45/73 (61%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S LK A YGG Q + +G +++ATPGRL DF+E + V ++VLDEADRM
Sbjct: 201 SKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEADRM 260
Query: 186 LDMGFMPSIEKMM 224
LDMGF I K++
Sbjct: 261 LDMGFEIQIRKIL 273
Score = 47.6 bits (108), Expect = 4e-04
Identities = 30/89 (33%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNY-LFVAVGIVGGASTD-VEQIFIEVTKYEKRNSL- 421
+RQTLMFSAT+P+++Q+LA + N ++V +G A + ++QI + +K N L
Sbjct: 279 DRQTLMFSATWPKNVQNLAQDYCKNTPVYVQIGKHELAINERIKQIVYVTDQSKKINQLI 338
Query: 422 KQLIEENDGKRILVFVETKRNADFIAAML 508
KQL ++L+F +TK+ + ++ +L
Sbjct: 339 KQLDCLTQKDKVLIFAQTKKGCESMSRIL 367
>UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9;
Firmicutes|Rep: ATP-dependent RNA helicase dbpA -
Bacillus subtilis
Length = 479
Score = 98.3 bits (234), Expect = 2e-19
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
CR K + + + IHG +Q +R + + FK G++ LVAT VAARG+DI
Sbjct: 247 CRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDI 306
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+N+ +V+NYDLP + YVHR GRTGR GN+GKA+SF
Sbjct: 307 ENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISF 343
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K +G ++ Q + + HI+V TPGR+ D +E+ + + ++V+DEAD ML+
Sbjct: 99 IKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLN 158
Query: 192 MGFMPSIEKMMLHPTMVETT 251
MGF+ +E ++ H TT
Sbjct: 159 MGFIEQVEAIIKHLPTERTT 178
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ER T++FSAT P+DI+ L+ +++ N + V G + ++E I+V + K + LK +
Sbjct: 175 ERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDV 234
Query: 431 IEENDGKRILVFVETKRNAD 490
+ + ++F TK + +
Sbjct: 235 LMTENPDSCIIFCRTKEHVN 254
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 97.9 bits (233), Expect = 3e-19
Identities = 47/90 (52%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
Frame = +1
Query: 496 SSHVAEQ----QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
+SH+A+ ++ +IHGDR Q++R +AL FK G ILVAT VAARG+DI+ + V
Sbjct: 264 ASHLAQMLSRHEISAVAIHGDRNQQQRTQALAEFKHGDVQILVATDVAARGIDIEKLSHV 323
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+NY+LP + ++YVHRIGRTGR G++GKA+S
Sbjct: 324 INYELPGNPEDYVHRIGRTGRAGSKGKAIS 353
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ AV +GG + Q + G ILVATPGRL D VE+ V+F +VLDEADRMLD
Sbjct: 110 LRTAVVFGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLD 169
Query: 192 MGFMPSIEKMM 224
MGF+P I+++M
Sbjct: 170 MGFLPDIKRVM 180
Score = 49.6 bits (113), Expect = 1e-04
Identities = 29/92 (31%), Positives = 45/92 (48%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ+LMFSATF +I+ LA L + + + + + + V K L L
Sbjct: 186 QRQSLMFSATFSGEIRKLADSLLKQPVRIEAAVQNTVNESISHVIHWVKPDSKFALLLHL 245
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCS 526
I + + K+ L+FV+TK A +A ML S
Sbjct: 246 IRQQNLKQALIFVKTKHGASHLAQMLSRHEIS 277
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 97.9 bits (233), Expect = 3e-19
Identities = 43/77 (55%), Positives = 59/77 (76%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGD+ Q ER+ LQ+F+ GK ILVAT VAARGLD+++V V+N+D P S ++Y+HR
Sbjct: 506 TSIHGDKSQSERDYVLQDFRHGKSTILVATDVAARGLDVEDVKYVINFDYPNSSEDYIHR 565
Query: 709 IGRTGRVGNRGKAVSFY 759
IGRTGR + G A +F+
Sbjct: 566 IGRTGRCSSYGTAYTFF 582
Score = 68.1 bits (159), Expect = 3e-10
Identities = 31/72 (43%), Positives = 46/72 (63%)
Frame = +3
Query: 9 VLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRML 188
+++ +GG Q ++ RG +++ATPGRL DF+ER + ++VLDEADRML
Sbjct: 332 LIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADRML 391
Query: 189 DMGFMPSIEKMM 224
DMGF P I K++
Sbjct: 392 DMGFEPQIRKII 403
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQ LM+SAT+P+++Q LA FL++Y+ + +G + A+ ++ QI + EK L
Sbjct: 409 DRQVLMWSATWPKEVQALAEDFLHDYIQINIGSLNLSANHNIHQIVDVCEEGEKEGKLLS 468
Query: 428 LIEE---NDGKRILVFVETKRNAD 490
L++E + +I++FVETK+ +
Sbjct: 469 LLKEISSDVNSKIIIFVETKKKVE 492
>UniRef50_A0BDT5 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1238
Score = 97.9 bits (233), Expect = 3e-19
Identities = 45/102 (44%), Positives = 68/102 (66%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L K C S ++A++ T ++HGD+ Q +R+E ++ F+SG +L AT +A+
Sbjct: 348 KVLIFSEQKQRCEQLSINMADKGYYTIALHGDKTQPQRDEIMKAFRSGYTRLLCATDLAS 407
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
RGLD+ ++ +V+NYD PK D+Y+HRIGRTGR +GKA SF
Sbjct: 408 RGLDVTDITVVINYDFPKYFDDYIHRIGRTGRGEKKGKAFSF 449
Score = 60.9 bits (141), Expect = 4e-08
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVR-HQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRML 188
LK YGG R +Q N+ R +ILVATPGRL DF+ + +V ++V+DEADR+L
Sbjct: 201 LKTLCIYGGINNRKNQFYNLGRFPNILVATPGRLLDFLREGATTLANVSYLVIDEADRLL 260
Query: 189 DMGFMPSIEKMM 224
++GF +I +++
Sbjct: 261 ELGFEDTIREIV 272
>UniRef50_UPI00004992E6 Cluster: DEAD/DEAH box helicase; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 578
Score = 97.5 bits (232), Expect = 4e-19
Identities = 41/75 (54%), Positives = 58/75 (77%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGDR Q +R+ +L+ FK +LVAT VA+RGLDI ++++V+NYD+P I+ YVHR+
Sbjct: 417 SIHGDRSQADRDFSLKRFKENVIQLLVATDVASRGLDIPDIEVVINYDMPNEIESYVHRV 476
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G +G A++F
Sbjct: 477 GRTGRAGKKGTAITF 491
Score = 75.4 bits (177), Expect = 2e-12
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTLMFSATFP+ IQ LA FL++Y+F+ VG G ++QI + V + K+ ++ +
Sbjct: 321 KRQTLMFSATFPKQIQRLAADFLDDYVFITVGRAGSTVESIQQIILWVEEEIKQEAILDV 380
Query: 431 IEE--NDGKRILVFVETKRNADFI 496
+ E G++ ++FVETKR AD +
Sbjct: 381 LGEFAGKGQKTVIFVETKRGADIL 404
Score = 74.5 bits (175), Expect = 3e-12
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ YGG+ Q + +GC ILVATPGRL F E+ VS SVR+++ DEADRMLD
Sbjct: 241 IRSVCVYGGSDSYTQIQEMGKGCDILVATPGRLLYFTEKKIVSLSSVRYLIFDEADRMLD 300
Query: 192 MGFMPSIEKM 221
MGF P I ++
Sbjct: 301 MGFEPQIREI 310
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 97.1 bits (231), Expect = 5e-19
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGD+ Q ERE L NF+ G+ ILVAT VAARGLDI V V+ YD P +++YVHRI
Sbjct: 382 SIHGDKDQYEREMVLDNFRRGRGNILVATDVAARGLDIPGVAAVIVYDFPLQVEDYVHRI 441
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G GKA +F+
Sbjct: 442 GRTGRAGKDGKAFTFF 457
Score = 65.7 bits (153), Expect = 1e-09
Identities = 40/82 (48%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Frame = +3
Query: 21 AVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVE-----RNRVSFGSVRFVVLDEADRM 185
AV YGG A Q + G ++VATPGRL+DF+E VS +VVLDEADRM
Sbjct: 204 AVLYGGAAKGDQLRALRSGADVVVATPGRLNDFLEPPPGFTAPVSAVKAAYVVLDEADRM 263
Query: 186 LDMGFMPSIEKMM-LHPTMVET 248
LDMGF P I+K+ L P+ +T
Sbjct: 264 LDMGFEPQIKKIFKLCPSARQT 285
Score = 44.8 bits (101), Expect = 0.003
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG---ASTDVEQIFIEVTKYEKRNSLK 424
RQT+MF+AT+P+ +Q +A F + + +G G A+ + Q V + EK +
Sbjct: 283 RQTVMFTATWPKGVQKIADAFTTKPIHIQIGSGGDKLTANKSITQTVEVVEEEEKFDRCV 342
Query: 425 QLIEENDGKR--ILVFVETKRNADFIAAMLR 511
++++ GK ++F TKR DF+ L+
Sbjct: 343 AILKKELGKNETCIMFAGTKRRCDFLDRRLK 373
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 97.1 bits (231), Expect = 5e-19
Identities = 47/99 (47%), Positives = 64/99 (64%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C+ K SS + E+ +HGD Q +RE+ L FK K +LVAT VAARG+DI
Sbjct: 248 CKTKADVDEVSSRLNEKGYAAEGLHGDMTQAQREKTLDKFKGRKINVLVATDVAARGIDI 307
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
++ VVNYD+P++ + YVHRIGRTGR G +G AV+F +
Sbjct: 308 NDLTHVVNYDIPQNPESYVHRIGRTGRAGKQGYAVTFVE 346
Score = 67.3 bits (157), Expect = 5e-10
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V YGG ++ Q + RG I+V TPGR+ D + R + +V +VVLDEAD ML+
Sbjct: 100 LNVFPVYGGQSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLN 159
Query: 192 MGFMPSIEKMM 224
MGF+ +E+++
Sbjct: 160 MGFIDDVEEIL 170
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/86 (29%), Positives = 45/86 (52%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
E++ L+FSAT P+ I LA ++ Y + V +T +Q F E+ +K L ++
Sbjct: 176 EKRMLLFSATLPDSIMKLAKNYMREYDIIKVKRQQLTTTLTDQSFYEIHSRDKFELLSRI 235
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
I+ L+F +TK + D +++ L
Sbjct: 236 IDLEKEFYGLIFCKTKADVDEVSSRL 261
>UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Yarrowia lipolytica (Candida lipolytica)
Length = 974
Score = 97.1 bits (231), Expect = 5e-19
Identities = 40/75 (53%), Positives = 60/75 (80%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHG + Q +R++A+ +FKSG +L+AT+VAARGLD+K + +VVN+D P +++YVHR+
Sbjct: 693 SIHGGKEQADRDQAISDFKSGLVSVLIATSVAARGLDVKGLGLVVNWDSPNHMEDYVHRV 752
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G +G A++F
Sbjct: 753 GRTGRAGQKGTALTF 767
Score = 67.3 bits (157), Expect = 5e-10
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR---VSFGSVRFVVLDEADR 182
L AYGG+ ++ Q + +G HI+V TPGR+ D + N+ +S V F+V+DEADR
Sbjct: 488 LTAVCAYGGSPIKDQIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADR 547
Query: 183 MLDMGFMPSIEKM 221
M DMGF P + K+
Sbjct: 548 MFDMGFEPQVLKL 560
Score = 38.3 bits (85), Expect = 0.24
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVG----IVGGASTDVEQI--FIEVTKYEKR 412
+RQT++FSATFP+ ++ LA R L+ ++G IVG S +I F+EV + EK
Sbjct: 567 DRQTVLFSATFPKKMEQLARRVLSKRSSDSLGPIEIIVGARSVVASEITQFVEVFQNEK- 625
Query: 413 NSLKQLIE 436
+ +L+E
Sbjct: 626 SKFPRLLE 633
>UniRef50_P23394 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=3; Saccharomycetaceae|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 588
Score = 97.1 bits (231), Expect = 5e-19
Identities = 43/82 (52%), Positives = 59/82 (71%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
E + + +HG + Q +RE +LQ F++ K I++AT VAARGLDI NV +VVN+ + K +
Sbjct: 459 ETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKM 518
Query: 691 DEYVHRIGRTGRVGNRGKAVSF 756
D+Y+HRIGRTGR N G AVSF
Sbjct: 519 DDYIHRIGRTGRAANEGTAVSF 540
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
KV GG ++ +++ GC ILVATPGRL D +E + + V +VLDEAD+M+D+
Sbjct: 290 KVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDL 349
Query: 195 GFMPSIEKMM 224
GF + ++
Sbjct: 350 GFEDQVTNIL 359
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/117 (24%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQL 430
RQTLMF+AT I+ +A ++ ++ +G+ G+ ++Q+ E K LK +
Sbjct: 372 RQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPI 431
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILRVGNT 601
+ + D I++F+ K+ AD++A + ++++ T + + S +R L++ T
Sbjct: 432 VAKYD-PPIIIFINYKQTADWLAEKFQKE--TNMKVTILHGSKSQEQREHSLQLFRT 485
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 96.7 bits (230), Expect = 6e-19
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD QRER+ + F++G H ILVAT VAARGLDI N+++V+N+DLP S + YVHRIG
Sbjct: 314 LHGDMEQRERDRVMAMFRNGSHRILVATDVAARGLDIDNLELVINFDLPLSPEIYVHRIG 373
Query: 715 RTGRVGNRGKAVS 753
RTGR G G AV+
Sbjct: 374 RTGRAGKTGVAVT 386
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/71 (53%), Positives = 47/71 (66%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LKV GG + R Q D + G I+V TPGRL DFV RNR+ +V+ VVLDEAD+MLD
Sbjct: 145 LKVLAMTGGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLD 204
Query: 192 MGFMPSIEKMM 224
MGF I+ +M
Sbjct: 205 MGFADEIKTVM 215
Score = 47.2 bits (107), Expect = 5e-04
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQT++FSATFPE I+HL+ ++ + V I +EQ+ + +K N L +++
Sbjct: 222 RQTVLFSATFPESIEHLSRKYQRHAQQVI--IEDEEQNLIEQLVYDSEDNDKTNVLMRIL 279
Query: 434 EENDGKRILVFVETKRNADFIAAMLRN----SNCSH 529
+++ ++F TK IA L + S C H
Sbjct: 280 QQHPSDSTIIFCNTKNAVAEIAERLNDLGAASGCLH 315
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 96.7 bits (230), Expect = 6e-19
Identities = 43/87 (49%), Positives = 60/87 (68%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
S +AE + ++HGD Q +R ALQ + G+ +LVAT VAARG+D+ ++ V+N+D
Sbjct: 262 SDLLAESGFASDALHGDMQQGQRNRALQRLREGRTRVLVATDVAARGIDVASISHVINFD 321
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
LP+ ++YVHRIGRTGR G G AVSF
Sbjct: 322 LPRQAEDYVHRIGRTGRAGRTGIAVSF 348
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/67 (43%), Positives = 42/67 (62%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
+ A GG Q +++ ++VATPGRL D +ER ++ F + +VLDEADRMLDM
Sbjct: 104 RTACLVGGAPYGLQLKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDM 163
Query: 195 GFMPSIE 215
GF+ I+
Sbjct: 164 GFVDDIK 170
Score = 39.1 bits (87), Expect = 0.14
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNS-LKQ 427
ERQTL+FSAT + +LA + + + V +EQ + + +N L
Sbjct: 179 ERQTLLFSATLDGVVGNLARELTRDAQRIEIEAVPHKEAKIEQRLLFADNMDHKNRLLDA 238
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLRNS 517
L+ + + + +VF TKR+ + I+ +L S
Sbjct: 239 LLRDVEMVQAIVFASTKRSTEEISDLLAES 268
>UniRef50_Q16KK0 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 591
Score = 96.7 bits (230), Expect = 6e-19
Identities = 41/75 (54%), Positives = 56/75 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH DR Q+ER+ +++F+ GK IL+ T + +RG+D K V++VVNYD P S YVHRIG
Sbjct: 417 IHADRSQKERDNVVRSFREGKIWILICTELMSRGIDFKGVNLVVNYDFPPSTISYVHRIG 476
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G RGKAV+++
Sbjct: 477 RTGRAGRRGKAVTYF 491
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 96.3 bits (229), Expect = 9e-19
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++++ ++ L ++HGD Q +R+ + NF+ GK IL+AT VAARGLDI ++ +V+NYD
Sbjct: 259 TAYLQDKGFLADAVHGDLKQNQRQYVMNNFRKGKIKILIATDVAARGLDISDIKMVINYD 318
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVS 753
LP + YVHRIGRTGR G +G A S
Sbjct: 319 LPHEDEVYVHRIGRTGRAGKKGLAYS 344
Score = 63.3 bits (147), Expect = 7e-09
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+++AV YGG + Q + H+++ATPGR D +ER ++ +++ + LDEAD ML
Sbjct: 101 IRIAVVYGGESYTKQFRALEAKPHLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLK 160
Query: 192 MGFMPSIEKMM 224
MGF ++E ++
Sbjct: 161 MGFQEALETIL 171
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/88 (29%), Positives = 48/88 (54%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQT++FSAT P I+ +A ++ + + V + A +EQ + V + +K L +L
Sbjct: 177 ERQTVLFSATLPPFIKKIASKYQKDTKILQVPVKNIAVNAIEQNYFLVKEVDKAKLLVRL 236
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRN 514
++ ++F TK++ D I A L++
Sbjct: 237 LDLKKDYSAILFANTKKDVDEITAYLQD 264
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 96.3 bits (229), Expect = 9e-19
Identities = 42/81 (51%), Positives = 59/81 (72%)
Frame = +1
Query: 514 QQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSID 693
Q + +IHG++ Q +R+ AL +FK GK IL+AT +AARG+DI ++IV+N+DLP +
Sbjct: 369 QNIGADAIHGNKSQGQRQRALDDFKKGKTYILIATDIAARGIDIPGIEIVINFDLPNVPE 428
Query: 694 EYVHRIGRTGRVGNRGKAVSF 756
YVHRIGRT R G GKA++F
Sbjct: 429 SYVHRIGRTARAGADGKAIAF 449
Score = 72.1 bits (169), Expect = 2e-11
Identities = 30/66 (45%), Positives = 49/66 (74%)
Frame = +3
Query: 27 AYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMP 206
A GG +R Q ++++G ILVATPGRL D V++ + +F+VLDEAD+MLD+GF+P
Sbjct: 210 AIGGAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLP 269
Query: 207 SIEKMM 224
++++++
Sbjct: 270 AVKRII 275
Score = 56.8 bits (131), Expect = 6e-07
Identities = 36/112 (32%), Positives = 59/112 (52%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSAT ++I+ L +L + + V+V +EQ + ++K K +L+++
Sbjct: 281 DRQTLLFSATMSKEIKKLTETYLTDPVQVSVTPENSTVDKIEQSLMHLSKQNKGLALQRI 340
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
I N KR++VF TK +D + L N + AI N S +R R L
Sbjct: 341 ISANPKKRVIVFSRTKHGSDKLVKWLGTQN---IGADAIHGNKSQGQRQRAL 389
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 96.3 bits (229), Expect = 9e-19
Identities = 43/86 (50%), Positives = 61/86 (70%)
Frame = +1
Query: 499 SHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDL 678
S + ++ ++ + H R Q RE+ L +FK+GK LVAT VA+RG+DI + V+NYDL
Sbjct: 261 SQLEKRGIVAEAFHSGRSQAVREQLLIDFKAGKVSFLVATGVASRGIDIDALARVINYDL 320
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSF 756
P D+Y+HRIGRTGR GN+G+A+SF
Sbjct: 321 PDEADDYIHRIGRTGRAGNQGEAISF 346
Score = 62.9 bits (146), Expect = 1e-08
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L YGG Q + G +LVATPGRL D + + F V +VLDEADRMLD
Sbjct: 102 LTAMAMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLD 161
Query: 192 MGFMPSIEKMM 224
MGF+ I ++
Sbjct: 162 MGFIEDINSII 172
Score = 50.4 bits (115), Expect = 6e-05
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ L+FSAT + ++ LA + + + + + AST ++Q V K +K L L
Sbjct: 178 QRQNLLFSATLSKQVKALAKSAIPDAIEIEISRKSAASTHIDQWLTTVDKDKKSALLSHL 237
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
I+E + + L+F++TK A + + L
Sbjct: 238 IQEQNWSQALIFIQTKHGAAKLVSQL 263
>UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 730
Score = 96.3 bits (229), Expect = 9e-19
Identities = 43/74 (58%), Positives = 56/74 (75%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG + Q +RE ALQ K G ILVAT VA RG+D+K+V +V+NYD+ KSI++Y HRIG
Sbjct: 603 LHGGKGQDQREYALQALKEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIG 662
Query: 715 RTGRVGNRGKAVSF 756
RTGR G GKA++F
Sbjct: 663 RTGRAGKHGKAITF 676
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K GG + QG + G +++ATPGRL D +E + +V+LDEADRMLD
Sbjct: 407 IKTVSVIGGASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLD 466
Query: 192 MGFMPSIEKMM 224
MGF P ++K++
Sbjct: 467 MGFEPDVQKVL 477
Score = 54.4 bits (125), Expect = 3e-06
Identities = 28/82 (34%), Positives = 45/82 (54%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQT+MF+AT I+ LA ++L V +G G + VEQ+ V + KR L +++
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAGKPTERVEQVVYMVPEDRKRKKLVEVL 568
Query: 434 EENDGKRILVFVETKRNADFIA 499
E I++FV K+ AD ++
Sbjct: 569 ESQFQPPIIIFVNQKKGADMLS 590
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 95.9 bits (228), Expect = 1e-18
Identities = 41/80 (51%), Positives = 62/80 (77%)
Frame = +1
Query: 514 QQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSID 693
+++ S+HG+R Q +RE AL++FK+GK IL+AT +A+RGLD+ +V V NYD P++I+
Sbjct: 459 RRISVESLHGNREQSDRERALKSFKTGKVRILIATDLASRGLDVHDVTHVYNYDFPRNIE 518
Query: 694 EYVHRIGRTGRVGNRGKAVS 753
EYVHR+GRTGR G G +++
Sbjct: 519 EYVHRVGRTGRAGRTGVSIT 538
Score = 72.1 bits (169), Expect = 2e-11
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK YGG Q ++++G I++ATPGRLHD N V S+ ++VLDEAD+MLD
Sbjct: 343 LKSVCIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLD 402
Query: 192 MGFMPSIEKMML 227
MGF P I K++L
Sbjct: 403 MGFEPQIMKILL 414
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 95.9 bits (228), Expect = 1e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
++ +L ++HGD Q +RE + F++G +LVAT VAARGLD+ +VD V+N+DLP
Sbjct: 266 QRGILADALHGDLNQTQRERVMSRFRAGGISVLVATDVAARGLDVDDVDTVINFDLPNDP 325
Query: 691 DEYVHRIGRTGRVGNRGKAVSF 756
+ YVHRIGRTGR G G+A SF
Sbjct: 326 ETYVHRIGRTGRAGRTGRAFSF 347
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+++ YGG + Q + RG ++V TPGR+ D + R + G VR VLDEAD MLD
Sbjct: 103 VRILSVYGGQPIEPQASALRRGAQVVVGTPGRILDHINRGTLQLGVVRMTVLDEADEMLD 162
Query: 192 MGFMPSIEKMM 224
MGF IE+++
Sbjct: 163 MGFREDIERIL 173
Score = 41.5 bits (93), Expect = 0.026
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
Q+ FSAT P+ I LA RFL + V + EQ + EV + + +++ ++ +
Sbjct: 181 QSAFFSATMPDGILELARRFLREPELLRVTRRQLTVANTEQAWFEVRPFRRVDAVCRIFD 240
Query: 437 ENDGKRILVFVETKRNADFIAAMLR 511
++ +VF TK+ D +AA L+
Sbjct: 241 AYIPRKAIVFRATKQGVDELAAALQ 265
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 95.9 bits (228), Expect = 1e-18
Identities = 41/73 (56%), Positives = 58/73 (79%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD QRER + +++FK+GK +LVAT VAARGLDI +V V+N+D+P++ + Y+HRIG
Sbjct: 269 LHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIG 328
Query: 715 RTGRVGNRGKAVS 753
RTGR G GKA++
Sbjct: 329 RTGRAGREGKAIT 341
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 GSVLKV-AVA-YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEA 176
G LKV A+A YGG A+ Q + +G ++V TPGR+ D + R ++ V+LDEA
Sbjct: 93 GKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEA 152
Query: 177 DRMLDMGFMPSIEKMM 224
D MLDMGF+ IE ++
Sbjct: 153 DEMLDMGFIDDIEAIL 168
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 HERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGAST--DVEQIFIEVTKYEKRNSL 421
+ +QTL+FSAT P I+ + +FL Y V +VG T + Q++ E+ + EK L
Sbjct: 173 NRQQTLLFSATLPAPIKTIIKKFLGGY--KTVKLVGREKTVPAIRQVYYELPETEKIEGL 230
Query: 422 KQLIEENDGKRILVFVETKRNADFIAAML 508
++ + +VF TK+ D + L
Sbjct: 231 VSILNSELPIQAIVFCRTKKRVDEVVEQL 259
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 95.9 bits (228), Expect = 1e-18
Identities = 48/99 (48%), Positives = 61/99 (61%)
Frame = +1
Query: 457 LGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARG 636
+ C K S + + + +IHGD QR RE+ LQ F+ GK +LVAT VAARG
Sbjct: 256 IAFCNTKNMTDRLSGLLQMRGITAQAIHGDIQQRIREKTLQAFREGKMRVLVATDVAARG 315
Query: 637 LDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
LDI +VD+V NYD+P I+ Y+HRIGRTGR G A S
Sbjct: 316 LDIDDVDVVFNYDVPDEIEYYIHRIGRTGRAKRHGVAYS 354
Score = 63.7 bits (148), Expect = 6e-09
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG + Q + + I+VATPGRL D ++R V V VVLDEADRMLDMGF+
Sbjct: 116 YGGAPIEKQITTLKKHPQIVVATPGRLMDHMKRRTVKLDKVETVVLDEADRMLDMGFIHD 175
Query: 210 IEKMM 224
+ +++
Sbjct: 176 VTRIL 180
>UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=2;
Polaribacter|Rep: Putative ATP-dependent RNA helicase -
Polaribacter dokdonensis MED152
Length = 411
Score = 95.9 bits (228), Expect = 1e-18
Identities = 44/76 (57%), Positives = 57/76 (75%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SIHGD+ Q R +A+++FKS K IL+AT VAARG+DI NVD ++N+D+P + YVHR
Sbjct: 273 ASIHGDKTQGVRNKAIEDFKSKKASILIATDVAARGIDITNVDAIINFDIPNVPEIYVHR 332
Query: 709 IGRTGRVGNRGKAVSF 756
IGRTGR G G A SF
Sbjct: 333 IGRTGRAGKSGIAFSF 348
Score = 64.1 bits (149), Expect = 4e-09
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S L+ +GG ++ Q + +A+G ILVATPGRL D + + + VLDEAD M
Sbjct: 102 SNLRSTAVFGGVSLEPQKEILAKGVDILVATPGRLIDLQMQGNIDLSQLEIFVLDEADLM 161
Query: 186 LDMGFMPSIEKM 221
LDMGF+ I+K+
Sbjct: 162 LDMGFINDIKKI 173
Score = 39.1 bits (87), Expect = 0.14
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
++QTL+FSAT PE I L+ + N V + + ++ Q+ + K K + L
Sbjct: 180 KKQTLLFSATIPEKIDELSKSIVKNATKVDINPEETTAKNIGQLLYYLPKKNKTDLCLHL 239
Query: 431 IEENDGKRILVFVETKRNAD 490
+ +I++F TK D
Sbjct: 240 LRNTINGKIIIFRRTKFAVD 259
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 95.9 bits (228), Expect = 1e-18
Identities = 43/101 (42%), Positives = 63/101 (62%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L K C S + +Q S+HGD+ Q +R+ ++ FK ++ AT +A+
Sbjct: 318 KVLIFAETKKRCEDLSQSLTKQGYFCISLHGDKSQDQRDAIMKQFKDSNTRLICATDIAS 377
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
RGLD+K++ +VVNYD PKS D+Y+HRIGRTGR G G++ S
Sbjct: 378 RGLDVKDITVVVNYDFPKSFDDYIHRIGRTGRAGAHGRSFS 418
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 12 LKVAVAYGGTA-VRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRML 188
LK+ YGG + Q + I +G H++VATPGRL + ++ V+ + ++LDEADRML
Sbjct: 177 LKIVCIYGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRML 236
Query: 189 DMGFMPSIEKMM 224
DMGF P + ++
Sbjct: 237 DMGFEPQVRDIV 248
Score = 39.5 bits (88), Expect = 0.10
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT++ SAT+P ++Q L+ F + + V + G + Q I + EK + L +
Sbjct: 254 DRQTILLSATWPNEVQQLSKEFCYDPILVKI----GKGAPITQKIICTGQKEKLHVLMNV 309
Query: 431 IEE-NDGKRILVFVETKRNADFIAAML 508
+++ ++L+F ETK+ + ++ L
Sbjct: 310 LDDLIYTDKVLIFAETKKRCEDLSQSL 336
>UniRef50_Q4PDT1 Cluster: ATP-dependent RNA helicase DBP3; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP3 -
Ustilago maydis (Smut fungus)
Length = 585
Score = 95.9 bits (228), Expect = 1e-18
Identities = 46/77 (59%), Positives = 58/77 (75%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
S IHGD Q ER +L+ FKS + +LVAT VAARGLDI NV+ VVNY P +I++YVHR
Sbjct: 448 SGIHGDLGQNERIASLERFKSAETPLLVATDVAARGLDIPNVEHVVNYTFPLTIEDYVHR 507
Query: 709 IGRTGRVGNRGKAVSFY 759
IGRTGR G GK+++F+
Sbjct: 508 IGRTGRGGKTGKSLTFF 524
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 30 YGGTAVRHQGD--NIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFM 203
YGG + + Q N + I+V TPGR+ D + V ++VLDEADRMLD GF
Sbjct: 274 YGGVSKQEQVRLLNQSPPVRIVVGTPGRVLDMARDGSLDLSGVTYLVLDEADRMLDKGFE 333
Query: 204 PSIEKMM 224
P I ++
Sbjct: 334 PDIRAII 340
Score = 37.9 bits (84), Expect = 0.32
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQ-IFIEVTKYEKRNSLKQ 427
R T MFSAT+P ++ LA F+N + V VG A+ VEQ + + Y K L
Sbjct: 350 RHTSMFSATWPPAVRGLAESFMNGPVRVTVGSDELSANRRVEQTVEVLADGYAKERRLND 409
Query: 428 LIEENDGKR----ILVFVETKRNADFIAAMLR 511
+ + +R IL+F K+ A I LR
Sbjct: 410 FLRSVNAQRSKDKILIFALYKKEAQRIEQTLR 441
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 95.9 bits (228), Expect = 1e-18
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGD+ Q ER+ L FK+GK I+VAT VA+RG+D++N+ V+NYD P + ++Y+HRI
Sbjct: 410 SIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRI 469
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G G A++ +
Sbjct: 470 GRTGRAGAMGTAITLF 485
Score = 68.1 bits (159), Expect = 3e-10
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ YGG Q +++RG + +ATPGRL D +E + + V ++VLDEADRM
Sbjct: 234 SRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRM 293
Query: 186 LDMGFMPSIEKMM 224
LDMGF P I K++
Sbjct: 294 LDMGFEPQIRKII 306
Score = 63.3 bits (147), Expect = 7e-09
Identities = 38/91 (41%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQTLM+SAT+P++++ LA FL +++ V +G + A+ + QI VT+ EKR+ + +
Sbjct: 312 DRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVEVVTEMEKRDRMIK 371
Query: 428 LIE---ENDGKRILVFVETKRNADFIAAMLR 511
+E EN +IL+FV TKR AD I LR
Sbjct: 372 HMEKVMENKENKILIFVGTKRVADEITRFLR 402
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 95.5 bits (227), Expect = 1e-18
Identities = 47/99 (47%), Positives = 63/99 (63%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
CR K C+ S + ++ T +IHGD Q RE+AL+ F+ G ILVAT VAARG+D+
Sbjct: 310 CRTKRACQRLSDDLDDRGFKTRAIHGDLTQVAREKALKKFRHGDATILVATDVAARGIDV 369
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
V V+N++ P+ YVHRIGRTGR G +G AV+ D
Sbjct: 370 TGVSHVINHECPEDEKTYVHRIGRTGRAGAKGVAVTLVD 408
Score = 69.7 bits (163), Expect = 8e-11
Identities = 31/70 (44%), Positives = 42/70 (60%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
+V YGG Q D + G ++V TPGRL D +R + VR VVLDEAD MLD+
Sbjct: 161 RVLTVYGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDL 220
Query: 195 GFMPSIEKMM 224
GF+P +E ++
Sbjct: 221 GFLPDVENLI 230
Score = 41.5 bits (93), Expect = 0.026
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFV-AVGIVGGAST-DVEQIFIEVTKYEKRNSLKQ 427
RQT++FSAT P I LA L+ + V A G A+ D +Q + +K + +
Sbjct: 237 RQTMLFSATMPAPIMALARSQLHRPVHVRAEGADTQATVPDTQQFVYQAHPLDKIEIIGR 296
Query: 428 LIEENDGKRILVFVETKR 481
+++ ND +++++F TKR
Sbjct: 297 ILQANDVEKVIIFCRTKR 314
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 95.5 bits (227), Expect = 1e-18
Identities = 46/105 (43%), Positives = 65/105 (61%)
Frame = +1
Query: 445 W*KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAV 624
W + L R K + + + + +SIH +R Q R +AL FK+G+ +LVAT +
Sbjct: 243 WSQTLVFIRTKRTADALVTELEDAGIAAASIHANRTQHARTQALNAFKAGEIQVLVATDI 302
Query: 625 AARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
AARG+D+ + VVNYDLP ++YVHRIGRTGR GN G A+S +
Sbjct: 303 AARGIDVSQLPCVVNYDLPYVPEDYVHRIGRTGRAGNTGTAISLF 347
Score = 62.1 bits (144), Expect = 2e-08
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG + Q + G +L+ATPGRL D E+ + F ++ +V DEADRMLD+GF+
Sbjct: 108 YGGVRIEPQIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDD 167
Query: 210 IEKM 221
++++
Sbjct: 168 VKRI 171
Score = 60.1 bits (139), Expect = 7e-08
Identities = 33/89 (37%), Positives = 49/89 (55%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSATF + I+H A LN + V V V Q F + + K +L QL
Sbjct: 178 KRQTLLFSATFSKQIKHFAREMLNAPKTIEVSAVNSTVDLVAQTFHPIEQARKSAALIQL 237
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNS 517
I+++ + LVF+ TKR AD + L ++
Sbjct: 238 IQQHRWSQTLVFIRTKRTADALVTELEDA 266
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 95.5 bits (227), Expect = 1e-18
Identities = 42/72 (58%), Positives = 53/72 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HGD+ QR+R E + F+ G ILVAT VAARG+D+ VD V+NYD+P I+ YVHRI
Sbjct: 269 SLHGDKTQRDRTEVMSKFRKGLANILVATDVAARGIDVTGVDAVINYDVPLDIENYVHRI 328
Query: 712 GRTGRVGNRGKA 747
GRTGR G GK+
Sbjct: 329 GRTGRAGQLGKS 340
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+V YGG ++ Q ++ G HI+V TPGR+ D ++R ++ + ++LDEAD ML+
Sbjct: 99 LRVLAVYGGESIERQIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLN 158
Query: 192 MGFMPSIEKMM 224
MGF IE ++
Sbjct: 159 MGFREDIELIL 169
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQT++FSAT I LA RF NN + + + VEQ + V +K + Q+
Sbjct: 175 ERQTVLFSATLAPPILALAKRFQNNPEIIKIERKELTISTVEQFYYLVKNSQKTEIVTQI 234
Query: 431 IEENDGKRILVFVETKRNADFIAAMLR 511
I+ N+ + +L+F TKR + + L+
Sbjct: 235 IDLNNLQLMLIFCNTKRKVEEVTDELK 261
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/71 (63%), Positives = 54/71 (76%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH DR QRER EAL+ FKSGK +LVAT +AARGLDI V V+NYD+P++ ++YVHRIG
Sbjct: 401 IHSDRNQRERVEALEGFKSGKFEVLVATDIAARGLDIAGVSHVINYDVPENPEDYVHRIG 460
Query: 715 RTGRVGNRGKA 747
RTGR G A
Sbjct: 461 RTGRANASGDA 471
Score = 72.1 bits (169), Expect = 2e-11
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V YGG Q +++ RG ++ ATPGRL D +E+ ++ V +VLDE DRMLD
Sbjct: 230 LTATVVYGGVGYGKQREDLQRGVDVVAATPGRLLDHIEQGTMTLADVEILVLDEVDRMLD 289
Query: 192 MGFMPSIEKMM 224
MGF+P +++++
Sbjct: 290 MGFLPDVKRIV 300
Score = 48.8 bits (111), Expect = 2e-04
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL FSAT P ++ LA L + + + +G + + F V +K + L L+
Sbjct: 307 RQTLFFSATLPPELAQLASWALRDPVEIKIGQRRSPAETISHAFYPVVASQKFDLLIDLL 366
Query: 434 EENDGKRILVFVETKRNADFIAAMLR 511
+ K +++F TK AD IA L+
Sbjct: 367 SRTEFKSVIIFTRTKMGADRIAHRLQ 392
>UniRef50_A4B385 Cluster: ATP-dependent RNA helicase, DEAD box
family protein; n=2; Proteobacteria|Rep: ATP-dependent
RNA helicase, DEAD box family protein - Alteromonas
macleodii 'Deep ecotype'
Length = 441
Score = 95.5 bits (227), Expect = 1e-18
Identities = 42/81 (51%), Positives = 57/81 (70%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
EQ L ++ GD +Q +R + F G+H ILV T +A+RGLD+ V +VVN+DLPK+
Sbjct: 268 EQNLEAIALRGDMLQSQRAAVMSAFARGQHSILVTTDLASRGLDLSKVGLVVNFDLPKNA 327
Query: 691 DEYVHRIGRTGRVGNRGKAVS 753
DEY+HRIGRTGR G +G+A S
Sbjct: 328 DEYIHRIGRTGRAGQKGEAFS 348
Score = 47.2 bits (107), Expect = 5e-04
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G L ++ GG Q + R HI+V T GR+ D + V + ++ DEADR
Sbjct: 99 GLNLTCSLIVGGENYNDQVKALRRNPHIIVGTAGRVADHLLDKSVYLNGLELLIFDEADR 158
Query: 183 MLDMGFMPSIE 215
MLD+GF ++
Sbjct: 159 MLDLGFSAQLK 169
Score = 44.0 bits (99), Expect = 0.005
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +2
Query: 233 NHGGDH-ERQTLMFSATFPE-DIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE 406
N DH +RQT++FSAT +++H+ + + VAVG D+EQ +
Sbjct: 172 NDYADHRKRQTMLFSATLDNIELKHMTTQLTKGAVRVAVGDSTAEHGDIEQKCFFADNVD 231
Query: 407 KRNSLKQL-IEENDGKRILVFVETKRNADFIAAMLRNSN 520
++ + Q + + +VF T+ + D IAA+L N
Sbjct: 232 NKDQILQFELANRTYNQAIVFTATREDTDRIAALLNEQN 270
>UniRef50_A5K9H3 Cluster: Pre-mRNA splicing factor RNA helicase PRP28,
putative; n=2; Eukaryota|Rep: Pre-mRNA splicing factor
RNA helicase PRP28, putative - Plasmodium vivax
Length = 1006
Score = 95.5 bits (227), Expect = 1e-18
Identities = 40/84 (47%), Positives = 60/84 (71%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+++ + ++HG + Q RE+ L +FK+G ILVAT VA RG+D++ V +V+N+D+PK
Sbjct: 870 ISKMKFRAVALHGGKAQELREQTLNSFKNGDFDILVATDVAGRGIDVQGVKLVINFDMPK 929
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSF 756
I+ Y HRIGRTGR G +G A+SF
Sbjct: 930 DIESYTHRIGRTGRAGMKGMAISF 953
Score = 60.1 bits (139), Expect = 7e-08
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +3
Query: 18 VAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMG 197
VAV GG Q + +G I++ TPGR+HD +E+ +V+LDEADRM+DMG
Sbjct: 689 VAVV-GGRNAEAQAFELRKGVEIIIGTPGRIHDCLEKAYTVLNQCNYVILDEADRMMDMG 747
Query: 198 FMPSI 212
F S+
Sbjct: 748 FEDSV 752
Score = 56.0 bits (129), Expect = 1e-06
Identities = 32/99 (32%), Positives = 56/99 (56%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
R T MFSAT P ++ L+ ++L ++++G G +EQ T+ +K+ L++++
Sbjct: 787 RLTQMFSATMPPAVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFTTEGKKKQKLQEIL 846
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIA 550
EE + I+VFV K+ AD IA + S ++F A+A
Sbjct: 847 EEYEAP-IIVFVNQKKVADIIA-----KSISKMKFRAVA 879
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 95.5 bits (227), Expect = 1e-18
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD +Q +RE L FK+G+ ILVAT VAARGLDI+ V V N+D+P+ D YVHRIG
Sbjct: 270 LHGDLLQYQRENTLDKFKAGEVSILVATDVAARGLDIQGVTHVYNFDIPRDPDSYVHRIG 329
Query: 715 RTGRVGNRGKAVSF 756
RTGR GN G A +F
Sbjct: 330 RTGRAGNAGTATTF 343
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/71 (42%), Positives = 41/71 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ YGG R Q + HI+V TPGRL + + R V +R VLDEAD+MLD
Sbjct: 99 IRSVAIYGGQDFRSQVKALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLD 158
Query: 192 MGFMPSIEKMM 224
MGF+ EK++
Sbjct: 159 MGFIDEAEKIL 169
Score = 42.3 bits (95), Expect = 0.015
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL+FSAT +Q LA ++L + + G Q +IE+ + +K +L +L+
Sbjct: 176 RQTLLFSATLSPPVQMLARKYLKDPELIEFEEEGITVPTTVQYYIEMPEKQKFEALTRLL 235
Query: 434 EENDGKRILVFVETKRNADFIAAML 508
++ + +VFV T+ +A L
Sbjct: 236 DQEKPELAIVFVATRIRVGELAKAL 260
>UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;
n=7; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 24 - Arabidopsis thaliana (Mouse-ear cress)
Length = 760
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+++HGD+ Q R E LQ FKSG H +L+AT VAARGLDIK++ VVNYD+ K +D +VHR
Sbjct: 501 AALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHR 560
Query: 709 IGRTGRVGNR 738
IGRTGR G+R
Sbjct: 561 IGRTGRAGDR 570
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+V+ YGG + Q + GC I+VATPGRL D ++ ++ ++VLDEADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 192 MGFMPSIEKMM 224
+GF P + ++
Sbjct: 390 LGFEPQVRSIV 400
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKR-----N 415
+RQTL+FSAT P ++ LA L++ + V VG VG A+ D+ Q+ + ++
Sbjct: 406 DRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLE 465
Query: 416 SLKQLIEENDGKRILVFVETKRNADFIAAML 508
L +I+E D +LVF K D I A L
Sbjct: 466 KLPGMIDEGD---VLVFASKKATVDEIEAQL 493
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+SI+GD+ Q R++AL +FKSGK L+AT VAARGLDI ++ VVN+D+P ++YVHR
Sbjct: 275 ASINGDKSQGARQKALDDFKSGKVRALIATDVAARGLDIAQLEQVVNFDMPYKAEDYVHR 334
Query: 709 IGRTGRVGNRGKAVSF 756
IGRTGR G G AVSF
Sbjct: 335 IGRTGRAGQTGLAVSF 350
Score = 81.4 bits (192), Expect = 3e-14
Identities = 35/71 (49%), Positives = 51/71 (71%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L + YGGT++R Q + +A+G IL+ATPGRL D + + S ++ +VLDEADRMLD
Sbjct: 106 LAIVTVYGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLD 165
Query: 192 MGFMPSIEKMM 224
MGF+P I+++M
Sbjct: 166 MGFLPDIQRIM 176
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTL+FSATF ++ LA R + + V V + V+Q+ V K K L L
Sbjct: 182 ERQTLLFSATFETRVKALAYRLMKEPVEVQVAAANSTADTVKQMVYPVDKKRKSELLAYL 241
Query: 431 IEENDGKRILVFVETKRNADFIAAMLR 511
I + +++LVF +TK+ +D + + L+
Sbjct: 242 IGSRNWQQVLVFTKTKQGSDALVSELK 268
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/73 (60%), Positives = 55/73 (75%)
Frame = +1
Query: 538 HGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGR 717
HGD+ Q R AL+ FK GK ++VAT VAARGLDI+++ VVNYD+P ++YVHRIGR
Sbjct: 275 HGDKAQSARRRALEEFKEGKVRVMVATDVAARGLDIEDLPHVVNYDMPFLAEDYVHRIGR 334
Query: 718 TGRVGNRGKAVSF 756
TGR G +G AVSF
Sbjct: 335 TGRAGKQGHAVSF 347
Score = 73.3 bits (172), Expect = 7e-12
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L VA +GG + Q + G ILVATPGRL + +E VS ++ F+V DEADR+LD
Sbjct: 103 LSVAAIFGGRKMSSQERMLENGVDILVATPGRLEEHIESGNVSVANIEFLVFDEADRILD 162
Query: 192 MGFMPSIEKMML 227
MGF+ ++ K+ML
Sbjct: 163 MGFINAVRKIML 174
Score = 36.3 bits (80), Expect = 0.97
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
Q +MFSAT + L+ L +AV + V + V + K L +LI
Sbjct: 181 QIMMFSATTSSQLNELSKDILRKPKRIAVERENTTAHTVAHVLYPVDQERKTELLSELIG 240
Query: 437 ENDGKRILVFVETKRNADFIAAMLR 511
+ +++LVFV K A+ I L+
Sbjct: 241 RKNWQQVLVFVNYKETANDIVKELK 265
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/97 (45%), Positives = 63/97 (64%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C KT R ++ + +Q IHGD Q ER L+ FK+G+ +LVA+ +AARGLD+
Sbjct: 249 CNRKTTVRQLATTLEQQGFSVGQIHGDMSQPERGSELERFKNGQISVLVASDIAARGLDV 308
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
K + V N+D+P D+Y+HRIGRTGR G G+A++F
Sbjct: 309 KGISHVFNFDVPTHPDDYIHRIGRTGRGGASGEALTF 345
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L +++ GG + Q + +G +L+ATPGRL D ER ++ S +V+DEADRMLD
Sbjct: 101 LSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEADRMLD 160
Query: 192 MGFMPSIEKMMLH-PTMVET 248
MGF+P IE + PT +T
Sbjct: 161 MGFIPDIETICTKLPTSRQT 180
Score = 50.8 bits (116), Expect = 4e-05
Identities = 29/91 (31%), Positives = 44/91 (48%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL+FSAT P I+ LA RFL+N + + A+T ++Q IEV+ K+ L ++
Sbjct: 178 RQTLLFSATMPPAIKKLADRFLSNPKQIEISRPATANTLIDQRLIEVSPRSKKKKLCDML 237
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSNCS 526
++F K +A L S
Sbjct: 238 RAEKDHTAIIFCNRKTTVRQLATTLEQQGFS 268
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 95.1 bits (226), Expect = 2e-18
Identities = 48/103 (46%), Positives = 66/103 (64%)
Frame = +1
Query: 445 W*KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAV 624
W + L R K + ++ ++ + ++IHG++ QRER L F +G +LVAT V
Sbjct: 246 WGQTLVFVRTKKRVDELTQYLCKEGINAAAIHGEKSQRERVRMLNEFIAGDLHVLVATDV 305
Query: 625 AARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
AARGLDI+++ VVNYDLP + YVHRIGRTGR G G+AVS
Sbjct: 306 AARGLDIESLPYVVNYDLPNQPEAYVHRIGRTGRAGETGEAVS 348
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++V YGG V +Q + RG ILVATPGRL D + + +S + ++VLDEADRMLD
Sbjct: 105 MRVISVYGGVPVENQIKRLKRGTDILVATPGRLLDLLRQKAISLEKLEYLVLDEADRMLD 164
Query: 192 MGFMPSIEKMM 224
+GF+ I+K+M
Sbjct: 165 LGFIDPIQKIM 175
Score = 52.0 bits (119), Expect = 2e-05
Identities = 36/112 (32%), Positives = 54/112 (48%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+F+AT E ++ LA +LNN + V + + Q +V +K + L L
Sbjct: 181 DRQTLLFTATADESVEVLAEFYLNNPTKIKVTPRNSTAKQIRQFAYQVDYGQKADILSYL 240
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
I E + LVFV TK+ D + L + AI S R+R R+L
Sbjct: 241 ITEGKWGQTLVFVRTKKRVDELTQYLCKEG---INAAAIHGEKSQRERVRML 289
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/79 (55%), Positives = 58/79 (73%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T +IHG++ Q +R AL++F+SG+ +LVAT VAARG+D+ V VVN+DLP + YVH
Sbjct: 266 TDAIHGNKTQNKRNRALESFRSGRLQVLVATDVAARGIDVDGVTHVVNFDLPIDPESYVH 325
Query: 706 RIGRTGRVGNRGKAVSFYD 762
RIGRTGR G G A+SF D
Sbjct: 326 RIGRTGRAGKEGIALSFCD 344
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/70 (41%), Positives = 44/70 (62%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
++ +GG Q + RG H+ +ATPGRL D +++ V + VLDEADRMLDM
Sbjct: 99 RLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEADRMLDM 158
Query: 195 GFMPSIEKMM 224
GFMP+++ ++
Sbjct: 159 GFMPALKTIV 168
Score = 58.8 bits (136), Expect = 2e-07
Identities = 39/112 (34%), Positives = 58/112 (51%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT+ F+AT P + LA LNN + + V + VEQ + V++ +KR L+
Sbjct: 174 QRQTIFFTATMPPKVAQLASGLLNNPVRIEVAPESTTAERVEQRLMYVSQGDKRALLEHS 233
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
++ R LVF +TK AD +A L N S ++ AI N + KR R L
Sbjct: 234 LQAEGVGRTLVFTKTKHGADRLAKEL---NASGIRTDAIHGNKTQNKRNRAL 282
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 95.1 bits (226), Expect = 2e-18
Identities = 44/102 (43%), Positives = 63/102 (61%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K + CR K + ++++ L IHGD Q R AL +FK+ K +LVAT V
Sbjct: 246 KAIVFCRTKRGTERITQRLSKKTKLVHCIHGDMQQGARNRALSDFKASKFRVLVATDVVG 305
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
RG+DI +V ++NYD+P+ D+YVHR+GRTGR+G G A +F
Sbjct: 306 RGIDISDVSHIINYDIPEFSDDYVHRVGRTGRMGKEGIAYTF 347
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/74 (47%), Positives = 47/74 (63%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G + V YGG +R Q + + R HI+V TPGR+ D + R + +R VVLDEADR
Sbjct: 100 GQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEADR 159
Query: 183 MLDMGFMPSIEKMM 224
MLD+GF P IEK++
Sbjct: 160 MLDIGFRPDIEKIL 173
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/86 (32%), Positives = 45/86 (52%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTL+ SAT P I+ LA R++ N V ++ +EQ + V +K + L +L
Sbjct: 179 ERQTLLLSATVPPTIEKLAQRYMRNPEKVDFSPTNISAETIEQRYFTVDHSKKFDMLVEL 238
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
++ ++ +VF TKR + I L
Sbjct: 239 LKREQPQKAIVFCRTKRGTERITQRL 264
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 95.1 bits (226), Expect = 2e-18
Identities = 40/84 (47%), Positives = 62/84 (73%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
++ Q S+HG + Q +R+E + +FK+ IL+AT +A+RGLDIK++++VVN+D P
Sbjct: 776 LSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLASRGLDIKDLNLVVNFDCPD 835
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSF 756
+++YVHR+GRTGR GNRG A +F
Sbjct: 836 HLEDYVHRVGRTGRAGNRGTAYTF 859
Score = 62.1 bits (144), Expect = 2e-08
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFV---ERNRVSFGSVRFVVLDEADR 182
L+ A YGG ++ Q + RG I+V TPGR+ D + R + V F+VLDEADR
Sbjct: 611 LRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADR 670
Query: 183 MLDMGFMPSI 212
M DMGF P I
Sbjct: 671 MFDMGFGPQI 680
Score = 51.6 bits (118), Expect = 2e-05
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKR-NSLKQ 427
+RQT+MFSATFP ++++A + LN L + G S+D+EQ F+EV E R L +
Sbjct: 690 DRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSSDIEQ-FVEVRPTETRFRRLIE 748
Query: 428 LIEENDGK-RILVFVETKRNADFIAAMLRNS 517
L+ K +IL+F + D + L NS
Sbjct: 749 LLSIWYHKGQILIFTNRQETTDNLYRQLSNS 779
>UniRef50_Q7Q0A7 Cluster: ENSANGP00000011621; n=5;
Endopterygota|Rep: ENSANGP00000011621 - Anopheles
gambiae str. PEST
Length = 523
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH DR QRER+ ++ F+ GK IL+ T + +RG+D K V++VVNYD P S YVHRIG
Sbjct: 420 IHSDRTQRERDNVVRAFREGKIWILICTELMSRGIDFKGVNLVVNYDFPPSTISYVHRIG 479
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G GKAV+F+
Sbjct: 480 RTGRAGRPGKAVTFF 494
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 95.1 bits (226), Expect = 2e-18
Identities = 40/75 (53%), Positives = 56/75 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD+ Q ER L F++G I++AT VAARGLDIK+++ V+N+D P I++Y+HRIG
Sbjct: 267 IHGDKKQEERTWVLNEFRTGASPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIG 326
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G G ++SF+
Sbjct: 327 RTGRAGATGVSLSFF 341
Score = 69.3 bits (162), Expect = 1e-10
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 GSVLKV--AVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEA 176
GS+ K+ YGG R Q +I G I +A PGRL D +E + V ++VLDEA
Sbjct: 85 GSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEA 144
Query: 177 DRMLDMGFMPSIEKMM 224
DRMLDMGF P I K++
Sbjct: 145 DRMLDMGFEPQIRKLV 160
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNY-LFVAVGIVGG--ASTDVEQIFIEVTKYEKRNSL 421
+RQTL++SAT+P+++Q LA + + VG V AS +++Q V + EK+ L
Sbjct: 166 DRQTLLWSATWPKEVQKLARDLCKEIPIHINVGSVDALKASHNIKQYVNVVEESEKKARL 225
Query: 422 KQLIEE---NDGKRILVFVETKRNADFIAAMLR 511
K + + ++L+F ETKR AD + LR
Sbjct: 226 KMFLGQVMVESAPKVLIFCETKRGADILTKELR 258
>UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n=3;
Piroplasmida|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 707
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/95 (44%), Positives = 70/95 (73%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+S + ++ ++S+HG++ Q +RE L F+SG +LVAT VAARGLDIK++D V+N D
Sbjct: 581 TSALRYRRFKSASLHGNKTQAQRERILNMFRSGDVNVLVATDVAARGLDIKDIDYVINLD 640
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYDLIRI*P 780
+PKS+ +Y+HRIGRTGR ++G+++ ++ + + P
Sbjct: 641 VPKSLLDYIHRIGRTGRGNSKGESLLYFPIDTLTP 675
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L++ YGG + Q + G I+VATPGRL +F+ + V + V+DEADRMLD
Sbjct: 420 LRLVPIYGGASKFAQVRELQNGAEIMVATPGRLLEFLSNGTIKLNRVSYFVMDEADRMLD 479
Query: 192 MGFMPSIEKMM 224
MGF P I K++
Sbjct: 480 MGFEPQIRKIV 490
Score = 48.0 bits (109), Expect = 3e-04
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVG-IVGGASTDVEQIFIEVTKYEKRNSLK 424
+RQTLMFSAT+P +I+ LA F N +++ VG + A+ ++ Q YE R+ L
Sbjct: 496 DRQTLMFSATWPSEIKRLASEFCKANSIYIQVGDLELTANPNIRQNVEFPNSYEVRDKLF 555
Query: 425 QLIEE-NDGKRILVFVETKRNADFIAAMLR 511
+ K++L+F + K AD + + LR
Sbjct: 556 DFLGSIPPEKKVLIFSDLKSFADQLTSALR 585
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/76 (55%), Positives = 57/76 (75%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHGD+ Q+ER+ L F++G+ ILVAT VAARGLD+++V V+NYD P + ++YVHRI
Sbjct: 398 SIHGDKSQQERDYVLNAFRNGRQGILVATDVAARGLDVEDVKFVINYDYPSNSEDYVHRI 457
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR N G A + +
Sbjct: 458 GRTGRSNNTGTAYTLF 473
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
+GG Q ++ RG I++ATPGRL DF+ER + ++VLDEADRMLDMGF P
Sbjct: 230 FGGAPKGPQIRDLERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFEPQ 289
Query: 210 IEKMM 224
I K+M
Sbjct: 290 IRKIM 294
Score = 60.9 bits (141), Expect = 4e-08
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQ LM+SAT+P+++++LA FLN+Y+ + +G + A+ ++ QI YEK L +
Sbjct: 300 DRQVLMWSATWPKEVRNLAEEFLNDYIQINIGSLNLSANHNILQIVDVCEDYEKDQKLMK 359
Query: 428 LIEE---NDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
L+ E + + ++FVETKR D I RN N + + +I + S ++R +L
Sbjct: 360 LLTEISAENETKTIIFVETKRRVDDIT---RNINRNGWRAVSIHGDKSQQERDYVL 412
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/104 (41%), Positives = 66/104 (63%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L C+ K + ++ L +HGD Q ER++ + FKSG L+ T +A+
Sbjct: 678 KLLIFCQKKLDTQKLEYRLSIHGLKARYLHGDLKQAERDQIMVEFKSGAINCLITTNLAS 737
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
RGLD+ +VD+V+NYD P +I++Y+HRIGRTGR G +G+A+S +
Sbjct: 738 RGLDVSDVDVVINYDFPDTIEDYIHRIGRTGRAGKKGQAISLLE 781
Score = 49.6 bits (113), Expect = 1e-04
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
++++TPGRL DF+ ++ + S+ VVLDEADRMLDMGF I +++
Sbjct: 559 VIISTPGRLLDFM-KDGLPLNSITQVVLDEADRMLDMGFEDQITQIL 604
Score = 41.5 bits (93), Expect = 0.026
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVG-GASTDVEQ--IFIEVTKYEKRNS 418
+RQTL FSAT+P ++Q LA N + + + +G G + +++Q I + K+EK
Sbjct: 610 DRQTLFFSATWPNEVQRLANSLCNQDPIMIQLGEQGLSVNKNIQQEVIIVYENKFEK--- 666
Query: 419 LKQLIEENDGKRILVFVETK 478
+L + G+++L+F + K
Sbjct: 667 FAELTDRLKGQKLLIFCQKK 686
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 95.1 bits (226), Expect = 2e-18
Identities = 40/86 (46%), Positives = 60/86 (69%)
Frame = +1
Query: 499 SHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDL 678
S + + ++HGD Q++R+ + F+SG +L+AT VAARG+D+ +VDIV NYD+
Sbjct: 262 SRMQARGYFVEALHGDMKQQQRDRVMARFRSGSIDVLIATDVAARGIDVDDVDIVFNYDV 321
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSF 756
P+ ++ YVHRIGRT R G GK+V+F
Sbjct: 322 PQDVEYYVHRIGRTARAGRTGKSVTF 347
Score = 57.2 bits (132), Expect = 5e-07
Identities = 27/68 (39%), Positives = 38/68 (55%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V YGG + Q + +++ TPGR+ D ++R + SV +LDEAD+MLD
Sbjct: 103 LNVVPIYGGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLD 162
Query: 192 MGFMPSIE 215
MGF IE
Sbjct: 163 MGFREDIE 170
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/87 (32%), Positives = 49/87 (56%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT++FSAT P+ I + RF + FV + +EQ +IEV + +K +L +
Sbjct: 179 DRQTILFSATMPQPILDITRRFQRDPQFVKITRKELTVPQIEQTYIEVRERDKLEALCRT 238
Query: 431 IEENDGKRILVFVETKRNADFIAAMLR 511
++ N+ + LVF TKR D + + ++
Sbjct: 239 LDMNNPELALVFCNTKRTVDDLMSRMQ 265
>UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6;
Ascomycota|Rep: ATP-dependent rRNA helicase RRP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 501
Score = 95.1 bits (226), Expect = 2e-18
Identities = 46/82 (56%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+++HGD Q +R +L FK+GK ILVAT VAARGLDI +VDIVVNYD+P Y+HR
Sbjct: 349 TALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHR 408
Query: 709 IGRTGRVGNRGKAVSF---YDL 765
+GRT R G GK++S YDL
Sbjct: 409 VGRTARAGRSGKSISLVSQYDL 430
Score = 62.1 bits (144), Expect = 2e-08
Identities = 31/75 (41%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNR-VSFGSVRFVVLDEADRMLDMGFMPS 209
GG + Q ++ R HI++ATPGRL D +E + S ++F+V+DEADR+LDM F P
Sbjct: 185 GGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPV 244
Query: 210 IEKMM-LHPTMVETT 251
+++++ + PT TT
Sbjct: 245 LDRILKIIPTQERTT 259
>UniRef50_A5DIX5 Cluster: ATP-dependent RNA helicase ROK1; n=2;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
ROK1 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 537
Score = 95.1 bits (226), Expect = 2e-18
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH +R ++REEA++ FK+G +L+ T V ARG+D K V++V+NYD+P++ YVHRIG
Sbjct: 382 IHAERTPKQREEAIRRFKNGDAWVLITTDVLARGVDFKGVNLVINYDVPQTSQAYVHRIG 441
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G GKAV+F+
Sbjct: 442 RTGRGGKEGKAVTFF 456
Score = 47.6 bits (108), Expect = 4e-04
Identities = 19/52 (36%), Positives = 34/52 (65%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMMLHPTM 239
+L+ TP RL D V++ +V V +V+DEAD++ D GF+ ++++ H T+
Sbjct: 232 VLICTPLRLIDLVKKEQVDLSKVEHLVIDEADKLFDHGFVEQTDEILSHCTL 283
Score = 44.4 bits (100), Expect = 0.004
Identities = 22/76 (28%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQL 430
R+T MFSAT P ++ +A + + + + VG GAST ++Q + E K +++Q+
Sbjct: 286 RRTSMFSATIPSGVEEMANSIMKDQIRIIVGHKEGASTSIDQKLVFTGNEEGKLLAIRQM 345
Query: 431 IEENDGK-RILVFVET 475
+++ + K I++F+++
Sbjct: 346 VQQGEFKPPIIIFLQS 361
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 95.1 bits (226), Expect = 2e-18
Identities = 39/86 (45%), Positives = 64/86 (74%)
Frame = +1
Query: 499 SHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDL 678
S + ++ ++SIHG + Q +R+ + ++K+G +L+AT+V ARGLD+K++ +VVNYD
Sbjct: 686 SDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNYDC 745
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSF 756
P +++YVHR+GRTGR G+ G AV+F
Sbjct: 746 PNHMEDYVHRVGRTGRAGHTGVAVTF 771
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERN--RV-SFGSVRFVVLDEADR 182
++ AYGG ++ Q ++ RG I+V TPGR+ D + N RV + ++VLDEADR
Sbjct: 520 IRACCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADR 579
Query: 183 MLDMGFMPSIEKMM 224
M D+GF P + +++
Sbjct: 580 MFDLGFEPQVMRII 593
Score = 46.0 bits (104), Expect = 0.001
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNS---- 418
+RQT++FSATFP ++ LA + L + + VG +++VEQI +EV E + S
Sbjct: 599 DRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLE 657
Query: 419 -LKQLIEENDGKRILVFVETKRNADFIAAML 508
L +L R LVFV+ + +AD + + L
Sbjct: 658 LLGELYNNQLDVRTLVFVDRQESADALLSDL 688
>UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n=6;
Trypanosomatidae|Rep: Putative DEAD-box RNA helicase
HEL64 - Trypanosoma brucei brucei
Length = 568
Score = 95.1 bits (226), Expect = 2e-18
Identities = 43/73 (58%), Positives = 52/73 (71%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHGD+ QR+RE L F+ LVAT VAARGLDIK ++ V+NYD P ID+YVHRI
Sbjct: 374 AIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINYDFPMQIDDYVHRI 433
Query: 712 GRTGRVGNRGKAV 750
GRTGR G G+ V
Sbjct: 434 GRTGRAGGEGRCV 446
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG Q + RG HILVATPGRL DF++ R++ V ++VLDEADRMLDMGF P
Sbjct: 209 YGGAPKGPQLGLLRRGVHILVATPGRLIDFLDIKRINLHRVTYLVLDEADRMLDMGFEPQ 268
Query: 210 IEKM 221
+ K+
Sbjct: 269 VRKI 272
Score = 70.9 bits (166), Expect = 4e-11
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT+MFSAT+P +IQ LA F ++ ++VG A+ DV Q FI ++ K++ L++
Sbjct: 279 DRQTVMFSATWPREIQRLAAEFQKQWIRISVGSTELQANKDVTQRFILTQEFAKQDELRK 338
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLR 511
L++E+ +R+LVF + KR AD + LR
Sbjct: 339 LMQEHREERVLVFCKMKRTADELERQLR 366
>UniRef50_Q9BUQ8 Cluster: Probable ATP-dependent RNA helicase DDX23;
n=50; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX23 - Homo sapiens (Human)
Length = 820
Score = 95.1 bits (226), Expect = 2e-18
Identities = 42/75 (56%), Positives = 58/75 (77%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HG + Q +RE AL N K+G ILVAT VA RG+DI++V +VVNYD+ K+I++Y+HRI
Sbjct: 693 TLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRI 752
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G A++F
Sbjct: 753 GRTGRAGKSGVAITF 767
Score = 72.1 bits (169), Expect = 2e-11
Identities = 31/73 (42%), Positives = 45/73 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ GG + QG + GC I++ATPGRL D +E + +VVLDEADRM+D
Sbjct: 497 IRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID 556
Query: 192 MGFMPSIEKMMLH 230
MGF P ++K++ H
Sbjct: 557 MGFEPDVQKILEH 569
Score = 56.4 bits (130), Expect = 8e-07
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +2
Query: 242 GDHE-RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNS 418
G H+ RQT+MF+AT P ++ LA +L V +G G VEQ +++ EKR
Sbjct: 595 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKK 654
Query: 419 LKQLIEENDGKRILVFVETKRNADFIAAML 508
L ++E+ I++FV K+ D +A L
Sbjct: 655 LLAILEQGFDPPIIIFVNQKKGCDVLAKSL 684
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 94.7 bits (225), Expect = 3e-18
Identities = 45/102 (44%), Positives = 63/102 (61%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K L C+ K + + + + +S+H + Q REEALQNFK +LVAT VAA
Sbjct: 247 KVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAA 306
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
RG+D+ N+ +V+NY+LP+ Y+HRIGRT R G G A+SF
Sbjct: 307 RGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISF 348
Score = 71.3 bits (167), Expect = 3e-11
Identities = 35/74 (47%), Positives = 46/74 (62%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G LK V YGG + Q D+I G ILVATPGRL D +E ++F ++ VLDEAD
Sbjct: 101 GLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADT 160
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF ++ ++
Sbjct: 161 MLDMGFFKDVQSII 174
Score = 44.0 bits (99), Expect = 0.005
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL+FSAT P +I+ LA L + + + V Q + K K L ++
Sbjct: 181 RQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNIL 240
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSN 520
+ D +++L+F +TK AD I L ++
Sbjct: 241 TKADYEKVLIFCKTKYGADIIVKALEKAS 269
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 94.7 bits (225), Expect = 3e-18
Identities = 42/90 (46%), Positives = 62/90 (68%)
Frame = +1
Query: 490 LHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVN 669
L H A++ S+HGD+ Q +R +AL FK G +++AT VA+RGLDI +V++V+N
Sbjct: 397 LDKYHKAQRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVIN 456
Query: 670 YDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
Y P + ++YVHRIGRTGR G +G A +F+
Sbjct: 457 YSYPLTTEDYVHRIGRTGRAGKKGVAHTFF 486
Score = 66.5 bits (155), Expect = 8e-10
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGGT+ Q + G I++ TPGR+ D +E V FVVLDEADRMLDMGF P
Sbjct: 265 YGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPE 324
Query: 210 IEKMMLHPTMVETT 251
+ ++ V T
Sbjct: 325 VRAILSQTASVRQT 338
Score = 37.5 bits (83), Expect = 0.42
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLD 170
YGGT+ Q + G I++ TPGR+ D +E V FV+ D
Sbjct: 202 YGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
Score = 35.1 bits (77), Expect = 2.2
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNS 418
RQT+MFSAT+P + LA F++ N + V +G A+ DV QI +EV R+S
Sbjct: 336 RQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAANHDVMQI-VEVLDDRSRDS 391
>UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1127
Score = 94.7 bits (225), Expect = 3e-18
Identities = 37/92 (40%), Positives = 63/92 (68%)
Frame = +1
Query: 484 CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
C S + ++ ++HG++ Q +R+ ++ +K G +L AT +A+RGLD+ ++ +V
Sbjct: 363 CEQLSVDMTQEGYYAVALHGNKTQGQRDSIMECYKKGDTKLLCATDLASRGLDVSDITVV 422
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
+NYD PK D+Y+HRIGRTGR G +G+A+SF+
Sbjct: 423 INYDFPKYFDDYIHRIGRTGRAGRKGRAISFF 454
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L VA AYGG Q I R ILVA PGRL DF++ + V ++V+DEADR+LD
Sbjct: 206 LTVATAYGGQNRDQQAQQIKRNPDILVACPGRLKDFLQEGILDLSKVTYLVIDEADRLLD 265
Query: 192 MGF 200
MGF
Sbjct: 266 MGF 268
Score = 34.7 bits (76), Expect = 3.0
Identities = 21/79 (26%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRF-LNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLK 424
+RQT+ FSAT+P+ +++L+ F + ++V VG + +++Q I + +K +L
Sbjct: 282 DRQTVFFSATWPKAVRNLSLDFCAEDPIYVQVGRSNLTVNKNIDQEIICLYNNQKLQTLL 341
Query: 425 QLIEE-NDGKRILVFVETK 478
++++ ++L+F ET+
Sbjct: 342 DILDQLKINDKVLIFAETR 360
>UniRef50_Q6C024 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Yarrowia lipolytica|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Yarrowia lipolytica (Candida lipolytica)
Length = 575
Score = 94.7 bits (225), Expect = 3e-18
Identities = 43/77 (55%), Positives = 56/77 (72%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T+ IHG + Q +RE+A+Q+ K G +LVAT VA RGLDI NV +VVN+ + +I+ Y H
Sbjct: 458 TAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTH 517
Query: 706 RIGRTGRVGNRGKAVSF 756
RIGRTGR G RG AV+F
Sbjct: 518 RIGRTGRAGKRGTAVTF 534
Score = 63.3 bits (147), Expect = 7e-09
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
KV GG + + Q + G ++VATPGRL D ++R + +VV+DEADRM+DM
Sbjct: 269 KVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDM 328
Query: 195 GFMPSIEKMM 224
GF ++K++
Sbjct: 329 GFEEQVQKVL 338
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQI--FIEVTKYEKRNSLKQ 427
RQT+M++AT P I+ LA ++L V +G G A + V Q+ F+ + KR L
Sbjct: 365 RQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLNTDEKRKRRLLDI 424
Query: 428 LIEENDGKRILVFVETKRNADFIAAML 508
+ + I+VF+ KR+ + ++ L
Sbjct: 425 ISKRQYRPPIVVFLNYKRDCEAVSDAL 451
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/103 (46%), Positives = 65/103 (63%)
Frame = +1
Query: 445 W*KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAV 624
W + L R K + + + + S+IHG++ Q R AL +FK G+ ILVAT +
Sbjct: 247 WDQALVFSRTKHGANKITKQLEDAGIRASAIHGNKSQGARTRALADFKEGRIRILVATDI 306
Query: 625 AARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
AARGLDI+ + VVN+DLP ++YVHRIGRTGR G GKA+S
Sbjct: 307 AARGLDIEQLPHVVNFDLPDVAEDYVHRIGRTGRAGATGKAIS 349
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/71 (46%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK V +GG + Q + RG IL+ATPGR+ D + V F + +VLDEADRMLD
Sbjct: 106 LKSTVVFGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLD 165
Query: 192 MGFMPSIEKMM 224
MGF+ I+K++
Sbjct: 166 MGFIHDIKKIL 176
Score = 54.0 bits (124), Expect = 5e-06
Identities = 39/112 (34%), Positives = 56/112 (50%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ L+FSATF +I+ LA +NN + ++V + VEQ V K K L QL
Sbjct: 182 KRQNLLFSATFSPEIRQLAKGLVNNPIEISVTPRNATAVSVEQWLHPVDKKRKTELLIQL 241
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
I + + LVF TK A+ I L ++ ++ +AI N S R R L
Sbjct: 242 IADGRWDQALVFSRTKHGANKITKQLEDAG---IRASAIHGNKSQGARTRAL 290
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 94.3 bits (224), Expect = 3e-18
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD Q +RE LQ F+ + +L+AT VAARGLDI +VD+V++Y+LP ++ +VHR G
Sbjct: 302 LHGDIAQAQRERTLQRFRDNRFTVLIATDVAARGLDISDVDLVIHYELPNDVESFVHRCG 361
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G +G A++ Y
Sbjct: 362 RTGRAGQQGAAIAMY 376
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L A YGGT + Q + RG I+V TPGR+ D + R + + FVVLDEAD+ML+
Sbjct: 128 LDTACVYGGTPIGQQESKLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFVVLDEADQMLN 187
Query: 192 MGFMPSIEKMM 224
+GF +E ++
Sbjct: 188 VGFEEDVEAIL 198
Score = 35.9 bits (79), Expect = 1.3
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG----ASTDVEQIFIEVTKYEKRNSL 421
RQT +FSAT P+ ++ + +FL V V +VG + ++ + V++ + + +
Sbjct: 205 RQTFLFSATMPQWVKQITKKFLKAQ-HVVVDLVGDNKQKVADTIDLMTCAVSQTSRTSIV 263
Query: 422 KQLIE-ENDGKRILVFVETKRNADFIAAML 508
L+ K+ + F +TKR AD + A L
Sbjct: 264 MDLVTVYAKDKKCICFTQTKRAADELTAAL 293
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 94.3 bits (224), Expect = 3e-18
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HG + Q +R + +FKS ILVAT+VAARGLD+K++ +V+NYD P +++YVHR+
Sbjct: 606 SLHGSKEQSDRHSTISDFKSDVCNILVATSVAARGLDVKDLRLVINYDTPNHLEDYVHRV 665
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G +G AV+F
Sbjct: 666 GRTGRAGQKGTAVTF 680
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVR---FVVLDEADRMLDMGF 200
YGG+ + Q + RG I+ TPGR+ D + ++R ++VLDEADRM DMGF
Sbjct: 438 YGGSGIAAQIGELKRGAEIVACTPGRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGF 497
Query: 201 MPSIEKMM 224
P I +++
Sbjct: 498 EPQITRIL 505
Score = 46.8 bits (106), Expect = 7e-04
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKR--NSLK 424
+RQT+MFSATFP ++ LA L N + + +G ++D++Q+ +E+ E R L+
Sbjct: 511 DRQTVMFSATFPHTMEALARAALENPVEIQIGGKSVVNSDIDQV-VEIRPEEDRFLRVLE 569
Query: 425 QLIEENDGKRILVFVETKRNAD 490
L E + +I++FV ++ AD
Sbjct: 570 LLGEWCERGKIIIFVASQDKAD 591
>UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=15; Pezizomycotina|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Gibberella zeae (Fusarium graminearum)
Length = 1227
Score = 94.3 bits (224), Expect = 3e-18
Identities = 41/75 (54%), Positives = 56/75 (74%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHG + Q +R+ + +FK G IL+AT+VAARGLD+K + +V+NYD P +++YVHR
Sbjct: 876 SIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRA 935
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR GN G AV+F
Sbjct: 936 GRTGRAGNTGVAVTF 950
Score = 67.3 bits (157), Expect = 5e-10
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR---VSFGSVRFVVLDEADR 182
L+ AYGG +R Q + RG I+V TPGR+ D + N+ + V +VVLDEADR
Sbjct: 699 LRAVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADR 758
Query: 183 MLDMGFMPSIEKM 221
M DMGF P + K+
Sbjct: 759 MFDMGFEPQVMKI 771
Score = 46.4 bits (105), Expect = 0.001
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIF---IEVTKYEK-RNS 418
+RQT++FSAT P I L + L N + V VG + ++EQI E +K+ +
Sbjct: 778 DRQTILFSATMPRIIDSLTKKVLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKFHRVLEL 837
Query: 419 LKQLIEENDGKRILVFVETKRNAD 490
L +L + ++ R L+FVE + AD
Sbjct: 838 LGELYDRDEDARTLIFVERQEKAD 861
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C K + + E SS+HGD Q+ERE ++ F+SG +L++T V ARGLD+
Sbjct: 284 CNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDV 343
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY--DLIRI 774
V +++NYDLP + + Y+HRIGR+GR G +G A++F D IRI
Sbjct: 344 PQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRI 388
Score = 50.4 bits (115), Expect = 6e-05
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GGT V + G H++ TPGR+ D + R + +++ +VLDEAD ML+ GF I
Sbjct: 142 GGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQI 201
>UniRef50_Q9DF36 Cluster: RNA helicase II/Gu; n=9; Tetrapoda|Rep:
RNA helicase II/Gu - Xenopus laevis (African clawed
frog)
Length = 800
Score = 93.9 bits (223), Expect = 5e-18
Identities = 46/104 (44%), Positives = 60/104 (57%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K + C +K S++ + +HGD Q+ERE L+ F+ G +L+AT VAA
Sbjct: 475 KTIIFCDSKLQAHELSTNCGSLKQSAKPLHGDLQQKEREVVLKGFRQGTFEVLIATNVAA 534
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
RGLDI VD+VV Y PK D YVHR GRTGR G G +S Y+
Sbjct: 535 RGLDIPEVDLVVLYSAPKEADAYVHRSGRTGRAGRTGVCISLYE 578
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/71 (43%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LKVA YGGT + Q I G LV TPGR+ D V+ R+ +++ VVLDE D M D
Sbjct: 322 LKVACFYGGTPYQQQVFAIKDGIDFLVGTPGRIRDLVQNYRLDLTALKHVVLDEVDMMFD 381
Query: 192 MGFMPSIEKMM 224
+GF +E+++
Sbjct: 382 VGFSEQVEEIL 392
Score = 34.7 bits (76), Expect = 3.0
Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 6/102 (5%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG----GASTDVEQIFIEVTKYEKRNSLK 424
QTL+FSAT P+ + ++A +++ + V +VG A+ VE + IE + +K L
Sbjct: 405 QTLLFSATCPDWMYNVAKKYMRKQ-YEKVDLVGHRSQKAAITVEHLAIECNRSQKAAVLG 463
Query: 425 QLIEENDGK--RILVFVETKRNADFIAAMLRNSNCSHLQFTA 544
+++ G + ++F ++K A + ++NC L+ +A
Sbjct: 464 DIVQVYSGSHGKTIIFCDSKLQAHEL-----STNCGSLKQSA 500
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 93.9 bits (223), Expect = 5e-18
Identities = 46/96 (47%), Positives = 62/96 (64%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C +K + + ++ ++IHGDR Q ER +AL FK G+ LVAT VAARGLDI
Sbjct: 264 CNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQALDAFKRGEIEALVATDVAARGLDI 323
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+ V+N+DLP + ++YVHRIGRTGR G G A+S
Sbjct: 324 AELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALS 359
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/71 (47%), Positives = 50/71 (70%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ AV +GG + Q + RG IL+ATPGRL D V++ + G V+ +VLDEADRMLD
Sbjct: 116 LRSAVVFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLD 175
Query: 192 MGFMPSIEKMM 224
MGF+P +++++
Sbjct: 176 MGFLPDLQRIL 186
Score = 57.2 bits (132), Expect = 5e-07
Identities = 30/86 (34%), Positives = 51/86 (59%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTL+FSATF +I+ LA +L N + V A++ V QI +V + +K+ ++ +L
Sbjct: 192 ERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVAEGDKQAAVVKL 251
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
I + K+++VF +K A +A +
Sbjct: 252 IRDRSLKQVIVFCNSKIGASRLARQI 277
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 93.9 bits (223), Expect = 5e-18
Identities = 45/99 (45%), Positives = 60/99 (60%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C+ K + + + L +IHGDR Q+ R E L FK G +LVAT +AARGLDI
Sbjct: 282 CKTKQSVDRVTRELVRRNLSAQAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDI 341
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+ V+NY++P ++YVHRIGRTGR G G A+S D
Sbjct: 342 AELPFVINYEMPAQPEDYVHRIGRTGRAGADGVAISLMD 380
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ V +GG + Q ++ GC I+VAT GRL D V++ +S V VVLDEADRMLD
Sbjct: 134 LRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLD 193
Query: 192 MGFMPSIEKMM 224
MGF+ I K+M
Sbjct: 194 MGFIDDIRKIM 204
Score = 60.1 bits (139), Expect = 7e-08
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSATF I+ LA F+N V V + +VEQ I V +KRN L++L
Sbjct: 210 QRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQNTTNANVEQHIIAVDTIQKRNLLERL 269
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCS 526
I + +++VF +TK++ D + L N S
Sbjct: 270 IVDLHMNQVIVFCKTKQSVDRVTRELVRRNLS 301
>UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase RhlE;
n=1; Campylobacter fetus subsp. fetus 82-40|Rep:
Putative ATP-dependent RNA helicase RhlE - Campylobacter
fetus subsp. fetus (strain 82-40)
Length = 624
Score = 93.9 bits (223), Expect = 5e-18
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
SS++ +++HGD+ Q R + L+ FK+GK ILVAT +AARGLDIK + V+N +
Sbjct: 261 SSYLHTLGFSVAALHGDKSQSVRSKTLEKFKNGKTKILVATDIAARGLDIKELPFVINLE 320
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVS 753
LP ++YVHRIGRTGR GN G A+S
Sbjct: 321 LPNVPEDYVHRIGRTGRAGNDGVAIS 346
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
K +GG + Q + G I+VATPGRL D +N +S + +V DEADRM DM
Sbjct: 104 KTLPVFGGVSSYPQIQALKSGIDIVVATPGRLLDLALQNALSLEHIDTLVFDEADRMFDM 163
Query: 195 GFMPSIEKMM 224
GF+ I++++
Sbjct: 164 GFIHDIKQIV 173
Score = 44.8 bits (101), Expect = 0.003
Identities = 25/86 (29%), Positives = 44/86 (51%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ L+FSAT+P ++ L L + L + + + ++ Q I V + +K L ++
Sbjct: 179 KRQNLLFSATYPSEVMSLCNSMLKDPLRIQIEEQNSTALNIIQRVILVDRDKKMELLNEV 238
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
+ LVF TKR+AD ++ L
Sbjct: 239 FGVESIDQALVFTRTKRSADKCSSYL 264
>UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 598
Score = 93.9 bits (223), Expect = 5e-18
Identities = 43/76 (56%), Positives = 55/76 (72%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HGD+ Q +R+ L F+S K ILVAT VAARGLD+ ++DIV+NYD P I+ YVHRI
Sbjct: 398 SLHGDKAQNQRDFVLGKFRSCKKGILVATDVAARGLDVNDIDIVINYDFPGDIETYVHRI 457
Query: 712 GRTGRVGNRGKAVSFY 759
GRT R G AV+F+
Sbjct: 458 GRTARGNKEGLAVTFF 473
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +3
Query: 9 VLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRML 188
+++ +GG Q +++ ++VATPGRL DF+E + V F+VLDEAD+ML
Sbjct: 226 MIRQTCLFGGAGRGPQANDLRHLPSLVVATPGRLIDFIEGGQCPMNRVNFLVLDEADQML 285
Query: 189 DMGFMPSIEKMMLH 230
DMGF P I K++ H
Sbjct: 286 DMGFEPQIRKIIGH 299
Score = 58.0 bits (134), Expect = 3e-07
Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT+MFSAT+P++IQ LA FL + + + +G +++++Q+ + ++EK + +
Sbjct: 303 DRQTMMFSATWPKEIQQLAADFLVDPVHMIIGNKDLTTNSNIKQVITKCEEFEKLSKCLE 362
Query: 428 LIEENDGKRILVFVETKRNAD 490
++ E+ +I++F +TKR D
Sbjct: 363 VLNEHKDDKIIIFTKTKRTTD 383
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 93.9 bits (223), Expect = 5e-18
Identities = 38/78 (48%), Positives = 59/78 (75%)
Frame = +1
Query: 523 LTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYV 702
+T S+HG + Q +R+E + +FK+G I+ AT+VAARGLD+K + +V+NYD+P +++YV
Sbjct: 753 VTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLDVKQLKLVINYDVPNHMEDYV 812
Query: 703 HRIGRTGRVGNRGKAVSF 756
HR GRTGR G +G ++F
Sbjct: 813 HRAGRTGRAGQKGTCITF 830
Score = 60.5 bits (140), Expect = 5e-08
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERN--RVS-FGSVRFVVLDEADR 182
L+ A YGG + Q + + I+VATPGRL D + N RV+ V ++VLDEADR
Sbjct: 578 LRAACVYGGAPISEQIAEMKKTADIVVATPGRLIDLLTANSGRVTNLYRVTYLVLDEADR 637
Query: 183 MLDMGFMPSIEKMM 224
M DMGF P + K++
Sbjct: 638 MFDMGFEPQVMKIL 651
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNY-LFVAVGIVGGASTDVEQIF---IEVTKYEK-RN 415
+RQT++FSATFP+ ++ LA + L N L + VG + ++EQI E TK+ +
Sbjct: 657 DRQTVLFSATFPKQMESLARKVLKNKPLEITVGGRSVVAAEIEQIVEVRSEDTKFHRLLE 716
Query: 416 SLKQLIEENDGKRILVFVETKRNAD 490
L +L R L+FV+ + AD
Sbjct: 717 ILGELYNREKDARTLIFVDRQEAAD 741
>UniRef50_Q7S5R1 Cluster: ATP-dependent RNA helicase dbp-3; n=10;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp-3 -
Neurospora crassa
Length = 614
Score = 93.9 bits (223), Expect = 5e-18
Identities = 43/85 (50%), Positives = 60/85 (70%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
++ + + +SIHGD Q +R +L+ FKSG +LVAT VAARGLDI V +V+N P
Sbjct: 470 LSRKGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARGLDIPEVKLVINVTFPL 529
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFY 759
+I++YVHRIGRTGR G GKA++ +
Sbjct: 530 TIEDYVHRIGRTGRAGKLGKAITLF 554
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIAR--GCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
L +GG+ Q + + + G I+ ATPGRL DF+ +S +V F VLDEADRM
Sbjct: 286 LSAVCIFGGSDKNEQRNLLYKNNGVDIITATPGRLKDFLSEGSISLANVSFAVLDEADRM 345
Query: 186 LDMGFMPSIEKMM 224
LD GF I+ ++
Sbjct: 346 LDRGFSEDIKLIL 358
Score = 36.3 bits (80), Expect = 0.97
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVG 346
+RQTLMF+AT+P DIQ LA ++ N V +G
Sbjct: 366 QRQTLMFTATWPLDIQKLAESYMINPAQVTIG 397
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 93.5 bits (222), Expect = 6e-18
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+A++ +++HGD Q +RE+AL+ F+SGK +LVAT VAARG+DI V VVNY P+
Sbjct: 349 LAKRGFAAAAVHGDLGQGQREQALRAFRSGKVDVLVATDVAARGIDINGVTHVVNYQCPE 408
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFYD 762
+ Y+HRIGRTGR G G A++F D
Sbjct: 409 DENVYLHRIGRTGRAGESGVAITFVD 434
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+V YGG A Q + G I+V TPGRL D ++ + V +VLDEAD MLD
Sbjct: 186 LRVLSVYGGRAYEPQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLD 245
Query: 192 MGFMPSIEKMMLH-PTMVET 248
+GF+P +E++M PT +T
Sbjct: 246 LGFLPDVERIMSQLPTERQT 265
Score = 39.5 bits (88), Expect = 0.10
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAV--GIVGGASTDVEQIFIEVTKYEKRNSLK 424
ERQT++FSAT P + LA RF+ + V G Q +K L
Sbjct: 262 ERQTMLFSATMPGPVISLARRFMKRPVHVRAEQPDEGRTVPTTRQHVFRAHALDKMEVLA 321
Query: 425 QLIEENDGKRILVFVETKRNADFIA 499
++++ +VFV T+R AD +A
Sbjct: 322 RVLQAGGRGLAMVFVRTRRTADKVA 346
>UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=1;
Leptospirillum sp. Group II UBA|Rep: Superfamily II DNA
and RNA helicase - Leptospirillum sp. Group II UBA
Length = 444
Score = 93.5 bits (222), Expect = 6e-18
Identities = 41/78 (52%), Positives = 56/78 (71%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
+ ++HGD+ Q R L F+ G +LVAT VAARGLDI + V+NYDLP++ ++YVH
Sbjct: 272 SDALHGDKSQPVRNRVLSRFRRGDLKVLVATDVAARGLDIDGITHVINYDLPQTAEDYVH 331
Query: 706 RIGRTGRVGNRGKAVSFY 759
RIGRTGR G G+A+SF+
Sbjct: 332 RIGRTGRAGRTGRALSFF 349
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG Q N+ R I+VATPGRL D V RN ++ + V++DEADRMLDMGF+P I
Sbjct: 108 GGVDFIRQERNLKRNWDIVVATPGRLLDHVRRNNLTLANTSLVIIDEADRMLDMGFLPDI 167
Query: 213 EKMM 224
++
Sbjct: 168 NTIV 171
Score = 49.6 bits (113), Expect = 1e-04
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTK-YEKRNSLKQL 430
RQ+L+FSAT P IQ LA F N+ + V V S + Q +I V+ +K LK++
Sbjct: 178 RQSLLFSATCPPRIQELAATFQNDAVIVRVEPERKGSDHIHQEWITVSHGSQKLGLLKKV 237
Query: 431 IEENDGK--RILVFVETKRNADFIAAMLRNS 517
++E + ++++F TKR+A+ ++ L ++
Sbjct: 238 LDEGKSETGQVIIFTRTKRSAEDLSIALNDA 268
>UniRef50_Q7QTB0 Cluster: GLP_15_15676_17025; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_15_15676_17025 - Giardia lamblia
ATCC 50803
Length = 449
Score = 93.5 bits (222), Expect = 6e-18
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
L +HGD QRER+ L++FK GK +LVAT VA RG+DI + V+N+D PK ID Y
Sbjct: 260 LRVCEMHGDLEQRERQNNLKSFKDGKTPVLVATDVAQRGIDIGAIRHVINFDFPKDIDTY 319
Query: 700 VHRIGRTGRVGNRGKAVSF 756
+HRIGRTGR G G A SF
Sbjct: 320 IHRIGRTGRAGAEGLATSF 338
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/71 (52%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V + YGG R Q + +GC I++ATPGRL DF+ER +S VR +VLDEAD+MLD
Sbjct: 76 LIVRLVYGGEGAREQRGLLKKGCDIVIATPGRLKDFLERRCLSLKYVRVMVLDEADKMLD 135
Query: 192 MGFMPSIEKMM 224
MGF P I ++
Sbjct: 136 MGFEPQIRDLV 146
Score = 50.8 bits (116), Expect = 4e-05
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Frame = +2
Query: 215 KNDVTSNHGGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIF--- 385
K D+ N G + RQTLMFSATF +Q +A R+L+N + VG +G +T ++Q F
Sbjct: 148 KFDMPGN-GPNGNRQTLMFSATFGTGVQAMAKRYLHNEARIHVGQIGSTTTMIKQQFEYF 206
Query: 386 --IEVTKYEKRNSLKQLIEENDGK------RILVFVETKRNADFIAAMLRNS 517
+ +KR I ++ G L+FVETK++ +I L N+
Sbjct: 207 AETAIKSVDKRIDKLIHILKSPGSIPTASFLTLIFVETKKDIGYIITKLLNA 258
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 93.5 bits (222), Expect = 6e-18
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIK-NVDIVVNYDLPKS 687
E++ +IHGD Q ER+ + NFKSGK ILVAT + RG+ I N+ V+NYD P S
Sbjct: 604 ERKYKCGAIHGDMKQFERDSVIDNFKSGKISILVATDILGRGIHIGGNLRFVINYDFPSS 663
Query: 688 IDEYVHRIGRTGRVGNRGKAVSFY 759
+++YVHR+GRTGR GN+G A++ +
Sbjct: 664 LEQYVHRVGRTGRQGNKGHALTLF 687
Score = 52.0 bits (119), Expect = 2e-05
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCH-ILVATPGRLHDFVERNRVS---FGSVRFVVLDEADRMLDMG 197
YGG Q D + + + I++ATPGRL D ++R++ G V ++LDEADRML +G
Sbjct: 421 YGGVDANEQKDILGQEHNEIIIATPGRLVDLIQRSKEVVGLLGGVGMLILDEADRMLQLG 480
Query: 198 FMPSIEKM 221
F ++K+
Sbjct: 481 FGDQLQKI 488
Score = 39.9 bits (89), Expect = 0.079
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAV-------GIVGGASTDVEQIFIEVTKYEK 409
+RQTLMFSATFP+ +Q A ++L N L + V G S +V+Q+ + + EK
Sbjct: 495 DRQTLMFSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSIISKNVKQVVKPIAEKEK 554
Query: 410 RNSLKQLIEENDGKRILV 463
L I K +L+
Sbjct: 555 SKYLTTFINSIMKKELLL 572
>UniRef50_Q09775 Cluster: ATP-dependent RNA helicase rok1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase rok1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 481
Score = 93.5 bits (222), Expect = 6e-18
Identities = 39/75 (52%), Positives = 56/75 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHG+ Q +REEAL F+ G+ +L+AT + ARG+D V +V+N+D P+S+ Y+HRIG
Sbjct: 318 IHGELPQAKREEALAKFRKGEIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIG 377
Query: 715 RTGRVGNRGKAVSFY 759
RTGR GN G+AV+F+
Sbjct: 378 RTGRAGNTGQAVTFF 392
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 3 GSVLKVA-VAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEAD 179
G+ LK+ ++ ++ + + + + TP RL ++ +SF V F V+DEAD
Sbjct: 141 GTSLKIIELSKSNEKIQEKAPKLREKYDMCIGTPMRLVQAIQTG-LSFEKVEFFVMDEAD 199
Query: 180 RMLDMGFMPSIEKMM 224
R+ + GF+ + ++
Sbjct: 200 RLFEPGFIEQTDHIL 214
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 93.5 bits (222), Expect = 6e-18
Identities = 45/100 (45%), Positives = 63/100 (63%)
Frame = +1
Query: 457 LGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARG 636
L C NK ++ + + +IHG + Q ERE A++ FK+GK +LVAT VA++G
Sbjct: 437 LVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKNGKKDVLVATDVASKG 496
Query: 637 LDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
LD ++ V+NYD+P I+ YVHRIGRTGR G G A +F
Sbjct: 497 LDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 536
Score = 66.5 bits (155), Expect = 8e-10
Identities = 28/73 (38%), Positives = 48/73 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ + GG +R Q D + +G HI+VATPGRL D + + +++ + R++ LDEADR++D
Sbjct: 293 IRPLLCIGGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 352
Query: 192 MGFMPSIEKMMLH 230
+GF I ++ H
Sbjct: 353 LGFEDDIREVFDH 365
Score = 47.6 bits (108), Expect = 4e-04
Identities = 31/82 (37%), Positives = 43/82 (52%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSAT P+ IQ+ A L + V VG G A+ DV Q +E K + R
Sbjct: 369 QRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQ-EVEYVKEDARIIYLLE 427
Query: 431 IEENDGKRILVFVETKRNADFI 496
+ +LVF E K + D+I
Sbjct: 428 CLQKTPPPVLVFCENKADVDYI 449
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 93.1 bits (221), Expect = 8e-18
Identities = 43/74 (58%), Positives = 54/74 (72%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG++ Q R AL+ F GK +LVAT VAARGLDI+ ++ VVNYDLP ++YVHRIG
Sbjct: 274 VHGEKAQGSRRRALREFIEGKVRVLVATEVAARGLDIQGLEYVVNYDLPFLAEDYVHRIG 333
Query: 715 RTGRVGNRGKAVSF 756
RTGR G G A+SF
Sbjct: 334 RTGRAGKTGVAISF 347
Score = 69.3 bits (162), Expect = 1e-10
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ V YGG + Q + +G I+VATPGRL + + +S +V F+VLDEADRMLD
Sbjct: 103 ISVLTIYGGMKMATQAQKLKQGADIIVATPGRLLEHIVACNLSLSNVEFLVLDEADRMLD 162
Query: 192 MGFMPSIEKMM 224
MGF I+K++
Sbjct: 163 MGFSTDIQKIL 173
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ L+FSATF ++ LA L+ ++ + V Q+ V + KR L +L
Sbjct: 179 KRQNLLFSATFSTAVKKLANDMLDKPKIISADKQNTTAATVSQVVYPVEQRRKRELLSEL 238
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
I + +++LVF T+ +AD + L
Sbjct: 239 IGTKNWQQVLVFTATRADADKLVTEL 264
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 93.1 bits (221), Expect = 8e-18
Identities = 42/96 (43%), Positives = 63/96 (65%)
Frame = +1
Query: 469 RNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIK 648
R KT + ++ + +I+GD Q +RE + ++K GK IL+AT +AARGLD++
Sbjct: 260 RTKTLTTELTEKLSARGFSADAINGDIQQNQRERIINDYKQGKIDILIATDIAARGLDVE 319
Query: 649 NVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+ VVNYD+P+ + YVHRIGRTGR G +G+A+ F
Sbjct: 320 RISHVVNYDIPQDAESYVHRIGRTGRAGRKGEAILF 355
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/65 (41%), Positives = 40/65 (61%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG + Q + RG H +V TPGR+ D +E+ + +++ VLDEAD ML MGF+
Sbjct: 116 YGGQSYDIQLRPLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDD 175
Query: 210 IEKMM 224
I+ +M
Sbjct: 176 IKWIM 180
Score = 36.7 bits (81), Expect = 0.73
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKY-EKRNSLKQ 427
+RQ +FSAT P I+ +A +FLN + + +T + Q + V K +L +
Sbjct: 186 QRQIALFSATMPNVIKKIAKQFLNQPKIIKIKTKTETATTITQKYCMVGGLSNKLEALTR 245
Query: 428 LIEENDGKRILVFVETK 478
++E +++FV TK
Sbjct: 246 ILEVTVFDAMIIFVRTK 262
>UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3;
Ostreococcus|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1025
Score = 93.1 bits (221), Expect = 8e-18
Identities = 41/77 (53%), Positives = 57/77 (74%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HGD+ Q +RE +L+ F K +++AT VAARGLDIK V V+NYD+ + ++ YVHRI
Sbjct: 326 SVHGDKSQADREASLRKFIDNKCPLMMATDVAARGLDIKGVTHVINYDMARDVESYVHRI 385
Query: 712 GRTGRVGNRGKAVSFYD 762
GRTGR G G AV+F++
Sbjct: 386 GRTGRAGELGAAVTFWN 402
Score = 53.2 bits (122), Expect = 8e-06
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Frame = +3
Query: 24 VAYGGTAVRHQGDNIA--RGCHILVATPGRLHDFVERNRV-SFGSVRFVVLDEADRMLDM 194
V YGG + Q + + + C I++ TPGRL D + + V S + +VLDEADRMLDM
Sbjct: 148 VVYGGASAYEQKNALRSKKPC-IVIGTPGRLTDLMSQEGVLSLEKLSVIVLDEADRMLDM 206
Query: 195 GFMPSIE 215
GF P I+
Sbjct: 207 GFEPQIK 213
Score = 51.2 bits (117), Expect = 3e-05
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLN------NYLFVAVGIVGG---ASTDVEQIFIEVTKYE 406
RQTL+FSAT+P+ ++ LA +LN +F+ G G A+ + Q F+E +E
Sbjct: 223 RQTLLFSATWPKSVRKLAACYLNQDKSRVREVFIGEGAQDGELAANKAITQRFVEARDHE 282
Query: 407 KRNSLKQLI-EENDGKRILVFVETKRNADFIA 499
K L LI E D R+++F TKR + +A
Sbjct: 283 KDEHLYNLICELPDDSRVVIFANTKRRVENLA 314
>UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 440
Score = 93.1 bits (221), Expect = 8e-18
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD Q +RE+++ FK G IL+AT VAARGLDIK V+ V+NY P + ++YVHRIG
Sbjct: 306 IHGDMSQHDREKSVDAFKKGTSRILIATDVAARGLDIKEVEYVINYTFPLTTEDYVHRIG 365
Query: 715 RTGRVGNRGKAVSFYDL 765
RTGR G G A +F+ L
Sbjct: 366 RTGRAGATGLAHTFFTL 382
Score = 60.1 bits (139), Expect = 7e-08
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARG--CHILVATPGRLHDFVERNRVSFGSVRFVVLDEAD 179
S ++ YGG Q + G ++VATPGRL DF+E + V +VLDEAD
Sbjct: 126 SGVRCVCVYGGAPKYEQKAQMKAGGGAAVIVATPGRLRDFMEEGVIKLDRVTMLVLDEAD 185
Query: 180 RMLDMGFMPSI 212
RMLD+GF P I
Sbjct: 186 RMLDLGFEPEI 196
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT+MFSAT+P+ +Q LA F+ N + V +G G AS + QI V +K L +
Sbjct: 206 DRQTVMFSATWPQSVQSLASEFMCNPIKVRIGAEGLKASQSITQIVEVVEPQDKDRHLAR 265
Query: 428 LIEENDGK 451
++++ GK
Sbjct: 266 VMKQYLGK 273
>UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 1151
Score = 93.1 bits (221), Expect = 8e-18
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHG + Q +R+ + +FK+G I++AT+VAARGLD+K + +VVN+D P +++YVHR
Sbjct: 833 SIHGGKDQVDRDSTIDDFKAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRA 892
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR GN G AV+F
Sbjct: 893 GRTGRAGNTGTAVTF 907
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERN--RVS-FGSVRFVVLDEADR 182
L+ AYGG ++ Q ++ RG I+V TPGR+ + + N RV+ V +VVLDEADR
Sbjct: 656 LRAVCAYGGAIIKDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADR 715
Query: 183 MLDMGFMPSIEKM 221
M DMGF P + K+
Sbjct: 716 MFDMGFEPQVMKV 728
Score = 39.9 bits (89), Expect = 0.079
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVG---IVGGASTDVEQIFIEVTKYEK-RNSL 421
RQT++FSAT P + LA + L + + + VG +V T + ++ E K+ + L
Sbjct: 736 RQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRLLELL 795
Query: 422 KQLIEENDGKRILVFVETKRNAD 490
+L ++ R L+FV+ + AD
Sbjct: 796 GELYNTDEDARTLIFVDRQEKAD 818
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 93.1 bits (221), Expect = 8e-18
Identities = 46/101 (45%), Positives = 59/101 (58%)
Frame = +1
Query: 454 NLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAAR 633
+L C K SH+ + L +HGD Q +R+ + FK G ILVAT VAAR
Sbjct: 246 SLVFCNTKRKVDKLVSHLQIRGYLADGLHGDLTQNQRDRVMSKFKKGNIEILVATDVAAR 305
Query: 634 GLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
G+D+ V+ V N+D+P + YVHRIGRTGR G GKA SF
Sbjct: 306 GIDVGGVEAVFNFDIPNDNEYYVHRIGRTGRAGKTGKAYSF 346
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ V YGG + Q + +G I++ TPGR+ D ++R +S +++ V+LDEAD MLD
Sbjct: 102 IDVLPVYGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLD 161
Query: 192 MGFMPSIEKMM 224
MGF IE ++
Sbjct: 162 MGFREDIEYIL 172
Score = 56.0 bits (129), Expect = 1e-06
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +2
Query: 248 HERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
+ERQ L+FSAT P++I LA R+ N V V + DVEQ + EV + K L +
Sbjct: 177 YERQFLLFSATLPQEILQLAQRYQTNPEIVKVTKHELTTPDVEQKYFEVKEDMKLELLSR 236
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLR 511
L++ +D LVF TKR D + + L+
Sbjct: 237 LLDLHDFDLSLVFCNTKRKVDKLVSHLQ 264
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 93.1 bits (221), Expect = 8e-18
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +1
Query: 499 SHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDL 678
S+ + ++HGD Q +RE L F+ G ILVAT VAARGLD+ NVD++++Y+L
Sbjct: 366 SYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYEL 425
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSFY 759
P + + +VHR GRTGR G +G A+ Y
Sbjct: 426 PNNTETFVHRTGRTGRAGKKGSAILIY 452
Score = 60.5 bits (140), Expect = 5e-08
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGGT + Q + G + V TPGR+ D ++R ++ V+FVVLDEAD+ML +GF
Sbjct: 211 YGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAED 270
Query: 210 IE 215
+E
Sbjct: 271 VE 272
Score = 48.0 bits (109), Expect = 3e-04
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGA----STDVEQIFIEVTKYEKRNS 418
+RQ++MFSAT P I+ L ++LNN L V +VG + + + I Y + +
Sbjct: 281 KRQSMMFSATMPSWIRSLTKKYLNNPL--TVDLVGDSDQKLADGITTYSIIADSYGRASI 338
Query: 419 LKQLIEEN-DGKRILVFVETKRNADFIA-AMLRNSNCSHL 532
+ L+ E+ G + +VF +TKR+AD ++ A+ R+ C L
Sbjct: 339 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEAL 378
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 93.1 bits (221), Expect = 8e-18
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD Q R +AL +FKSGK +LVAT VAARGLDI V +V+N P +I++YVHRIG
Sbjct: 446 IHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIG 505
Query: 715 RTGRVGNRGKAVSFY 759
RTGR +G A++F+
Sbjct: 506 RTGRANTKGTAITFF 520
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/76 (39%), Positives = 41/76 (53%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ LK V YGG Q A+ +++ TPGRL D + + V ++VLDEADR
Sbjct: 262 GTNLKAVVVYGGAPKSEQA-RAAKNASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADR 320
Query: 183 MLDMGFMPSIEKMMLH 230
MLD GF I ++ H
Sbjct: 321 MLDTGFEQDIRNIISH 336
Score = 38.3 bits (85), Expect = 0.24
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEV--TKYEKRNSLK 424
RQT+ FSAT+PE ++ LA FL + + + +G AS ++ QI +E+ K L
Sbjct: 346 RQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQI-VEILDDPRSKERMLD 404
Query: 425 QLIEE---NDGK--RILVFVETKRNA 487
L+ + + GK +IL+FV K+ A
Sbjct: 405 NLLRKHLSSGGKDDKILIFVLYKKEA 430
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 92.7 bits (220), Expect = 1e-17
Identities = 42/75 (56%), Positives = 54/75 (72%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHGD QR+RE + +F+ H I+VAT VAARGLDI + V+NYDLP ++Y+HRI
Sbjct: 267 AIHGDLSQRQRERVILSFRKSNHRIMVATDVAARGLDIPHTQHVINYDLPMCPEDYLHRI 326
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G A+SF
Sbjct: 327 GRTGRAGATGHALSF 341
Score = 69.7 bits (163), Expect = 8e-11
Identities = 40/112 (35%), Positives = 71/112 (63%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ LMFSAT P+ I ++ ++LNN + + VG A+ +++Q + V+ EK ++L +
Sbjct: 174 KRQVLMFSATMPKHIIAVSQKYLNNPVRITVGATNKAAAEIKQESMHVSDKEKFSALTKQ 233
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+ +G +++FV+TKR+AD +A ML+ N H AI ++S R+R R++
Sbjct: 234 LGNREGS-VIIFVKTKRSADQLAKMLKYEN--HTA-EAIHGDLSQRQRERVI 281
Score = 50.0 bits (114), Expect = 7e-05
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = +3
Query: 21 AVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGF 200
AV GG + Q + + +++ TPGR+ D + R + + VLDE DRMLDMG
Sbjct: 101 AVLIGGEPMPKQFIQLKKNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGM 160
Query: 201 MPSIEKM 221
+E++
Sbjct: 161 KEQLEEI 167
>UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 540
Score = 92.7 bits (220), Expect = 1e-17
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+ I + Q++R L++FKSGK+ +VAT VA+RG+D++N+DIV NYDLP+ + YVHR
Sbjct: 270 TGISSELDQKKRLRLLRDFKSGKYRYMVATDVASRGIDVENIDIVYNYDLPQDTENYVHR 329
Query: 709 IGRTGRVGNRGKAVSF 756
IGRT R G +GKA+ F
Sbjct: 330 IGRTARAGRKGKAIGF 345
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GGT + Q ++ I+VATPGRL D ++ + +V F VLDEADRMLDMGF+ I
Sbjct: 107 GGTDYKSQNKDLEGLNGIIVATPGRLIDMIKSGSIDISNVEFFVLDEADRMLDMGFIQDI 166
Query: 213 EKMMLH 230
+ +LH
Sbjct: 167 -RWLLH 171
Score = 44.4 bits (100), Expect = 0.004
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 236 HGGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRN 415
H + +QTL++SAT ++ LA RFLN + + + + ++Q + + + EK
Sbjct: 171 HKCKNRKQTLLYSATLSVEVMRLAYRFLNEPVEIQINPEKIITERIDQKIVHLGREEKIP 230
Query: 416 SLKQLI--EENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILR 589
+ LI + +G+ I +F K N I LR + T I+ + +KR R+LR
Sbjct: 231 YMTNLIINSKEEGQGI-IFTNYKANIPKIVYTLRKYG---VPVTGISSELDQKKRLRLLR 286
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 92.7 bits (220), Expect = 1e-17
Identities = 47/103 (45%), Positives = 67/103 (65%)
Frame = +1
Query: 445 W*KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAV 624
W + L R K + + + ++ ++IHG++ Q R +AL +FKSG+ +LVAT +
Sbjct: 243 WQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDI 302
Query: 625 AARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
AARGLDI + VVN+DLP ++YVHRIGRTGR G G+AVS
Sbjct: 303 AARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGASGQAVS 345
Score = 75.8 bits (178), Expect = 1e-12
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ AV +GG + Q + G +LVATPGRL D V++N V F + +VLDEADRMLD
Sbjct: 102 LRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLD 161
Query: 192 MGFMPSIEKMM 224
MGF+ I+K++
Sbjct: 162 MGFIRDIKKIL 172
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ LMFSATF ++I+ LA +N + ++V A+ V+Q V K +K L QL
Sbjct: 178 KRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQL 237
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCS 526
I++ D +++LVF TK A+ +A L + S
Sbjct: 238 IKQEDWQQVLVFSRTKHGANRLAKSLIQAEIS 269
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
+ ++IHG++ Q R++AL +FK+GK LVAT +AARGLDI+ + V NY+LP+ + Y
Sbjct: 267 ITAAAIHGNKSQTARQQALADFKAGKVRCLVATDIAARGLDIEELSHVFNYNLPEVPETY 326
Query: 700 VHRIGRTGRVGNRGKAVSFYD 762
VHRIGRTGR G G AVSF D
Sbjct: 327 VHRIGRTGRAGRGGTAVSFCD 347
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ AV +GG + Q D + +G ILVATPGRL D + V + VLDEADRMLD
Sbjct: 101 LRSAVIFGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLD 160
Query: 192 MGFMPSIEKMM-LHPTMVET 248
MGF+ + +++ L P + +T
Sbjct: 161 MGFLHDVRRVLKLLPAVKQT 180
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/85 (36%), Positives = 41/85 (48%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
+QTL FSAT P ++ L L N + VAV V ++Q V K K L L+
Sbjct: 178 KQTLFFSATMPPEVMDLVNGLLKNPVKVAVDPVSSPVEIIDQSVYLVDKGNKTKLLAWLV 237
Query: 434 EENDGKRILVFVETKRNADFIAAML 508
E D K +VF TK A+ +A L
Sbjct: 238 EGLDVKNAIVFTRTKHGANKVAGDL 262
>UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1;
Dugesia japonica|Rep: Putative RNA helicase protein -
Dugesia japonica (Planarian)
Length = 515
Score = 92.7 bits (220), Expect = 1e-17
Identities = 39/104 (37%), Positives = 66/104 (63%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K + C K + ++ + + +HGD QR+R+ FK+ + ILVAT+VAA
Sbjct: 356 KTIVFCNKKMDVDIFYRFSTKKNITIAKLHGDLTQRQRDYEFDLFKNNRTQILVATSVAA 415
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
RG+D+ +++ V+N LP ++D+Y+HR+GR GR+G GK+++F D
Sbjct: 416 RGIDVSDIECVINLGLPVNLDDYIHRVGRCGRMGRPGKSITFVD 459
Score = 70.1 bits (164), Expect = 6e-11
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ GG R Q ++ +RGCH L+ATPGRL D +R S +V+DEADRMLD
Sbjct: 206 LRSVSVIGGVDARSQINDASRGCHALIATPGRLKDLTDRGIFSLKYCNKLVIDEADRMLD 265
Query: 192 MGFMPSIEKMM 224
MGF P I +++
Sbjct: 266 MGFEPQIREII 276
Score = 37.9 bits (84), Expect = 0.32
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Frame = +2
Query: 221 DVTSNHGGDHERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGAS-----TDVEQI 382
++ +N +R T MFSATFP+ + LA + + N+ + VG G + +EQ
Sbjct: 274 EIINNLPSVSKRHTSMFSATFPKSVMSLASKLMKPNFGEITVGKNSGTNEACIPDSIEQE 333
Query: 383 FIEVTKYEK--RNSLKQLIEENDGKRILVFVETKRNAD 490
FI +T+ + RN L +N+ K+ +VF K + D
Sbjct: 334 FI-LTESDSIFRNCFDFL--QNNNKKTIVFCNKKMDVD 368
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 92.7 bits (220), Expect = 1e-17
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
+ T ++HGD Q +RE L F+ GK +LVAT VA+RGLDI NVD+V++Y+LP + +
Sbjct: 375 IATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETF 434
Query: 700 VHRIGRTGRVGNRGKAV 750
VHR GRTGR G G A+
Sbjct: 435 VHRSGRTGRAGKEGSAI 451
Score = 62.5 bits (145), Expect = 1e-08
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L YGG + Q + RG ++V TPGR+ D +E + G V ++VLDEAD+ML
Sbjct: 207 LSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLA 266
Query: 192 MGFMPSIEKMM 224
+GF ++E ++
Sbjct: 267 VGFEEAVESIL 277
Score = 47.6 bits (108), Expect = 4e-04
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGG----ASTDVEQIFIEVTKYEKRNS 418
+RQ+++FSAT P ++ LA ++L+N L + +VG + ++ I T KR
Sbjct: 283 KRQSMLFSATMPTWVKKLARKYLDNPL--NIDLVGDQDEKLAEGIKLYAIATTSTSKRTI 340
Query: 419 LKQLIE-ENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
L LI G + +VF +TKR+AD ++ L NS + A+ ++S +R R L
Sbjct: 341 LSDLITVYAKGGKTIVFTQTKRDADEVSLALSNS----IATEALHGDISQHQRERTL 393
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
L ++I+GD Q +RE + K GK ILVAT VAARGLD++ + V+NYD+P ++ Y
Sbjct: 279 LTAAAINGDMQQAQRERTIHQLKDGKLDILVATDVAARGLDVERISHVLNYDIPYDVESY 338
Query: 700 VHRIGRTGRVGNRGKAVSF 756
VHRIGRTGR G G+A+ F
Sbjct: 339 VHRIGRTGRAGRSGEAILF 357
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/73 (39%), Positives = 45/73 (61%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S +V YGG + Q + RG H++V TPGR+ D +ER + ++ +VLDEAD M
Sbjct: 111 SGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEM 170
Query: 186 LDMGFMPSIEKMM 224
L MGF+ +E+++
Sbjct: 171 LRMGFIEDVEEVL 183
Score = 42.3 bits (95), Expect = 0.015
Identities = 22/86 (25%), Positives = 45/86 (52%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQ +FSAT P I+ +A +L + + V + + ++ Q + V+ K ++L +++
Sbjct: 190 RQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLHKLDALTRIL 249
Query: 434 EENDGKRILVFVETKRNADFIAAMLR 511
E +++FV TK + +A L+
Sbjct: 250 EVETFDAMIIFVRTKAATEELAEKLQ 275
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HGD Q++R++ + F+ G ILVAT VA RG+D+ NV+ V NYDLP+ ++YVHRI
Sbjct: 277 ALHGDLNQKQRDKVMSGFRKGSIEILVATDVAGRGIDVNNVEAVFNYDLPRDGEDYVHRI 336
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G +G A SF
Sbjct: 337 GRTGRAGKKGIAFSF 351
Score = 60.1 bits (139), Expect = 7e-08
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
+V YGG + Q + + I++ATPGR+ D + R + ++ VVLDEAD MLDM
Sbjct: 108 EVVPIYGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDM 167
Query: 195 GFMPSIE 215
GF +E
Sbjct: 168 GFREDME 174
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT+MFSAT +D+ L +F N+ + V ++ +EQI+ E+ + K +L +L
Sbjct: 183 DRQTIMFSATMTDDVLTLMKKFQNHPQIIDVTHQKLSAPKIEQIYYEIQENAKGEALARL 242
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRN 514
IE + K LVF TK D + +L++
Sbjct: 243 IEYRNVKLALVFCNTKAQVDTVVELLKS 270
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
+S++HGD Q+ER AL++F G+ IL+AT +AARG+DI ++ V+NYDLP++ +YVH
Sbjct: 272 SSTLHGDLTQKERLGALEDFSKGRCKILIATDLAARGIDIPSLPCVLNYDLPRATSDYVH 331
Query: 706 RIGRTGRVGNRGKAVSFYD 762
R GRT R G G A+SF D
Sbjct: 332 RAGRTARAGEAGLAISFVD 350
Score = 70.9 bits (166), Expect = 4e-11
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ YGG A+ Q ++++GC I+VATPGRL D + +N + ++ +VLDEADRMLD
Sbjct: 104 IRSVAIYGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLD 163
Query: 192 MGFMPSIEKMM 224
+GF ++ ++
Sbjct: 164 LGFADELDDIL 174
Score = 53.2 bits (122), Expect = 8e-06
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
QTL+FSATFP+ ++ L L N + ++V + Q IEV + + LK LI+
Sbjct: 182 QTLLFSATFPDKVKELTEELLRNPVEISVKQEATLPDQLHQRAIEVDRNNRTMLLKHLIK 241
Query: 437 ENDGKRILVFVETKRNADFIAAMLRNS 517
+ +++L+FV +KR A+ I L S
Sbjct: 242 QEKWQQLLIFVGSKRTANNIELKLYRS 268
>UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2;
Desulfitobacterium hafniense|Rep: DEAD/DEAH box
helicase-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 425
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/77 (55%), Positives = 57/77 (74%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHG++ Q RE+AL FK K ILVAT +AARGLDI+ + V+NY+LP+ + Y+HRI
Sbjct: 274 AIHGNKSQANREQALHAFKKRKTRILVATDIAARGLDIQELSHVINYNLPEVPETYIHRI 333
Query: 712 GRTGRVGNRGKAVSFYD 762
GRTGR G GKA++F D
Sbjct: 334 GRTGRAGLGGKAITFCD 350
Score = 59.7 bits (138), Expect = 9e-08
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ V +GG Q + +G ILVATPGRL D + + + V VLDE D+MLD
Sbjct: 104 LRTLVIFGGVGQAPQTRKLEKGIDILVATPGRLLDLINQGFIDLSHVEHFVLDETDQMLD 163
Query: 192 MGFMPSIEKMMLH 230
MG + +++++ +
Sbjct: 164 MGMLHDVKRIITY 176
Score = 45.6 bits (103), Expect = 0.002
Identities = 33/100 (33%), Positives = 46/100 (46%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQ ++FSAT P +I+ LA L + +A+ +EQ V K K L
Sbjct: 180 ERQNMLFSATMPVEIEKLADTILKGPVKIAMTPEFSPLDIIEQEVYFVDKANKAALLTYW 239
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIA 550
++ N+ +LVF TK AD I L FTA+A
Sbjct: 240 LKNNEYDSVLVFSRTKHGADKIVKELNKKG-----FTAVA 274
>UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1;
Clostridium cellulolyticum H10|Rep: DEAD/DEAH box
helicase-like - Clostridium cellulolyticum H10
Length = 542
Score = 92.3 bits (219), Expect = 1e-17
Identities = 44/96 (45%), Positives = 61/96 (63%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C K S + ++ + ++HGD Q +R +Q FK GK ILVAT VAARG+ I
Sbjct: 248 CNTKAAVDRVQSFLGKKGYSSRALHGDIPQSKRLNTIQQFKQGKFHILVATDVAARGIHI 307
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+++ +V+NYD+P D YVHRIGRTGR G+ G+A S
Sbjct: 308 EDLSLVINYDVPNDKDNYVHRIGRTGRAGHEGRAFS 343
Score = 59.7 bits (138), Expect = 9e-08
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
K YG + + + +G I+ TPGR+ D + +S ++RF+VLDEADRMLDM
Sbjct: 101 KTTAIYGQHNINLETQILNKGVSIVTGTPGRVFDHISHGTLSTKNIRFLVLDEADRMLDM 160
Query: 195 GFMPSIEKMM 224
GF+ + +++
Sbjct: 161 GFLDQVVRIV 170
Score = 48.8 bits (111), Expect = 2e-04
Identities = 24/86 (27%), Positives = 43/86 (50%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ER TL+FSAT P +I ++ R++NN + + + + Q++ V EK L +L
Sbjct: 176 ERITLLFSATMPPEIHNICKRYMNNPVTIEIESQTKTVDTIHQVYYRVNYNEKNTQLNRL 235
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
+ + ++F TK D + + L
Sbjct: 236 LIVEKPESCMIFCNTKAAVDRVQSFL 261
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 92.3 bits (219), Expect = 1e-17
Identities = 47/103 (45%), Positives = 67/103 (65%)
Frame = +1
Query: 445 W*KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAV 624
W + L R K + + + ++ ++IHG++ Q R +AL +FKSG+ +LVAT +
Sbjct: 243 WQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDI 302
Query: 625 AARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
AARGLDI + VVN+DLP ++YVHRIGRTGR G G+AVS
Sbjct: 303 AARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGALGQAVS 345
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ AV +GG + Q + G +LVATPGRL D ++ V F + +VLDEADRMLD
Sbjct: 102 LRSAVVFGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLD 161
Query: 192 MGFMPSIEKMM 224
MGF+ I+K++
Sbjct: 162 MGFIRDIKKIL 172
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/92 (36%), Positives = 53/92 (57%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ LMFSATF ++I+ LA +N + ++V A+ V+Q V K +K L QL
Sbjct: 178 KRQNLMFSATFSDEIRELAKGLVNQPVEISVTPRNAAANTVKQWICPVDKNQKSALLIQL 237
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCS 526
I++ D +++LVF TK A+ +A L + S
Sbjct: 238 IKQEDWQQVLVFSRTKHGANRLAKSLIQAEIS 269
>UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2;
Theileria|Rep: RNA helicase, putative - Theileria
annulata
Length = 620
Score = 92.3 bits (219), Expect = 1e-17
Identities = 41/99 (41%), Positives = 64/99 (64%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C NK + + ++ + + S+IHG Q ER E++ +FK+ K +L+ T VA++GLD
Sbjct: 447 CENKADVEIINEYLILKGVEVSAIHGGLSQEERMESISDFKNHKKDVLIGTDVASKGLDF 506
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
++ V+N+DLP+ ++ YVHRIGRTGR G RG A + D
Sbjct: 507 PSIHHVINFDLPRDVENYVHRIGRTGRRGERGLATTLLD 545
Score = 58.0 bits (134), Expect = 3e-07
Identities = 27/76 (35%), Positives = 42/76 (55%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G L + GGT ++ Q I G H+++ATPGRL+ F+ ++ R++ DEADR
Sbjct: 297 GPKLYCSCVIGGTDIKDQEFTIKSGVHMVIATPGRLNYFLNSRIINLTQCRYLCFDEADR 356
Query: 183 MLDMGFMPSIEKMMLH 230
+D+GF I + H
Sbjct: 357 TIDLGFDTEINGIFNH 372
Score = 50.0 bits (114), Expect = 7e-05
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +2
Query: 245 DHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLK 424
+++ QTL+FSAT IQ A L N + V VG+ G + +V+Q+ I V K K L
Sbjct: 374 NNQHQTLLFSATMSIKIQEFAKSALTNPILVNVGLPGSPNKNVKQLLILVPKESKLPMLL 433
Query: 425 QLIEENDGKRILVFVETKRNADFI 496
Q +++ +L+F E K + + I
Sbjct: 434 QCLKKTP-PPVLIFCENKADVEII 456
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 92.3 bits (219), Expect = 1e-17
Identities = 39/76 (51%), Positives = 57/76 (75%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHGD+ Q ER+ L+ F+SGK ILVAT VAARGLD+ + V+N+D P++ ++Y+HRI
Sbjct: 559 AIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRI 618
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR +G + +F+
Sbjct: 619 GRTGRSNTKGTSFAFF 634
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S ++ +GG Q ++ RGC I++ATPGRL DF+ + ++VLDEADRM
Sbjct: 381 SYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRM 440
Query: 186 LDMGFMPSIEKMM 224
LDMGF P I K++
Sbjct: 441 LDMGFEPQIRKIV 453
Score = 61.3 bits (142), Expect = 3e-08
Identities = 34/95 (35%), Positives = 58/95 (61%), Gaps = 7/95 (7%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQTLM+SAT+P++++ LA FL NY+ + +G + A+ ++ Q+ ++ K LK
Sbjct: 459 DRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKT 518
Query: 428 LI------EENDGKRILVFVETKRNADFIAAMLRN 514
L+ E+ GK I++FVETKR D + +R+
Sbjct: 519 LLSDIYDTSESPGK-IIIFVETKRRVDNLVRFIRS 552
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SIHG++ Q ER +L FK G +LVAT VAARGLDI +V++V+NY P + ++YVHRI
Sbjct: 395 SIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRI 454
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G +G A +F+
Sbjct: 455 GRTGRAGKKGVAHTFF 470
Score = 66.5 bits (155), Expect = 8e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK YGG++ Q I G I++ TPGRL D +E N + V FVVLDEADRMLD
Sbjct: 220 LKSICVYGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLD 279
Query: 192 MGF 200
MGF
Sbjct: 280 MGF 282
Score = 40.3 bits (90), Expect = 0.059
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVG-GASTDVEQIFIEVTKYEKRN---- 415
RQ +MFSAT+P D+ LA F++ N + V +G V A+ DV QI IEV R+
Sbjct: 297 RQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQI-IEVLDERARDQRLI 355
Query: 416 SLKQLIEENDGKRILVFVETKRNADFIAAMLR 511
+L + ++ R+LVF K A+ + L+
Sbjct: 356 ALLEKYHKSQKNRVLVFALYKVEAERLERFLQ 387
>UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20;
Ascomycota|Rep: ATP-dependent RNA helicase DBP3 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 523
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++IHGD Q++R +AL FKSGK +L+AT VAARGLDI NV V+N P ++++YVHR
Sbjct: 387 AAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHR 446
Query: 709 IGRTGRVGNRGKAVSFY 759
IGRTGR G G A + +
Sbjct: 447 IGRTGRAGQTGTAHTLF 463
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/71 (36%), Positives = 40/71 (56%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ YGG Q + + ++VATPGRL D ++ V V ++VLDEADRML+
Sbjct: 211 MQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLE 269
Query: 192 MGFMPSIEKMM 224
GF I+ ++
Sbjct: 270 KGFEEDIKNII 280
Score = 47.6 bits (108), Expect = 4e-04
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 7/119 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG--GASTDVEQIFIEVTKYEKRNSLK 424
+RQTLMF+AT+P++++ LA F+NN + V++G A+ + QI V K L
Sbjct: 287 KRQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLL 346
Query: 425 QLIEE-----NDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+L+++ +++L+F K+ A A + RN + AI ++S ++R + L
Sbjct: 347 ELLKKYHSGPKKNEKVLIFALYKKEA---ARVERNLKYNGYNVAAIHGDLSQQQRTQAL 402
>UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 722
Score = 91.9 bits (218), Expect = 2e-17
Identities = 39/86 (45%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSG-KHCILVATAVAARGLDIKNVDIVVNYDL 678
++ E+ + +HG Q +R+ +Q FKSG IL+ T++ ARGLD+K +++V+NYD
Sbjct: 407 NLMERNINCLLLHGGIDQIDRQNTIQEFKSGIGRTILITTSLCARGLDVKGLELVINYDC 466
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSF 756
P +++YVHR+GRTGR G RGKA++F
Sbjct: 467 PNHLEDYVHRVGRTGRAGKRGKAITF 492
Score = 63.3 bits (147), Expect = 7e-09
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVR---FVVLDEA 176
++ VAV +GGT + +Q + RG I+V TPGR+ D + N ++R FVVLDEA
Sbjct: 241 NIRSVAV-FGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEA 299
Query: 177 DRMLDMGFMPSIEKMM 224
DRM DMGF P I++++
Sbjct: 300 DRMFDMGFGPQIKRII 315
Score = 55.2 bits (127), Expect = 2e-06
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV--TKYEKRNSLK 424
++Q +MFSATFP ++ A FL + + G S +EQI +EV TK + +
Sbjct: 321 DKQIVMFSATFPISVEQHAREFLKKPIEIICGGRSQVSNTIEQI-VEVIETKKKIERLIS 379
Query: 425 QLIEEND-GKRILVFVETKRNAD--FIAAMLRNSNC 523
++E+N+ G RI++F ET++N D + M RN NC
Sbjct: 380 IVLEQNNKGGRIIIFTETQKNCDELYQNLMERNINC 415
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 91.9 bits (218), Expect = 2e-17
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Frame = +1
Query: 466 CRNKT*C-RLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLD 642
CR K RLH E +IHGD QRER+ LQ + G LVAT V RG+D
Sbjct: 291 CRTKRGTDRLHRKLSHEYGSACGAIHGDLQQRERDRVLQKLRDGNLKFLVATDVVGRGID 350
Query: 643 IKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
I + +VN+D+P+ D+YVHR+GRTGR+G G A +F
Sbjct: 351 ISTISHIVNFDVPQDCDDYVHRVGRTGRMGRDGVAYTF 388
Score = 69.7 bits (163), Expect = 8e-11
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G ++AV GG + Q + G ++V TPGR+HD ++R + +V VVLDEADR
Sbjct: 140 GVPTEIAVLSGGKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADR 199
Query: 183 MLDMGFMPSIEKMM 224
MLD+GF P IE++M
Sbjct: 200 MLDIGFRPQIERIM 213
Score = 42.7 bits (96), Expect = 0.011
Identities = 29/112 (25%), Positives = 56/112 (50%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL+ SAT P ++ LA +++ + + A +EQ + + + +K L+ L+
Sbjct: 220 RQTLLLSATLPPVVRRLAESYMHEPVVIDCCRDEMAVDTIEQRYFTIAQDDKVRLLESLL 279
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILR 589
+ ++ ++F TKR D + L + S AI ++ R+R R+L+
Sbjct: 280 KREKPEQAIIFCRTKRGTDRLHRKLSHEYGS--ACGAIHGDLQQRERDRVLQ 329
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 91.9 bits (218), Expect = 2e-17
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
H+ L ++IHG++ Q +RE AL F++G+ ILVAT +AARG+D+ V V NY+LP
Sbjct: 269 HLEAAGLPAAAIHGNKSQPQRERALNAFRNGRLKILVATDIAARGIDVPGVSHVFNYELP 328
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSF 756
++YVHRIGRT R G G+A+SF
Sbjct: 329 NVAEQYVHRIGRTARAGRDGQAISF 353
Score = 60.5 bits (140), Expect = 5e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ V +GG + Q + RG ILVATPGRL D +++ + V VLDEAD+MLD
Sbjct: 108 MSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQMLD 167
Query: 192 MGFMPSIEKM 221
+GF+ ++ ++
Sbjct: 168 LGFIHALRRI 177
Score = 58.4 bits (135), Expect = 2e-07
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL FSAT P+ IQ L+ +FL++ + V+V + VEQ I V + EK+ L +
Sbjct: 185 RQTLFFSATMPKTIQELSSQFLSDPVTVSVAPQSSTAERVEQFGIFVNQSEKQALLTITL 244
Query: 434 EENDG-KRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+ G R LVF TK AD ++R+ + L AI N S +R R L
Sbjct: 245 KNTPGLDRALVFTRTKHGAD---RVVRHLEAAGLPAAAIHGNKSQPQRERAL 293
>UniRef50_Q2Z064 Cluster: Probable ATP-dependent RNA helicase; n=1;
uncultured gamma proteobacterium|Rep: Probable
ATP-dependent RNA helicase - uncultured gamma
proteobacterium
Length = 505
Score = 91.9 bits (218), Expect = 2e-17
Identities = 43/95 (45%), Positives = 63/95 (66%)
Frame = +1
Query: 469 RNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIK 648
+ T RLH Q+L ++ +HG+ ER++ + F+ GK I+ A+ VAARGLDI+
Sbjct: 311 KRDTAARLHQL-TQGQRLRSACLHGELTTEERKQVMHRFQEGKVNIVCASDVAARGLDIQ 369
Query: 649 NVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+D+V+NYD+P S D Y+HR GRTGR G +G A+S
Sbjct: 370 GIDLVINYDIPYSGDNYLHRTGRTGRAGQKGLAIS 404
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/69 (39%), Positives = 38/69 (55%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S LK GG ++Q + + I+V TPGRL + + G ++ +VLDEADRM
Sbjct: 157 SPLKAQAITGGADFKYQKSQLRQDPEIIVGTPGRLLEHCRKLSTDLGRLQTLVLDEADRM 216
Query: 186 LDMGFMPSI 212
LDMGF +
Sbjct: 217 LDMGFREDV 225
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 91.9 bits (218), Expect = 2e-17
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHG++ Q R + ++ FKSG+ +LVAT VAARG+D+ +V V+NY LP ++D Y+HRIG
Sbjct: 324 IHGNKSQNFRNKTIEQFKSGETRVLVATDVAARGIDVADVSHVINYQLPMTMDSYIHRIG 383
Query: 715 RTGRVGNRGKAVSF 756
RTGR G G A++F
Sbjct: 384 RTGRAGKTGHAITF 397
Score = 63.7 bits (148), Expect = 6e-09
Identities = 33/83 (39%), Positives = 46/83 (55%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G L A GGT + ++R H++V TPGRL D R + V+ +VLDE DR
Sbjct: 149 GMRLHSATFIGGTNINTDMKVLSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDR 208
Query: 183 MLDMGFMPSIEKMMLHPTMVETT 251
MLDMGF+ ++K++ T E T
Sbjct: 209 MLDMGFVNDVKKLVGGMTQREQT 231
Score = 46.4 bits (105), Expect = 0.001
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Frame = +2
Query: 218 NDVTSNHGGDHER-QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV 394
NDV GG +R QT++FSAT + ++L L N + V + + ++EQ I V
Sbjct: 216 NDVKKLVGGMTQREQTMLFSATLEPNQKNLIQSLLKNPVEVKINTGVSTNENIEQGIIRV 275
Query: 395 TK-YEKRNSLKQLIEENDGKRILVFVETKRNADFIAAMLRNS 517
+ +K L L + +++VF ETKR AD ++ L +
Sbjct: 276 PEGKDKFGMLADLFQNRAMDKVIVFTETKRLADRLSKKLNQA 317
>UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase
superfamily II protein; n=2; Ostreococcus|Rep: Ddx49
Ddx49-related DEAD box helicase superfamily II protein -
Ostreococcus tauri
Length = 419
Score = 91.9 bits (218), Expect = 2e-17
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Frame = +1
Query: 484 CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
C L S + + +SS+H + Q+ER +L FK+G ILVAT VAARGLD+ +VD++
Sbjct: 259 CELLSQMLTTLGIPSSSLHAAKKQKERLNSLGVFKNGTVQILVATDVAARGLDLPSVDMI 318
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF---YDLIRI 774
+NYD+P + +Y+HRIGRT R GKAV+F +D++++
Sbjct: 319 LNYDVPTDVRQYIHRIGRTARFEASGKAVTFVTQFDILKL 358
Score = 48.4 bits (110), Expect = 2e-04
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRL--HDFVERNRVS-FGSVRFVVLDE 173
G+ L V GG + Q ++R +I+VATPGRL H N V F ++ ++LDE
Sbjct: 96 GTGLNCMVITGGEDLIQQATALSRRPNIVVATPGRLFEHFMHSSNTVQYFSKLKCLILDE 155
Query: 174 ADRMLDMGFMPSIEKMM 224
ADR+LD F ++ +M
Sbjct: 156 ADRLLDSSFAAELKYLM 172
>UniRef50_Q8I0W7 Cluster: Snrnp protein, putative; n=6;
Plasmodium|Rep: Snrnp protein, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1123
Score = 91.9 bits (218), Expect = 2e-17
Identities = 40/87 (45%), Positives = 58/87 (66%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
S + + + ++HG + Q RE+ L FK+ + ILVAT VA RG+D+ V +V+N+D
Sbjct: 984 SKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDILVATDVAGRGIDVHGVKLVINFD 1043
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+PK I+ Y HRIGRTGR G +G A+SF
Sbjct: 1044 MPKDIESYTHRIGRTGRAGMKGLAISF 1070
Score = 57.6 bits (133), Expect = 4e-07
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +3
Query: 18 VAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMG 197
VAV GG Q + RG I++ TPGRL D +E+ +V+LDEADRM+DMG
Sbjct: 806 VAVV-GGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMG 864
Query: 198 FMPSIEKMM 224
F ++ ++
Sbjct: 865 FEDTVHYIL 873
Score = 51.2 bits (117), Expect = 3e-05
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
R T MFSAT P ++ L+ ++L ++++G G +EQ +T+ +K+ L++++
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPGAGKRSIEQKLEFLTEGKKKQKLQEIL 963
Query: 434 EENDGKRILVFVETKRNADFIA 499
E + I+VFV K+ AD I+
Sbjct: 964 EMYE-PPIIVFVNQKKVADIIS 984
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 91.9 bits (218), Expect = 2e-17
Identities = 38/76 (50%), Positives = 56/76 (73%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+S+HG + Q ER +A++ F+ + +LVAT + A+GLD NV V+N+D+PK I+ YVHR
Sbjct: 431 TSLHGGKKQEERTKAMKEFQQSQKDVLVATDIGAKGLDFPNVQHVINFDMPKEIESYVHR 490
Query: 709 IGRTGRVGNRGKAVSF 756
IGRTGR+G G+A +F
Sbjct: 491 IGRTGRLGKTGRATTF 506
Score = 48.8 bits (111), Expect = 2e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 87 LVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMMLH 230
+V TPGR D V++ + + R++VLDEADR+LDM F I ++ H
Sbjct: 288 MVGTPGRTSDMVDKQKFNMNLCRYIVLDEADRLLDMIFEKEIRNIIDH 335
Score = 38.7 bits (86), Expect = 0.18
Identities = 25/81 (30%), Positives = 42/81 (51%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL+FS+T P+ +Q A + L + + V VG G + +V Q V + EK L +
Sbjct: 340 RQTLLFSSTMPKKVQDFAKQALIDPIIVNVGRAGQVNLNVIQEVEYVKQEEKLQYLISCL 399
Query: 434 EENDGKRILVFVETKRNADFI 496
++ +L+F + + D I
Sbjct: 400 QKTK-PPVLIFCDKSNDVDDI 419
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 91.9 bits (218), Expect = 2e-17
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG + Q +RE LQ+F+ G IL+AT++AARG+D+KNV +V+NY P I++YVHR+G
Sbjct: 665 LHGGQDQTDREFTLQDFRDGTKGILIATSIAARGIDVKNVVLVINYATPDHIEDYVHRVG 724
Query: 715 RTGRVGNRGKAVSF 756
RTGR GN G + +F
Sbjct: 725 RTGRAGNIGTSYTF 738
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDF--VERNRVS-FGSVRFVVLDEADR 182
++ YGG+ + Q + + RG I+ TPGRL + + +V+ V FVV+DEADR
Sbjct: 490 IRTKAVYGGSPIGEQLNALKRGVEIVCGTPGRLIEVLTISNGKVTNLRRVTFVVIDEADR 549
Query: 183 MLDMGFMPSIEKMM 224
M D+GF P I ++
Sbjct: 550 MFDLGFSPQISAIV 563
Score = 51.2 bits (117), Expect = 3e-05
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT +FSATFP I+ LA + L L + VG G +++ V+Q + + + +K +L +L
Sbjct: 569 DRQTALFSATFPPTIEALAKKILTKPLQIIVGESGKSASQVDQHVMVLPERQKMYALLKL 628
Query: 431 IEE-NDGKRILVFVETKRNADFIAAML 508
+ E ++ I+VFV + +AD + A L
Sbjct: 629 LGEWHEHGSIIVFVNRQLDADSMYAEL 655
>UniRef50_Q5KDK3 Cluster: ATP-dependent RNA helicase ROK1; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase ROK1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 620
Score = 91.9 bits (218), Expect = 2e-17
Identities = 35/78 (44%), Positives = 59/78 (75%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HG + + +R+EA+++F+ G +LV T V ARG+D + V +V+NYD P+++ Y+HRI
Sbjct: 451 AVHGGKAKTKRDEAIKDFRVGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510
Query: 712 GRTGRVGNRGKAVSFYDL 765
GRTGR G GKA++F+++
Sbjct: 511 GRTGRAGRPGKAITFFNI 528
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 42 AVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKM 221
A + G+ G +LVATP RLH ++ R+S ++V+LDE+DR+L F+P +E +
Sbjct: 287 APKVSGNPEGLGIDMLVATPERLHHLIDSRRISLARTKYVILDESDRLLSSDFLPQVEPI 346
Query: 222 M 224
+
Sbjct: 347 L 347
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/86 (45%), Positives = 58/86 (67%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
S + + TS++HGD Q R + + FK + ILVAT +A+RG+D+KN+ V NYD
Sbjct: 260 SDQLYHSDIKTSALHGDMSQGSRTKTINRFKRNETKILVATDLASRGIDVKNISHVFNYD 319
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVS 753
+P+ ++Y+HRIGRTGR N+G A+S
Sbjct: 320 MPRFAEDYIHRIGRTGRANNKGIAIS 345
Score = 63.7 bits (148), Expect = 6e-09
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG + Q ++ ILVATPGRL D ++ +++F + ++LDEADRMLDMGF+P I
Sbjct: 108 GGISYGLQNRMFSKPIDILVATPGRLLDLYQQKKINFKGLEVMILDEADRMLDMGFVPDI 167
Query: 213 EKM 221
K+
Sbjct: 168 RKI 170
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAV-GIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
++Q LMFSATF IQ +A FL N + +++ V G + I+ + K+ L
Sbjct: 177 KQQMLMFSATFDPPIQKIAQEFLTNPVTISIKPDVSGHKNIKQLIYFADNQSHKQQMLDH 236
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLRNSN 520
I+ ++ + ++F TKR AD ++ L +S+
Sbjct: 237 FIKNDEVTQAIIFTATKRMADQLSDQLYHSD 267
>UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 432
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG Q++R AL+ FKSGK ILVAT VA+RGLDI NVDIV+NYD P +YVHR+G
Sbjct: 285 LHGKMSQQKRLIALEKFKSGKRGILVATDVASRGLDIPNVDIVINYDCPLEPKDYVHRVG 344
Query: 715 RTGRVGNRGKAVS 753
RT R G G A++
Sbjct: 345 RTARAGKSGYAIT 357
Score = 43.6 bits (98), Expect = 0.006
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNR---VSFGSVRFVVLDEADRMLDMGFM 203
GG V Q +A+ ++V TPGR+ ++ + S V+F+V+DEAD++L+M F
Sbjct: 117 GGMDVMKQSVQLAKRPQVIVGTPGRIVYHIKNTKGVEESIEKVKFLVIDEADKLLEMDFA 176
Query: 204 PSIEKMM 224
I+ ++
Sbjct: 177 NEIDYLI 183
>UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 432
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD+ Q R + L FK GK +LVAT +A+RGLDI+ + V+NY+LP ++YVHR+G
Sbjct: 272 IHGDKTQANRLKTLNEFKEGKIKVLVATDIASRGLDIEELPFVINYELPSIPEDYVHRVG 331
Query: 715 RTGRVGNRGKAVSFYDL 765
RTGR G G A+S D+
Sbjct: 332 RTGRAGRDGMAISLIDI 348
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ +AV GG + Q + G I++ATPGR+ + V++ +S V VLDEADRMLD
Sbjct: 102 INIAVLVGGKDLESQQKILKEGVDIVIATPGRVLEHVDKG-LSLSHVEIFVLDEADRMLD 160
Query: 192 MGFMPSIEKMMLHPTM 239
MGFM I + +HP +
Sbjct: 161 MGFMKEIRR--IHPIL 174
Score = 44.4 bits (100), Expect = 0.004
Identities = 24/85 (28%), Positives = 41/85 (48%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
QTL+FSATF + ++ L+ L F+ + Q+ V +K L +I
Sbjct: 179 QTLLFSATFSDKVRKLSKLILTKPAFIETSKKNSTVDTINQVAYLVDTEKKAPLLAYIIG 238
Query: 437 ENDGKRILVFVETKRNADFIAAMLR 511
+ +++LVF TK +AD + L+
Sbjct: 239 SRNFRQVLVFTRTKASADLLVVELK 263
>UniRef50_Q1J0S9 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Deinococcus|Rep: DEAD/DEAH box helicase-like protein -
Deinococcus geothermalis (strain DSM 11300)
Length = 591
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/78 (55%), Positives = 54/78 (69%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
+ ++HGD Q +RE AL F+SG+ +LVAT VAARGLDI VD+VV Y LP+ + YVH
Sbjct: 272 SEALHGDLAQSQRERALGAFRSGRVGVLVATDVAARGLDIPEVDLVVQYHLPQDPESYVH 331
Query: 706 RIGRTGRVGNRGKAVSFY 759
R GRTGR G G A+ Y
Sbjct: 332 RSGRTGRAGRTGTAIVMY 349
Score = 66.5 bits (155), Expect = 8e-10
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G L YGG A Q + + RG ++V TPGRL D +ER + ++++ VLDEAD
Sbjct: 100 GPQLSTVTVYGGAAYGPQENALRRGVDVVVGTPGRLIDHLERGNLDLSAIQYAVLDEADE 159
Query: 183 MLDMGFMPSIEKMM 224
ML +GF +IE ++
Sbjct: 160 MLSVGFADAIETIL 173
Score = 43.2 bits (97), Expect = 0.008
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG----GASTDVEQIFIEVTKYEKRNSL 421
RQT++FSAT ++I LA ++L V V +VG A+ VE + ++V + R L
Sbjct: 180 RQTMLFSATLNDEIHRLARKYLREP--VVVDLVGEGKSQAAQSVEHLKVKVGRTRTR-VL 236
Query: 422 KQLIEENDGKRILVFVETKRNADFIA 499
L+ + ++ +VF TKR AD +A
Sbjct: 237 ADLLTVYNPEKAIVFTRTKREADELA 262
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/87 (47%), Positives = 60/87 (68%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
H+ + + ++IHG++ Q +RE AL F+SG+ +LVAT +AARG+D+ NV VVN++LP
Sbjct: 319 HLEDAGIGAAAIHGNKSQGQRERALDQFRSGRIRVLVATDIAARGIDVDNVSHVVNFELP 378
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+ YVHRIGRT R G G A+S +
Sbjct: 379 NVPESYVHRIGRTARAGAEGVAISLVE 405
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = +3
Query: 18 VAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMG 197
VAV GG Q + G +LVATPGRL D V + +V VVLDEAD+MLD+G
Sbjct: 161 VAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEADQMLDLG 220
Query: 198 FMPSIEKMM 224
F+P+I ++M
Sbjct: 221 FIPAIRQIM 229
Score = 55.6 bits (128), Expect = 1e-06
Identities = 37/112 (33%), Positives = 58/112 (51%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ +MFSAT P+ I+ LAG FL + VAV + ++Q + + EK++ L L
Sbjct: 235 QRQAVMFSATMPKPIRALAGEFLRDPREVAVSVESKPVDRIDQQVLLLAPEEKKDKLAWL 294
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+ + +R +VF TK AD + L ++ + AI N S +R R L
Sbjct: 295 LADVAVERAIVFTRTKHGADKVTRHLEDAG---IGAAAIHGNKSQGQRERAL 343
>UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 504
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/87 (47%), Positives = 61/87 (70%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
SS + + + +HG R Q +RE +L +SG+ ILVAT +A+RG+D+ ++ V+NYD
Sbjct: 355 SSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLASRGIDVPDITHVLNYD 414
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
P I+EYVHR+GRTGR G +G+A+SF
Sbjct: 415 FPMDIEEYVHRVGRTGRAGRKGEAMSF 441
Score = 62.9 bits (146), Expect = 1e-08
Identities = 32/70 (45%), Positives = 42/70 (60%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
K YGG + Q + G I++ATPGRL D +S SV +VVLDEADRMLDM
Sbjct: 192 KSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDM 251
Query: 195 GFMPSIEKMM 224
GF +I +++
Sbjct: 252 GFEVAIRRIL 261
>UniRef50_A4RK80 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Magnaporthe grisea|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 674
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/94 (43%), Positives = 63/94 (67%)
Frame = +1
Query: 475 KT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNV 654
K+ C + + ++HG++ Q +RE ALQ+F+ G+ +LVAT VAARGLDI +V
Sbjct: 541 KSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDVAARGLDIPDV 600
Query: 655 DIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+V+N+++ +I+ Y HRIGRTGR G G A++F
Sbjct: 601 SLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITF 634
Score = 65.7 bits (153), Expect = 1e-09
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVE-QIFIEVTKYEKRNSLKQL 430
RQT+M+SAT P ++ +A +L + V +G +G A VE Q V++ E+RN L+ +
Sbjct: 465 RQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAM 524
Query: 431 IEE-NDGKRILVFVETKRNADFIAAMLRNSNCS 526
+ GK ++VFV TK N D +A L++S+ S
Sbjct: 525 LNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFS 557
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 66 IARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
+ G I+VATPGRL D +ER+ + +VVLDEADRM+D GF SI K++
Sbjct: 381 LRNGAEIIVATPGRLVDCLERHLLVLSQCSYVVLDEADRMVDGGFEDSIHKIL 433
>UniRef50_Q6FM43 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase PRP28; n=1; Candida glabrata|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 582
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HG + Q +RE A+Q KSG +L+AT VAARGLDI +V +VVN+ + K D+Y+HRI
Sbjct: 460 TLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRI 519
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G AV++
Sbjct: 520 GRTGRAGKTGIAVTY 534
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/66 (39%), Positives = 42/66 (63%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG ++ + GC IL+ATPGRL D ++ + V ++ +VLDEADRM+D+GF +
Sbjct: 293 GGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQM 352
Query: 213 EKMMLH 230
+ ++ H
Sbjct: 353 KSILSH 358
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 91.1 bits (216), Expect = 3e-17
Identities = 41/87 (47%), Positives = 57/87 (65%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
H+ + ++IHG++ Q R+ AL F+ G ILVAT +AARG+D+ + VVNYDLP
Sbjct: 349 HLERDRYDVAAIHGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGISHVVNYDLP 408
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+ YVHRIGRTGR G G +++ YD
Sbjct: 409 DEPETYVHRIGRTGRNGASGASITLYD 435
Score = 65.3 bits (152), Expect = 2e-09
Identities = 43/124 (34%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 218 NDVTSNHGGDH-ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV 394
NDV H ERQT +FSAT P++I LA R L + + V V G ++++ Q+ V
Sbjct: 253 NDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGATASEITQVVHPV 312
Query: 395 TKYEKRNSLKQLIEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKR 574
EKR L ++ + D + ++VF TK AD A++R+ AI N S R
Sbjct: 313 PTKEKRRLLSAMLTDADMRSVIVFTRTKHGAD---AVVRHLERDRYDVAAIHGNKSQNAR 369
Query: 575 YRIL 586
R L
Sbjct: 370 QRAL 373
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ A+ GG + Q IA G +L+ATPGRL D + V R++VLDEADRMLD
Sbjct: 189 ISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLD 248
Query: 192 MGFMPSIEKM 221
MGF+ ++++
Sbjct: 249 MGFINDVKRI 258
>UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Firmicutes|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 484
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/74 (52%), Positives = 52/74 (70%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHG QR+R + FK G LVAT VAARG+DI N+ +V+NYD+P+ + YVHRIG
Sbjct: 272 IHGGMEQRDRVRVMNEFKQGYFRYLVATDVAARGIDIDNISLVINYDIPQDKESYVHRIG 331
Query: 715 RTGRVGNRGKAVSF 756
RTGR+ G+A++F
Sbjct: 332 RTGRISREGRAITF 345
Score = 64.1 bits (149), Expect = 4e-09
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LKVA YG HQ + + H++V TPGR+ D +E+ ++++V+DEAD M +
Sbjct: 101 LKVAAVYGKAPFYHQEKELKQKTHVVVGTPGRIIDHMEKGTFDTSQIKYLVIDEADEMFN 160
Query: 192 MGFMPSIEKMM 224
MGF+ IE ++
Sbjct: 161 MGFVDQIETII 171
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 91.1 bits (216), Expect = 3e-17
Identities = 47/92 (51%), Positives = 59/92 (64%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+++HGD Q RE AL+ F++GK LVAT VAARG+D+ V V+NYD P+ D Y HR
Sbjct: 382 AAVHGDLGQGARERALRAFRTGKIDTLVATDVAARGIDVSGVTHVLNYDCPEDQDTYTHR 441
Query: 709 IGRTGRVGNRGKAVSFYDLIRI*P*WLIFQNT 804
IGRTGR G G AV+F D + P W I T
Sbjct: 442 IGRTGRAGASGVAVTFVDWDDM-PRWRIIDKT 472
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++V YGG A Q + + G ILV TPGRL D ++ + VR +VLDEADRMLD
Sbjct: 211 VRVLPIYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQKHLKLDRVRALVLDEADRMLD 270
Query: 192 MGFMPSIEKMM 224
+GF+ +E+++
Sbjct: 271 LGFLDDVERIL 281
Score = 46.4 bits (105), Expect = 0.001
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG--GASTDVEQIFIEVTKYEKRNSLK 424
+RQT++FSAT P+ I L+ RFL + + G G S +Q+ K +
Sbjct: 287 DRQTMLFSATMPDPIVALSRRFLRRPVTIHAGHTAETGPSPQTQQLAYRTHSLNKIEIVA 346
Query: 425 QLIEENDGKRILVFVETKRNADFIAAML 508
++++ ++F TKR AD +AA L
Sbjct: 347 RILQARGRGLTMIFTRTKRAADRVAADL 374
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA -
Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/75 (53%), Positives = 57/75 (76%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HG Q +R+ + +FKSGK +L+AT+VAARGLD+K++ +VVNYD+P ++YVHR
Sbjct: 786 SLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRC 845
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G +G A +F
Sbjct: 846 GRTGRAGKKGSAYTF 860
Score = 63.7 bits (148), Expect = 6e-09
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERN--RV-SFGSVRFVVLDEADR 182
L+ YGGT + Q + RG I+V TPGR+ D + N RV + V +VVLDEADR
Sbjct: 612 LRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 671
Query: 183 MLDMGFMPSIEKMM 224
M DMGF P + +++
Sbjct: 672 MFDMGFEPQVMRII 685
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQT+MFSATFP ++ LA R L + V VG +VEQ + + K L +L
Sbjct: 691 DRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKEVEQHVVILNDDAKFFKLLEL 750
Query: 431 IE-ENDGKRILVFVETKRNADFI 496
+ + I+VFV+ + NAD +
Sbjct: 751 LGIYQEAGSIIVFVDKQENADIL 773
>UniRef50_Q234J0 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 744
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/75 (53%), Positives = 52/75 (69%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD Q++RE Q F+ GK LVAT VAARGLDI VD++V + PK +D Y+HR G
Sbjct: 355 LHGDIPQKQREITFQGFREGKFKCLVATNVAARGLDIPEVDLIVQLEPPKELDAYIHRSG 414
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G +G ++FY
Sbjct: 415 RTGRAGKKGVCITFY 429
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
+V YGG VR Q + I G I+V TPGR+ D ER + F S+ VLDEAD+ML+
Sbjct: 175 RVLQIYGGVDVREQANQIRDGVEIVVGTPGRIIDQYERGALMFHSIIATVLDEADQMLNF 234
Query: 195 GFMPSIEKM 221
GF IEK+
Sbjct: 235 GFQEDIEKI 243
Score = 38.7 bits (86), Expect = 0.18
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +2
Query: 233 NHGGDHERQTLMFSATFPEDIQHLAGRFL--NNYLFVAVGIVGG-ASTDVEQIFIEVTKY 403
N G+ Q L+FSAT P + +A +FL + L V +G S DV + I +
Sbjct: 249 NDKGEERPQNLLFSATMPSWVHDIARKFLREDRVLIDLVKNLGNKTSQDVTHLAINCPYF 308
Query: 404 EKRNSLKQLIEENDG---KRILVFVETKRNADFI 496
++ ++ +I G R+++F ETK A+ I
Sbjct: 309 QRTEAIGDVILCYGGGAHSRVIIFCETKNEANEI 342
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42; n=2;
Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA
helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 91.1 bits (216), Expect = 3e-17
Identities = 38/75 (50%), Positives = 57/75 (76%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HG + Q +RE + +FK+ +L+AT+VAARGLD+K +++VVN+D P ++YVHR+
Sbjct: 805 SLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRV 864
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G +G AV+F
Sbjct: 865 GRTGRAGRKGCAVTF 879
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVR---FVVLDEADR 182
++ YGG+ V Q + RG I+V TPGR+ D + + ++R F+V+DEADR
Sbjct: 631 IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADR 690
Query: 183 MLDMGFMPSIEKMM 224
M DMGF P I +++
Sbjct: 691 MFDMGFEPQITRII 704
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKR--NSLK 424
ERQT++FSATFP ++ LA + LN + + VG + D+ Q+ +EV R L+
Sbjct: 710 ERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQL-VEVRPESDRFLRLLE 768
Query: 425 QLIEENDGKRILVFVETKRNAD 490
L E ++ +ILVFV+++ D
Sbjct: 769 LLGEWSEKGKILVFVQSQEKCD 790
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHG + Q +RE A+ +FK+GK +LVAT VA++GLD ++ V+NYD+P I+ YVHRI
Sbjct: 426 AIHGGKDQEDREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRI 485
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G A +F
Sbjct: 486 GRTGRCGKTGIATTF 500
Score = 68.1 bits (159), Expect = 3e-10
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ + GG +R Q + + RG HI+VATPGRL D + + ++S + R++ LDEADR++D
Sbjct: 257 LRSLLCIGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVD 316
Query: 192 MGFMPSIEKMMLH 230
+GF I ++ H
Sbjct: 317 LGFEDDIREVFDH 329
Score = 43.2 bits (97), Expect = 0.008
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSAT P IQ A L + V VG G A+ DV Q EV ++ + L
Sbjct: 333 QRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQ---EVEYVKQEAKIVYL 389
Query: 431 IE--ENDGKRILVFVETKRNADFI 496
+E + +L+F E K + D I
Sbjct: 390 LECLQKTSPPVLIFCENKADVDDI 413
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 91.1 bits (216), Expect = 3e-17
Identities = 45/97 (46%), Positives = 62/97 (63%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C K C+ + E S+HGD QR+R++ L F +G +LVAT VAARGLDI
Sbjct: 248 CNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDI 307
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
K++++VVN++L + +VHRIGRT R GN G A+SF
Sbjct: 308 KSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISF 344
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
K+ GG Q D++ HI+VATPGRL D +++ VS ++ +V+DEADRMLDM
Sbjct: 102 KILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDM 161
Query: 195 GFMPSIEKMM 224
GF +I+ ++
Sbjct: 162 GFSDAIDDVI 171
Score = 44.4 bits (100), Expect = 0.004
Identities = 29/93 (31%), Positives = 46/93 (49%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL+FSAT+PE I ++GR + L + + A +EQ F E + K L++L+
Sbjct: 178 RQTLLFSATWPEAIAAISGRVQRDPLAIEIDST-DALPPIEQQFYETSSKGKIPLLQRLL 236
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSNCSHL 532
+ +VF TK++ + L S L
Sbjct: 237 SLHQPSSCVVFCNTKKDCQAVCDALNEVGQSAL 269
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/83 (50%), Positives = 56/83 (67%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+ Q + S+IHG++ Q R AL+ FK+G ILVAT +AARG+DI + V+N DLP
Sbjct: 286 LCHQHMRASAIHGNKSQGARTRALEGFKNGDIKILVATDIAARGIDIHQLPYVINLDLPN 345
Query: 685 SIDEYVHRIGRTGRVGNRGKAVS 753
++YVHRIGRTGR G G A+S
Sbjct: 346 VAEDYVHRIGRTGRAGEAGHAIS 368
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ +GG ++R Q + G ILVATPGRL D + + + F +++ +VLDEADRMLD
Sbjct: 125 LRSDAVFGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLD 184
Query: 192 MGFMPSIEKMM 224
MGF+ I+K++
Sbjct: 185 MGFIRDIKKVI 195
Score = 54.8 bits (126), Expect = 3e-06
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQ +MFSATF I+ LA LN+ + + + A+ +E + K + L LI
Sbjct: 202 RQNMMFSATFSTPIKKLALGLLNDPVEIKASVQNQAAPTIEHLVHPCDMARKVDLLCHLI 261
Query: 434 EENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+ N K++LVF TK AD + +L + H++ +AI N S R R L
Sbjct: 262 KTNKWKQVLVFARTKHGADKVVKILCH---QHMRASAIHGNKSQGARTRAL 309
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 90.6 bits (215), Expect = 4e-17
Identities = 40/88 (45%), Positives = 60/88 (68%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
S ++ + + I GD Q ERE ++ K+G +LVAT VAARGLD++ + +VVN+D
Sbjct: 310 SLELSSRGFRAAGISGDVAQTERERMVERLKNGSLDVLVATDVAARGLDVERISLVVNFD 369
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
+P+ + YVHRIGRTGR G G+A++F+
Sbjct: 370 VPREPEAYVHRIGRTGRAGREGRALTFF 397
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/68 (42%), Positives = 39/68 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V YGG+ Q + RG ++V TPGR+ D +E+ + VR +VLDEAD ML
Sbjct: 143 LDVVPVYGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLR 202
Query: 192 MGFMPSIE 215
MGF +E
Sbjct: 203 MGFAEDVE 210
>UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-dependent RNA helicase -
Sulfurovum sp. (strain NBC37-1)
Length = 447
Score = 90.6 bits (215), Expect = 4e-17
Identities = 36/73 (49%), Positives = 57/73 (78%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG+R +ER+++L F+ G++ ILVAT +AARGLDI ++D+V+NYD+P +++HR+G
Sbjct: 274 LHGERTHQERKKSLNAFREGRYRILVATDIAARGLDISDLDVVINYDIPHVKHDFIHRVG 333
Query: 715 RTGRVGNRGKAVS 753
RTGR G G A++
Sbjct: 334 RTGRAGREGIAIT 346
Score = 53.2 bits (122), Expect = 8e-06
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V + GG + + + +G +++ATP R + +E + ++R +V+DEAD M D
Sbjct: 103 LNVVLLQGGGRRTVETERLKKGVDVIIATPQRALEHIEAQHIDIKAIRHLVVDEADMMFD 162
Query: 192 MGFMPSIEKM 221
MGF+ +EK+
Sbjct: 163 MGFVGYLEKI 172
>UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 970
Score = 90.6 bits (215), Expect = 4e-17
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG Q +R+ ++ +FK+G +LVAT+VAARGLD+KN+ +VVNYD P ++YVHR+G
Sbjct: 582 LHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVG 641
Query: 715 RTGRVGNRGKAVSF 756
RTGR G +G A +F
Sbjct: 642 RTGRAGRKGYAYTF 655
Score = 64.1 bits (149), Expect = 4e-09
Identities = 33/74 (44%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR---VSFGSVRFVVLDEADR 182
LKVA YGG + Q ++ RG I+V TPGR+ D + N + V ++VLDEADR
Sbjct: 406 LKVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADR 465
Query: 183 MLDMGFMPSIEKMM 224
M D GF P I K++
Sbjct: 466 MFDKGFEPQIMKVV 479
Score = 41.1 bits (92), Expect = 0.034
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
++QT++FSATFP ++ LA + L+ + + VG +D+ Q + +++K L +L
Sbjct: 485 DKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAVICAEHQKFLKLLEL 544
Query: 431 I--EENDGKRILVFVETKRNADFIAAML 508
+ +G I VFV+ + AD I L
Sbjct: 545 LGMYYEEGSSI-VFVDKQEKADDIVDQL 571
>UniRef50_Q22MC1 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 440
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/90 (46%), Positives = 61/90 (67%)
Frame = +1
Query: 484 CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
C ++ + + + ++S+H Q +R L+ FKS ILVAT VA+RGLDI VD+V
Sbjct: 260 CHFINALLNQLEFSSTSLHSGLKQGQRISHLKTFKSQAANILVATDVASRGLDIPTVDLV 319
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+NYD+PK+ D+Y+HR+GRT R G RG A+S
Sbjct: 320 INYDIPKNSDDYIHRVGRTARKGKRGLAIS 349
Score = 46.4 bits (105), Expect = 0.001
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRV---SFGSVRFVVLDEADR 182
L+V+ GG Q + R HI+V TPGR D ++++ V +V+++VLDEADR
Sbjct: 99 LRVSTLVGGVDFNKQLSELERIPHIVVGTPGRTLDMIDKSPVLKEYIENVKYLVLDEADR 158
Query: 183 MLDMGFMPSIEKMM 224
+ + + I+ ++
Sbjct: 159 LFEDSIIEDIQSIL 172
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 90.6 bits (215), Expect = 4e-17
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHG+R +R AL+ F +G+ I+VAT VA+RGLDI NV V+N DLP +D Y HRI
Sbjct: 393 AIHGERQMDQRLAALRQFTTGRANIMVATDVASRGLDISNVAHVINLDLPTDLDTYTHRI 452
Query: 712 GRTGRVGNRGKAVSFYD 762
GRTGR G G A SF++
Sbjct: 453 GRTGRAGKHGLATSFFN 469
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/74 (44%), Positives = 53/74 (71%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ LK +GG + Q N++RG I++ATPGRL D ++++ ++ VRF++LDEADR
Sbjct: 217 GTDLKTTCVFGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADR 276
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF P +++++
Sbjct: 277 MLDMGFEPQMQEVI 290
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/87 (39%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
+RQT++FSATFP+ +++LA F+ Y ++VG + A +EQ FI ++ +K + L
Sbjct: 300 DRQTMLFSATFPDAVRNLARDFMRPKYCRISVG-MQDAPKSIEQRFIYCSEMDKFSELLG 358
Query: 428 LIEENDGKRILVFVETKRNADFIAAML 508
+I+E DG LVF E K + D I L
Sbjct: 359 VIKEVDGP-TLVFAERKVSVDRIERFL 384
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 90.6 bits (215), Expect = 4e-17
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HG + Q +R +AL+ F +G+ +LVAT VAA+GLD ++ V+NYD+PK I+ Y+HRIG
Sbjct: 398 LHGGKQQEDRTKALKQFLNGQKDVLVATDVAAKGLDFPDIKHVINYDMPKDIESYIHRIG 457
Query: 715 RTGRVGNRGKAVSF 756
RTGR G G+A +F
Sbjct: 458 RTGRQGKTGRATTF 471
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG + Q +I G HI++ TPGR+ D V + +++ RF+VLDEADRMLD F I
Sbjct: 235 GGMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELEI 294
Query: 213 EKMMLHPT 236
++ H T
Sbjct: 295 RNILEHFT 302
Score = 39.5 bits (88), Expect = 0.10
Identities = 25/81 (30%), Positives = 44/81 (54%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQT++FSAT P+ IQ + L + L + VG G + +V Q + V + EK + L +
Sbjct: 305 RQTMLFSATLPKKIQEFTKQTLVDPLVINVGRSGQINLNVIQEILYVKQEEKLHYLLDCL 364
Query: 434 EENDGKRILVFVETKRNADFI 496
++ +++F E + + D I
Sbjct: 365 KKTT-PPVVIFSEHQNDVDDI 384
>UniRef50_Q8SR63 Cluster: ATP-dependent rRNA helicase RRP3; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase RRP3 - Encephalitozoon cuniculi
Length = 400
Score = 90.6 bits (215), Expect = 4e-17
Identities = 41/99 (41%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
Frame = +1
Query: 487 RLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVV 666
R+ S +A + ++HG+ Q +REEA+++FK + +LV T + +RGLDI +VD+V+
Sbjct: 253 RVMSLALARLGFCSEALHGELSQEKREEAMRSFKESRFNVLVCTDLGSRGLDISHVDLVI 312
Query: 667 NYDLPKSIDEYVHRIGRTGRVGNRGKAVSF---YDLIRI 774
N+D+PKS +Y+HR+GRT R G G A++ YD+ +I
Sbjct: 313 NFDVPKSGKDYIHRVGRTARAGRSGTAITLVTQYDVEQI 351
Score = 46.4 bits (105), Expect = 0.001
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGS--VRFVVLDEADRM 185
L+V + GG Q + +++ H++V TPGR+ + V + + SF + VR VLDEADR
Sbjct: 97 LRVCLLVGGANFNVQANQLSKRPHVVVGTPGRIAEHVLKTK-SFRTERVRKFVLDEADRF 155
Query: 186 LDMGFMPSIEKMM 224
+ F+ +E ++
Sbjct: 156 FEQDFVEDLETII 168
Score = 37.5 bits (83), Expect = 0.42
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+F+AT ++I L+ L + +++ ++ V K ++L +L
Sbjct: 174 KRQTLLFTATMSDEISKLSSSILKRPKTIRTAEKYETVPALKEYYLFVAMKWKNSALVEL 233
Query: 431 IEENDGKRILVFVETKRNADFIA-AMLRNSNCSHLQFTAIACNVSARKRYRILR 589
+E + G ++VFV A ++ A+ R CS A+ +S KR +R
Sbjct: 234 LEMSQGMSVIVFVSMCVTARVMSLALARLGFCSE----ALHGELSQEKREEAMR 283
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 90.2 bits (214), Expect = 6e-17
Identities = 43/74 (58%), Positives = 54/74 (72%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
SI+GD+ Q R+ AL FK GK L+AT VAARGLDI+ ++ VVN+D+P ++YVHRI
Sbjct: 276 SINGDKSQGARQRALDEFKQGKVRALIATDVAARGLDIQELEQVVNFDMPFKAEDYVHRI 335
Query: 712 GRTGRVGNRGKAVS 753
GRTGR G G AVS
Sbjct: 336 GRTGRAGKSGLAVS 349
Score = 71.3 bits (167), Expect = 3e-11
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L++ YGGT++ Q + + G IL+ATPGRL D + V+ +VLDEADRMLD
Sbjct: 106 LRIVCVYGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLD 165
Query: 192 MGFMPSIEKMM 224
MGF P +++++
Sbjct: 166 MGFWPDLQRIL 176
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/88 (30%), Positives = 52/88 (59%)
Frame = +2
Query: 248 HERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
+++Q ++FSATF + I+ +A + +++ + V V + V+Q+ V K KR L
Sbjct: 181 NDKQIMLFSATFEKRIKTIAYKLMDSPVEVEVSPANTTAETVKQMVYPVDKKRKRELLAY 240
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLR 511
LI + +++LVF +TK+ +D +A L+
Sbjct: 241 LIGSRNWQQVLVFTKTKQGSDELAKELK 268
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 90.2 bits (214), Expect = 6e-17
Identities = 40/75 (53%), Positives = 52/75 (69%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+++GD Q +RE + KSGK ILVAT V ARGLDI + +V+NYDLP + YVHRI
Sbjct: 283 ALNGDLNQAQRERCIDQMKSGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRI 342
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G +++F
Sbjct: 343 GRTGRAGREGMSIAF 357
Score = 66.5 bits (155), Expect = 8e-10
Identities = 31/73 (42%), Positives = 44/73 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+VA YGG + Q + RG ++V TPGRL D + R + +R VLDEAD ML+
Sbjct: 113 LRVATLYGGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLN 172
Query: 192 MGFMPSIEKMMLH 230
MGF+ I+ ++ H
Sbjct: 173 MGFLEDIQWILDH 185
Score = 43.6 bits (98), Expect = 0.006
Identities = 25/87 (28%), Positives = 45/87 (51%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
Q +FSAT P I+ +A RFL + + V V A ++ Q +V+ K +L+++ E
Sbjct: 191 QMCLFSATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGITKMTALERIAE 250
Query: 437 ENDGKRILVFVETKRNADFIAAMLRNS 517
+ +++FV T+ + IA L +
Sbjct: 251 VVEYDAMIIFVRTRNDTVDIAEKLERA 277
>UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=1;
Oceanobacter sp. RED65|Rep: Probable ATP-dependent RNA
helicase - Oceanobacter sp. RED65
Length = 449
Score = 90.2 bits (214), Expect = 6e-17
Identities = 39/76 (51%), Positives = 55/76 (72%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD Q ER + ++G+ +LVAT VAARGLDI+++D+V+N+D+ +S D+YVHRIG
Sbjct: 275 LHGDMTQDERNHVMTQMRNGRFKVLVATDVAARGLDIQSIDLVINFDMARSGDDYVHRIG 334
Query: 715 RTGRVGNRGKAVSFYD 762
RTGR G A+S D
Sbjct: 335 RTGRAEASGSAISLID 350
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/56 (42%), Positives = 34/56 (60%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGF 200
GG + Q + I++ATPGRL D +++ + V + +LDEADRMLDMGF
Sbjct: 107 GGQEFKFQAALFRKNPEIIIATPGRLIDHLKQKKDLMEDVEYFILDEADRMLDMGF 162
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 90.2 bits (214), Expect = 6e-17
Identities = 43/89 (48%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHC-ILVATAVAARGLDIKNVDIVVNY 672
S + + + SIHGD+ Q+ER AL FK+ + +LVAT VAARGLD+ ++D+V+NY
Sbjct: 346 SDFLKSKSIRCLSIHGDKTQQERVVALDKFKNARTGGVLVATDVAARGLDVTDIDLVLNY 405
Query: 673 DLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
D P I++YVHRIGRT R G A++F+
Sbjct: 406 DFPGDIEDYVHRIGRTARGEKTGVAITFF 434
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/91 (31%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTD-VEQIFIEVTKYEKRNSLKQ 427
+R+T MFSAT+P++I+ LA FL+N + + VG A+ + ++Q + + ++EK +
Sbjct: 263 DRETFMFSATWPKEIRQLASDFLSNPIHMHVGGEELATNERIQQNVLLLQEHEKGEKCVE 322
Query: 428 LIEENDGKRILVFVETKRNADFIAAMLRNSN 520
+++EN K+I++F +TKR ++ L++ +
Sbjct: 323 ILKENQSKKIIIFAKTKRTVQQLSDFLKSKS 353
Score = 56.4 bits (130), Expect = 8e-07
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG Q + + I+ ATPGRL DF++ + F+VLDEADRMLDMGF P
Sbjct: 193 YGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRMLDMGFEPQ 252
Query: 210 IEKMM 224
I ++
Sbjct: 253 IRAII 257
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 90.2 bits (214), Expect = 6e-17
Identities = 39/79 (49%), Positives = 57/79 (72%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
+++++GD Q RE+ L+ K G+ IL+AT VAARGLD++ + +VVNYD+P + YVH
Sbjct: 272 SAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVH 331
Query: 706 RIGRTGRVGNRGKAVSFYD 762
RIGRTGR G G+A+ F +
Sbjct: 332 RIGRTGRAGRAGRALLFVE 350
Score = 54.8 bits (126), Expect = 3e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ V YGG Q + +G I+V TPGRL D ++R + + +VLDEAD ML
Sbjct: 104 VNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR 163
Query: 192 MGFMPSIEKMM 224
MGF+ +E +M
Sbjct: 164 MGFIEDVETIM 174
Score = 41.9 bits (94), Expect = 0.019
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
QT +FSAT PE I+ + RF+ V + D+ Q + V K +L + +E
Sbjct: 182 QTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFLE 241
Query: 437 ENDGKRILVFVETKR-NADFIAAMLRN 514
D ++FV TK + A+ RN
Sbjct: 242 AEDFDAAIIFVRTKNATLEVAEALERN 268
>UniRef50_UPI0000499D6F Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 585
Score = 89.8 bits (213), Expect = 7e-17
Identities = 37/74 (50%), Positives = 55/74 (74%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHG + Q ER +AL FK K+ ++VAT + +RG+DI++V V+NY++P+ I+EY HR+G
Sbjct: 473 IHGGKRQIERTDALDGFKRKKYSVMVATNILSRGIDIESVANVINYEMPQKIEEYTHRVG 532
Query: 715 RTGRVGNRGKAVSF 756
RTGR G G A++F
Sbjct: 533 RTGRAGKGGNAITF 546
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/62 (41%), Positives = 40/62 (64%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+V GG ++ Q + ++ G I+VA PGRL D + ++ + G FVVLDEAD+M+D
Sbjct: 281 LRVCCCIGGEPMQPQIEELSNGAEIVVAAPGRLKDLLNQSYLVLGQCYFVVLDEADKMID 340
Query: 192 MG 197
+G
Sbjct: 341 LG 342
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +2
Query: 239 GGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNS 418
G R TLM+SAT P ++ + +L + +++G G + +V+Q + V K+
Sbjct: 375 GNPSTRTTLMYSATMPSTLEKITNEYLRRPITISIGKTGNVAENVKQNILWVEDNMKKRK 434
Query: 419 LKQLIEENDGKRILVFVETKRNADFIAAMLRNS--NC 523
L Q+I+ + I VFV ++ + I +L NC
Sbjct: 435 LIQVIKSSSPPTI-VFVNQQKTVEEICLLLEKEKINC 470
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 89.8 bits (213), Expect = 7e-17
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHG +Q +R + +F+ GK LVAT VAARG+DI N+ V+NYD+P + YVHR G
Sbjct: 272 IHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTG 331
Query: 715 RTGRVGNRGKAVSF 756
RTGR GN GKA++F
Sbjct: 332 RTGRAGNSGKAITF 345
Score = 60.9 bits (141), Expect = 4e-08
Identities = 26/71 (36%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K A YG + Q + + HI+V TPGR+ D +E+ +S ++++V+DEAD ML+
Sbjct: 101 IKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLN 160
Query: 192 MGFMPSIEKMM 224
MGF+ +E ++
Sbjct: 161 MGFIDQVEAII 171
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/90 (27%), Positives = 45/90 (50%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+R T++FSAT PED++ L+ ++N + + G + +E EV + EK + LK +
Sbjct: 177 KRMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDV 236
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSN 520
+ ++F T+ N D + L N
Sbjct: 237 TTIENPDSCIIFCRTQENVDHVYRQLDRVN 266
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 89.8 bits (213), Expect = 7e-17
Identities = 38/87 (43%), Positives = 59/87 (67%)
Frame = +1
Query: 502 HVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLP 681
++ + + ++IHG++ Q R+ AL NFK +LVAT +AARG+D+ ++ V+N+D+
Sbjct: 344 YLLKHDITAAAIHGNKAQNARQRALTNFKEQTMRVLVATDIAARGIDVDELEYVINFDMS 403
Query: 682 KSIDEYVHRIGRTGRVGNRGKAVSFYD 762
+ YVHRIGRTGR G +G A+SF D
Sbjct: 404 NIAETYVHRIGRTGRAGAKGTAISFCD 430
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V +GG Q ++ +G IL+ATPGRL D + + + ++ F VLDEADRMLD
Sbjct: 184 LTSTVIFGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLD 243
Query: 192 MGFMPSIEKMM 224
MGF+ I K++
Sbjct: 244 MGFIHDIRKIL 254
Score = 54.0 bits (124), Expect = 5e-06
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
++Q+L FSAT P +I LA L+N + V+V V + Q V K K N L L
Sbjct: 260 KKQSLFFSATMPPEITRLAASILHNPVEVSVTPVSSTVEIINQQIFFVDKGNKNNLLVHL 319
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
++ D K LVF TK AD + L
Sbjct: 320 LKNQDIKTALVFTRTKHGADKVVKYL 345
>UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Probable ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 410
Score = 89.8 bits (213), Expect = 7e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Frame = +1
Query: 451 KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAA 630
K + C +KT R + + + +HGD Q+ R ++ F+ G ILV T +AA
Sbjct: 243 KAVVFCNSKTEARRLDGFIRYHKFKAALLHGDVQQKGRFATIEGFRKGTTKILVTTDLAA 302
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
RGLDI+ VD+V+N ++P+ D Y+HRIGRTGR G GKAVS
Sbjct: 303 RGLDIEGVDLVINTEIPRKGDLYIHRIGRTGRGGASGKAVS 343
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G L GG + Q +AR ++VATPGRL +E + S+ +VLDEADR
Sbjct: 97 GLDLNAVAIVGGEDFKKQEKQLARA-DLVVATPGRLIPHLENRSIELDSLDLLVLDEADR 155
Query: 183 MLDMGFMPSIEKMM 224
+L+ GF ++++++
Sbjct: 156 ILETGFKEALDQIL 169
Score = 39.5 bits (88), Expect = 0.10
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ-IFIEVTKYEKRNSLKQL 430
RQTL+ SAT P ++ LA R L +V VG ++EQ I + + K L L
Sbjct: 176 RQTLLVSATLPTSVRKLAERILQEPEWVRVGQKREVEANIEQRIILSDDQTLKDKQLCWL 235
Query: 431 IEENDGKRILVFVETKRNADFIAAMLR 511
+E + +VF +K A + +R
Sbjct: 236 LENESYDKAVVFCNSKTEARRLDGFIR 262
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 89.8 bits (213), Expect = 7e-17
Identities = 38/84 (45%), Positives = 62/84 (73%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+A+ +++IHGDR Q +R +AL+ F+ G + +LVAT VAARG+ ++ + VVN+DLP+
Sbjct: 261 LAQSGFKSAAIHGDRSQNQRIQALKGFQEGYYRVLVATDVAARGIHVEGISHVVNFDLPQ 320
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSF 756
++++HR+GRTGR G +G A +F
Sbjct: 321 VPEDFIHRVGRTGRAGAKGTASTF 344
Score = 80.6 bits (190), Expect = 5e-14
Identities = 36/74 (48%), Positives = 56/74 (75%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G+ ++ AVA GG R Q +I G +I+VATPGRL+DF+ R ++ +VR ++LDE+DR
Sbjct: 98 GTGIRAAVAVGGLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDR 157
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF+P+I++++
Sbjct: 158 MLDMGFLPTIKRII 171
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/89 (33%), Positives = 44/89 (49%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTL+FSAT ++ L + N + + +G + S V+ EV + K L+ +
Sbjct: 177 ERQTLLFSATLESSVKQLVETHVRNAVRIELGSISKPSEQVDLHLYEVDQDRKFGLLEMM 236
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNS 517
+ E G LVF TK AD +A L S
Sbjct: 237 LREEQGS-FLVFARTKHGADKLAKKLAQS 264
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 89.8 bits (213), Expect = 7e-17
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++I+GD Q++RE +Q K GK ILVAT VAARGLD++ + V+NYD+P + Y HR
Sbjct: 274 AAINGDIQQQQRERTIQQLKDGKIDILVATDVAARGLDVERISHVINYDVPHDPESYTHR 333
Query: 709 IGRTGRVGNRGKAVSF 756
IGRTGR G G+A+ F
Sbjct: 334 IGRTGRAGRSGEAILF 349
Score = 60.5 bits (140), Expect = 5e-08
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG + Q + RG H++V TPGR+ D +E+ + ++ +VLDEAD ML MGF+
Sbjct: 111 YGGQSYGAQLSALRRGVHVVVGTPGRVIDHLEKGSLDLSRIKTMVLDEADEMLRMGFIDD 170
Query: 210 IEKMM 224
+E ++
Sbjct: 171 VETIL 175
Score = 46.8 bits (106), Expect = 7e-04
Identities = 23/86 (26%), Positives = 48/86 (55%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQT +FSAT P I+ +A +L + + V G + ++ Q + V+ +K ++L +++
Sbjct: 182 RQTALFSATMPSAIKRIATTYLRDPDLITVAAKTGTADNIRQRYWLVSGMQKLDALTRIL 241
Query: 434 EENDGKRILVFVETKRNADFIAAMLR 511
E + +++F TK + +A+ L+
Sbjct: 242 EAENFDGMIIFARTKLGTEELASKLQ 267
>UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein;
n=31; Actinobacteria (class)|Rep: DEAD/DEAH box helicase
domain protein - Mycobacterium sp. (strain KMS)
Length = 507
Score = 89.8 bits (213), Expect = 7e-17
Identities = 43/98 (43%), Positives = 64/98 (65%)
Frame = +1
Query: 469 RNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIK 648
R K + + +AE+ ++HGD Q RE+AL++F++G+ +LVAT VAARG+DI
Sbjct: 268 RTKRTAQKVADELAERGFKVGAVHGDLGQGAREKALKSFRTGEVDVLVATDVAARGIDID 327
Query: 649 NVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
++ V+N+ +P+ YVHRIGRTGR G G AV+ D
Sbjct: 328 DITHVINFQIPEDEQAYVHRIGRTGRAGKTGVAVTLVD 365
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V YGG Q +++ +G ++V TPGRL D ++ + G + +VLDEAD MLD
Sbjct: 117 LSVVSIYGGRPYEPQIESLRKGADVVVGTPGRLLDLAQQGHLQLGGLSVLVLDEADEMLD 176
Query: 192 MGFMPSIEKMM 224
+GF+P IE+++
Sbjct: 177 LGFLPDIERIL 187
Score = 34.3 bits (75), Expect = 3.9
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGAST--DVEQIFIEVTKYEKRNSLKQ 427
RQ ++FSAT P+ I LA F+N + ++T Q +K + +
Sbjct: 194 RQAMLFSATMPDPIITLARTFMNQPTHIRAESPQSSATHDTTAQFAYRAHALDKVEMVSR 253
Query: 428 LIEENDGKRILVFVETKRNADFIA 499
+++ ++F TKR A +A
Sbjct: 254 ILQAEGRGATMIFTRTKRTAQKVA 277
>UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 637
Score = 89.8 bits (213), Expect = 7e-17
Identities = 39/77 (50%), Positives = 57/77 (74%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
S++ G Q R++A+++FK+GK +L+AT VA RGLDI ++ VVN+D P SI++Y HR
Sbjct: 406 STLFGTMKQERRDQAMKDFKAGKTPVLIATDVAGRGLDIAGLEYVVNWDFPGSIEQYRHR 465
Query: 709 IGRTGRVGNRGKAVSFY 759
+GR GR G RG A+SF+
Sbjct: 466 VGRAGRQGKRGAALSFF 482
Score = 44.8 bits (101), Expect = 0.003
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 9 VLKVAVAYGGTAVRHQGDNIARG---CHILVATPGRLHDFVERNRVSFGSVRFVVLDEAD 179
V VAV YGG + Q + + + +++ TPGRL+ +E + + +VLDEAD
Sbjct: 209 VRSVAV-YGGVSQEDQEEALGQHTSHAFLVIGTPGRLNAVLESGALKLDRCKILVLDEAD 267
Query: 180 RMLDMGFMPSIEKM 221
RML +GF + K+
Sbjct: 268 RMLALGFEEQLLKI 281
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 89.8 bits (213), Expect = 7e-17
Identities = 40/91 (43%), Positives = 62/91 (68%)
Frame = +1
Query: 484 CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
C + + + E ++ + +H R Q +RE AL+ FK K+ +L+AT VA+RG+ + V V
Sbjct: 694 CDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVASRGIHVDGVTHV 753
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+N+D+PK+I++Y HRIGRTGR G+ G A SF
Sbjct: 754 INFDIPKNIEDYTHRIGRTGRAGSAGLASSF 784
Score = 68.1 bits (159), Expect = 3e-10
Identities = 26/70 (37%), Positives = 45/70 (64%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
+V GG ++ Q +++GC I++ATPGRL+D +E+ + ++VLDEAD M+D+
Sbjct: 519 RVVSLVGGQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDL 578
Query: 195 GFMPSIEKMM 224
GF P + ++
Sbjct: 579 GFEPQVTSVL 588
Score = 52.8 bits (121), Expect = 1e-05
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEV-TKYEKRNSLKQL 430
R T++FSAT P ++ L+ ++L + +G G + Q I V ++ +K+ L QL
Sbjct: 616 RTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQL 675
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSH 529
I++ I++FV K++ D IA +L S+
Sbjct: 676 IKDGPPPPIIIFVNKKKHCDIIAPVLEECRVSY 708
>UniRef50_A4V6M8 Cluster: Nucleolar RNA helicase II/Gu protein; n=2;
Dugesia japonica|Rep: Nucleolar RNA helicase II/Gu
protein - Dugesia japonica (Planarian)
Length = 627
Score = 89.8 bits (213), Expect = 7e-17
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
+HGD Q +RE L+ F+ GK+ +LV T VAARGLD+ ++D+V+ PK +++Y+HR G
Sbjct: 329 LHGDVPQEKRELVLKKFREGKYSVLVTTNVAARGLDVPDIDLVIQCHPPKDVEDYIHRSG 388
Query: 715 RTGRVGNRGKAVSFYD 762
RTGR G +G + FY+
Sbjct: 389 RTGRAGRKGVCICFYE 404
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LKV YGG + Q + G I+ PGR+ D + + + + +V+LDE DRMLD
Sbjct: 147 LKVLSIYGGVSYEKQTTALKNGVDIIAGAPGRVRDLINKGHLDLSKIEYVILDEVDRMLD 206
Query: 192 MGFMPSIEKMMLHPTMVETTK 254
MGF +E+++ + ET K
Sbjct: 207 MGFSDIVEEILSYIYPSETDK 227
Score = 37.5 bits (83), Expect = 0.42
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGG--ASTDVEQIFIEVTKYEKRNSLKQ 427
QTL+FSAT P I ++ ++L + + V + G A++ VE + I+ E+ ++
Sbjct: 231 QTLLFSATMPNWIHNIVKKYLKPDAIKVCLIDENGSKAASTVEHLAIQCPWRERAGTIPD 290
Query: 428 LIEENDG---KRILVFVETKRNADFIAA 502
+I + G R ++F E K++AD +A+
Sbjct: 291 IIRVHGGGNQARCIIFCERKKDADELAS 318
>UniRef50_A7TRT2 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 605
Score = 89.8 bits (213), Expect = 7e-17
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
E +++HG + Q +RE +L ++G+ I++AT VAARG+DI NV +VVNY + S
Sbjct: 469 ETNFKVTTLHGSKSQDQREYSLNLLRTGRVQIMIATNVAARGIDIPNVGLVVNYQISDSF 528
Query: 691 DEYVHRIGRTGRVGNRGKAVSF 756
++Y+HRIGRTGR G G A+SF
Sbjct: 529 EDYIHRIGRTGRAGKEGTAISF 550
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/64 (40%), Positives = 42/64 (65%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG ++ ++++GC ILVATPGRL D +E + + +V +VLDEAD+M+D GF +
Sbjct: 307 GGHSIEEISYDLSKGCDILVATPGRLIDCLESHLIVIDNVNTIVLDEADKMIDFGFEDQV 366
Query: 213 EKMM 224
++
Sbjct: 367 TTIL 370
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 89.8 bits (213), Expect = 7e-17
Identities = 37/79 (46%), Positives = 57/79 (72%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
L ++SIH ++ Q ER E L+ G + ++V+T + RGLD+ NV +VVN+D+P S+DEY
Sbjct: 440 LSSTSIHSEKSQVERREILKGLLEGDYEVVVSTGILGRGLDLVNVKLVVNFDMPSSLDEY 499
Query: 700 VHRIGRTGRVGNRGKAVSF 756
VH++GR GR+G G A++F
Sbjct: 500 VHQVGRVGRLGQNGTAITF 518
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 89.4 bits (212), Expect = 1e-16
Identities = 40/87 (45%), Positives = 57/87 (65%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
+ H+ Q + IHG+R Q R EAL FK+GK+ +LVAT +AARG+D+ + VVN+D
Sbjct: 257 AEHLVRQGIKAERIHGNRSQGRRTEALAGFKAGKYRVLVATDIAARGIDVTELGHVVNFD 316
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+P D+Y+HR+GRT R G A +F
Sbjct: 317 VPLVPDDYIHRVGRTARAEATGDAFTF 343
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/73 (41%), Positives = 42/73 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ A +GG ++R Q RG +L+ TPGRL D + +VLDEADRMLD
Sbjct: 99 ISAAAVFGGVSIRPQEHAFRRGVDVLIGTPGRLLDHFRAPYAKLAGLEHLVLDEADRMLD 158
Query: 192 MGFMPSIEKMMLH 230
MGF+P I +++ H
Sbjct: 159 MGFLPDIRRILKH 171
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/85 (34%), Positives = 40/85 (47%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTL FSAT P I LA L N V + + + + Q V + K L L+
Sbjct: 176 RQTLFFSATMPAPIGVLAREMLRNPATVNINRIAAPAAGITQAVYPVAQELKAALLVALL 235
Query: 434 EENDGKRILVFVETKRNADFIAAML 508
+ +D + LVF TK A+ +A L
Sbjct: 236 KRDDIRDALVFTRTKHRANRLAEHL 260
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 89.4 bits (212), Expect = 1e-16
Identities = 39/81 (48%), Positives = 56/81 (69%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HGD QRER+ + F+ G ILVAT +AARGLDI+ V V N+D+P+ +D Y+HR+
Sbjct: 270 ALHGDMSQRERDHVMHGFRQGNTKILVATDLAARGLDIELVTHVFNFDIPEDLDSYIHRV 329
Query: 712 GRTGRVGNRGKAVSFYDLIRI 774
GRTGR G G A++ + +I
Sbjct: 330 GRTGRAGRSGIAITLVEPTQI 350
Score = 73.3 bits (172), Expect = 7e-12
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++V YGG ++ Q ++ R I+V TPGRL D + R +S +++VVLDEAD MLD
Sbjct: 100 IQVLAIYGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLD 159
Query: 192 MGFMPSIEKMM 224
MGF+P I+K++
Sbjct: 160 MGFLPDIQKIL 170
Score = 57.2 bits (132), Expect = 5e-07
Identities = 35/120 (29%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQT +FSAT P++++ L +F+ + + ++EQ + +V K +L ++
Sbjct: 176 ERQTFLFSATLPDEVRELGTKFMKQPEIILIESPERTVPEIEQYYYQVNSRRKIETLCRI 235
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL---RVGNT 601
I+ L+F TKRNAD +A +L + A+ ++S R+R ++ R GNT
Sbjct: 236 IDAQQPPISLIFCRTKRNADELARVLTSRG---YNADALHGDMSQRERDHVMHGFRQGNT 292
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 89.4 bits (212), Expect = 1e-16
Identities = 40/96 (41%), Positives = 61/96 (63%)
Frame = +1
Query: 469 RNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIK 648
R + C+ S +A + +++ G+ Q++RE+ L K GK I++AT VAARG+DI+
Sbjct: 252 RTRVECQFLSEKLAARGYAATALSGEVAQKQREDILSAMKKGKLDIIIATDVAARGIDIE 311
Query: 649 NVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
+ V+N+D+P + Y HRIGRTGR G GKA+ F
Sbjct: 312 RITHVINWDIPGDVSTYTHRIGRTGRAGRSGKAILF 347
Score = 56.0 bits (129), Expect = 1e-06
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG +R+Q + + ++V TPGR+ D + R + ++ +VLDEAD ML MGF+
Sbjct: 109 YGGADMRNQLRALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIED 168
Query: 210 IEKMMLH 230
I+ ++ H
Sbjct: 169 IDWILEH 175
Score = 45.2 bits (102), Expect = 0.002
Identities = 26/112 (23%), Positives = 55/112 (49%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
++QT +FSAT P I+ + ++ + + + + +EQ+ +K + L ++
Sbjct: 179 DKQTALFSATMPHQIKRITDQYQKDPVKIEIKASHSELQQIEQLVWRARGLDKLDGLTRI 238
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+E D I++FV T+ F++ L + TA++ V+ ++R IL
Sbjct: 239 LEIEDWNAIIIFVRTRVECQFLSEKLAARGYA---ATALSGEVAQKQREDIL 287
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 89.4 bits (212), Expect = 1e-16
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++IHG++ Q +R+ AL F+ GK ILVAT VAARG+DI V V+NY+LP ++YVHR
Sbjct: 278 NAIHGNKSQPQRQRALDEFRRGKTMILVATDVAARGIDIPGVSHVLNYELPNVPEQYVHR 337
Query: 709 IGRTGRVGNRGKAVSF 756
IGRT R G G A++F
Sbjct: 338 IGRTARAGKDGVAIAF 353
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/70 (45%), Positives = 48/70 (68%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LKV GGT+V + + RG IL+ATPGRL D +++ + GSV +VLDEAD+MLD
Sbjct: 104 LKVQSIVGGTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLD 163
Query: 192 MGFMPSIEKM 221
+GF+ ++ ++
Sbjct: 164 LGFVHALRRI 173
Score = 51.2 bits (117), Expect = 3e-05
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTL FSAT P+ I+ L + NN + V+V + ++Q V + EK++ L+ +
Sbjct: 180 ERQTLFFSATMPKAIKELVSGYCNNPVQVSVTPESTTAERIDQYLFMVQQDEKQSLLELI 239
Query: 431 IE-----ENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
+ + +RIL+F TK AD + L + + AI N S +R R L
Sbjct: 240 LSGRHKVPGEFERILIFTRTKHGADRVVKKLSRAG---IPANAIHGNKSQPQRQRAL 293
>UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 57 - Arabidopsis thaliana (Mouse-ear cress)
Length = 541
Score = 89.4 bits (212), Expect = 1e-16
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH D ERE A+ F++G+ +L+AT V ARG+D K ++ V+NYD P S Y+HRIG
Sbjct: 410 IHSDLPPGERENAVDQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIG 469
Query: 715 RTGRVGNRGKAVSFY 759
R+GR G G+A++FY
Sbjct: 470 RSGRAGRSGEAITFY 484
Score = 39.9 bits (89), Expect = 0.079
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 266 MFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQLIEEN 442
+FSAT P+ ++ LA +++ + V +G AS V+Q + E K +L+Q E+
Sbjct: 319 LFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVFAGSEEGKLLALRQSFAES 378
Query: 443 DGKRILVFVETKRNADFIAAMLRNSN 520
+L+FV++K A + L+ N
Sbjct: 379 LNPPVLIFVQSKERAKELYDELKCEN 404
Score = 39.1 bits (87), Expect = 0.14
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +3
Query: 78 CHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIE 215
C +L++TP RL ++ ++ V ++VLDE+D++ + + I+
Sbjct: 259 CDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKLFEQSLLKQID 304
>UniRef50_Q5KHB7 Cluster: ATP-dependent RNA helicase DBP3; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP3 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 605
Score = 89.4 bits (212), Expect = 1e-16
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HGD Q R +AL+ FK+G+ +LVAT VAARGLDI +V +V+N P + +++VHR
Sbjct: 468 ALHGDMTQEARFKALEAFKTGQQNVLVATDVAARGLDIPDVGLVINVTFPLTTEDFVHRC 527
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G GKAV+F+
Sbjct: 528 GRTGRAGKTGKAVTFF 543
Score = 54.8 bits (126), Expect = 3e-06
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIA-RGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRML 188
LK +GG Q ++ + ++V TPGR D + + SV ++VLDEADRML
Sbjct: 283 LKSVCIFGGVGKDGQARELSQKDTRVVVGTPGRTLDLADSGELDLSSVSYLVLDEADRML 342
Query: 189 DMGFMPSIEKMMLH 230
D GF I +++ H
Sbjct: 343 DAGFENDIRRIIAH 356
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Frame = +2
Query: 239 GGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEV 394
G RQT+MFSAT+PE ++ LA FLNN L + VG A+ +EQI +EV
Sbjct: 359 GHKEGRQTVMFSATWPESVRRLASTFLNNPLRITVGSDELSANKRIEQI-VEV 410
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T++IHG+R Q +RE AL+ F+ G +LVAT VAARG+DI +V V N+DLP + +VH
Sbjct: 341 TAAIHGNRSQGQRERALKAFREGTLKVLVATDVAARGIDIPDVRFVYNFDLPNVPENFVH 400
Query: 706 RIGRTGRVGNRGKAVSF 756
RIGRT R G G+AV+F
Sbjct: 401 RIGRTARAGRDGQAVAF 417
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/73 (46%), Positives = 48/73 (65%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
GS LK+ V GG A+ Q RG ++VATPGRL D ++R + RF+VLDEAD+
Sbjct: 170 GSHLKLQVIVGGVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQ 229
Query: 183 MLDMGFMPSIEKM 221
MLD+GF+ ++ K+
Sbjct: 230 MLDLGFIHALRKI 242
Score = 48.8 bits (111), Expect = 2e-04
Identities = 36/113 (31%), Positives = 55/113 (48%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQT++FSAT P+ ++ L+ +L + V V G + + Q V + K L L
Sbjct: 249 ERQTMLFSATMPKQMEELSRAYLTDPARVEVAPPGKIADKITQSVHFVEQGAKTQLLIDL 308
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILR 589
+ + + LVF TK AD +A L N+ + AI N S +R R L+
Sbjct: 309 LGNHRDELALVFSRTKHGADRLARKLSNAG---FETAAIHGNRSQGQRERALK 358
>UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein;
n=19; Alteromonadales|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 487
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +1
Query: 538 HGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGR 717
HGD+ Q R L +FK+GK +LVAT VAARGLDI+ + +V+N +LP ++YVHRIGR
Sbjct: 293 HGDKTQGARNRVLDDFKAGKLRVLVATDVAARGLDIQALPLVINLELPFLAEDYVHRIGR 352
Query: 718 TGRVGNRGKAVSF 756
TGR G G+A+SF
Sbjct: 353 TGRAGLSGRAISF 365
Score = 69.3 bits (162), Expect = 1e-10
Identities = 33/70 (47%), Positives = 44/70 (62%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK YGG + Q + +G ILVATPGRL D + + + SV +V+DEADRMLD
Sbjct: 122 LKTLAVYGGANMNPQRKGVEQGVDILVATPGRLFDIIGQFHLDLSSVTTLVIDEADRMLD 181
Query: 192 MGFMPSIEKM 221
+GF+ IEK+
Sbjct: 182 LGFVRDIEKV 191
Score = 54.0 bits (124), Expect = 5e-06
Identities = 30/82 (36%), Positives = 48/82 (58%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
E QT++FSAT+ + ++ L+ + LN +V V AST VEQ+ V K K L +L
Sbjct: 198 EHQTMLFSATYSDAVKQLSHKMLNQPEWVNVAENTTAST-VEQLVYRVDKRRKAELLSEL 256
Query: 431 IEENDGKRILVFVETKRNADFI 496
+ N+ +++LVF TK A+ +
Sbjct: 257 VGRNNWRQVLVFASTKECAEHL 278
>UniRef50_Q6CDS6 Cluster: ATP-dependent RNA helicase ROK1; n=1;
Yarrowia lipolytica|Rep: ATP-dependent RNA helicase ROK1
- Yarrowia lipolytica (Candida lipolytica)
Length = 547
Score = 89.0 bits (211), Expect = 1e-16
Identities = 36/75 (48%), Positives = 53/75 (70%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IHGD +R + F++G+ +L+ T V ARG+D + +++V+NYD+P+S YVHRIG
Sbjct: 394 IHGDMTAAKRASVIDRFRNGEVWVLICTDVLARGIDFRGINLVINYDVPQSAQSYVHRIG 453
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G GKAV+F+
Sbjct: 454 RTGRAGRLGKAVTFF 468
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
I + TP RL + + GS+ V+ DEAD++ + GF ++ ++
Sbjct: 244 ICITTPLRLVSALNDGSLDLGSLDLVIFDEADKLFEKGFATQVDDIL 290
>UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Phaeosphaeria nodorum|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 1149
Score = 89.0 bits (211), Expect = 1e-16
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
++IHG + Q +R EA+ FK G IL+AT+VAARGLD+ + +V N+D P +++YVHR
Sbjct: 791 NTIHGAKDQTDRNEAINEFKQGLLNILIATSVAARGLDVPGLALVYNFDCPTHLEDYVHR 850
Query: 709 IGRTGRVGNRGKAVSFYD 762
GRTGR GN+G AV+ +
Sbjct: 851 CGRTGRAGNKGLAVTLIE 868
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARG-CHILVATPGRLHDFVERNR---VSFGSVRFVVLDE 173
S + + AYGG + Q I RG HIL AT GRL D ++ N +SF + +VVLDE
Sbjct: 609 SGITIKCAYGGQPISDQIAMIKRGGIHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDE 668
Query: 174 ADRMLDMGFMPSIEKMM 224
ADRM DMGF P + K++
Sbjct: 669 ADRMFDMGFEPQVMKIL 685
Score = 43.2 bits (97), Expect = 0.008
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ-IFIEVTKYEKR----- 412
+RQT++FSATFP+ + LA + L+ V +G + ++ Q I I YEK+
Sbjct: 691 DRQTILFSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITIVPPSYEKKIAKLL 750
Query: 413 NSLKQLIEENDGKRILVFVETKRNADFIAAML 508
+ L Q +++ ++L+F E + A+ + + L
Sbjct: 751 HHLGQTFSDDENAQVLIFTERQETAEDLLSKL 782
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 89.0 bits (211), Expect = 1e-16
Identities = 41/99 (41%), Positives = 65/99 (65%)
Frame = +1
Query: 457 LGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARG 636
L C+ K + +S + + +IHGD Q +RE+ ++ FK K IL+AT V +RG
Sbjct: 242 LVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQKKIRILIATDVMSRG 301
Query: 637 LDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+D+ +++ V+NY LP++ + Y+HRIGRTGR G +GKA+S
Sbjct: 302 IDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAIS 340
Score = 64.1 bits (149), Expect = 4e-09
Identities = 29/71 (40%), Positives = 48/71 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
LK+A YGG A+ Q + + +I+V TPGR+ D + R ++ +V++ +LDEAD ML+
Sbjct: 103 LKIAKIYGGKAIYPQIKAL-KNANIVVGTPGRILDHINRGTLNLKNVKYFILDEADEMLN 161
Query: 192 MGFMPSIEKMM 224
MGF+ +EK++
Sbjct: 162 MGFIKDVEKIL 172
Score = 56.4 bits (130), Expect = 8e-07
Identities = 34/114 (29%), Positives = 70/114 (61%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+++ L+FSAT P +I +LA +++ +Y F+ I + ++EQ ++EV + E+ +L +L
Sbjct: 178 DKRILLFSATMPREILNLAKKYMGDYSFIKAKI----NANIEQSYVEVNENERFEALCRL 233
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILRV 592
++ + LVF +TKR+ +A+MLR+ + AI ++S +R +++R+
Sbjct: 234 LKNKEFYG-LVFCKTKRDTKELASMLRDIG---FKAGAIHGDLSQSQREKVIRL 283
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 88.6 bits (210), Expect = 2e-16
Identities = 35/76 (46%), Positives = 56/76 (73%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
S++HGD Q+ER+ ++ F+SG +L+ T + ARG+D++ V +V+NYDLP + + Y+HR
Sbjct: 260 SALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 319
Query: 709 IGRTGRVGNRGKAVSF 756
IGR GR G +G A++F
Sbjct: 320 IGRGGRFGRKGVAINF 335
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/97 (40%), Positives = 63/97 (64%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
CR K + + +A ++ +IHG+ Q RE+ L+ FK + +LVAT +AARG+D+
Sbjct: 148 CRTKIAAKRLAKQLAGFDVVAGAIHGNLNQESREKVLRGFKKNRINLLVATDIAARGIDV 207
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
K++D +++Y LP++ ++Y HR GRT R G G +VSF
Sbjct: 208 KDLDYIIHYRLPENAEQYTHRSGRTARAGKSGISVSF 244
Score = 64.5 bits (150), Expect = 3e-09
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +3
Query: 30 YGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
YGG + Q + R H++VATPGRL D + R +S ++++VLDEAD M++MGF
Sbjct: 5 YGGAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKAE 64
Query: 210 IEKMM 224
I++++
Sbjct: 65 IDEIL 69
>UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=18;
Alphaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Jannaschia sp. (strain CCS1)
Length = 644
Score = 88.6 bits (210), Expect = 2e-16
Identities = 43/96 (44%), Positives = 56/96 (58%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C K + + + + L IHGD Q R L F+ G +LVA+ VAARGLDI
Sbjct: 268 CNRKVDVDIVAKSLKKHNLNAEPIHGDLDQSHRMRTLAGFRDGSITLLVASDVAARGLDI 327
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
NV V+NYD+P ++YVHRIGRTGR G G A++
Sbjct: 328 PNVSHVINYDVPSHAEDYVHRIGRTGRAGKTGVAIT 363
Score = 72.1 bits (169), Expect = 2e-11
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L A+ GG + + Q I +G +L+ATPGRL D ER ++ V+ +V+DEADRMLD
Sbjct: 111 LTKALLIGGVSFKEQEQAIDKGVDVLIATPGRLLDHFERGKLILNDVKVMVVDEADRMLD 170
Query: 192 MGFMPSIEKM 221
MGF+P IE++
Sbjct: 171 MGFIPDIERI 180
Score = 37.9 bits (84), Expect = 0.32
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIE-------VTKYEKR 412
RQTL FSAT +I+ + FL+N + V S +EQ IE KR
Sbjct: 188 RQTLFFSATMAPEIERITNTFLSNPEKIEVERQSTTSATIEQRLIEFKAPRRDAQAKMKR 247
Query: 413 NSLKQLI-EENDG-KRILVFVETKRNADFIAAMLRNSN 520
+ L+ I E D + ++F K + D +A L+ N
Sbjct: 248 DMLRAAITAEGDAFRNAIIFCNRKVDVDIVAKSLKKHN 285
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/103 (42%), Positives = 65/103 (63%)
Frame = +1
Query: 445 W*KNLGICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAV 624
W + L R K + ++ + L ++IHG++ Q R +AL +FK+ +LVAT +
Sbjct: 249 WEQVLVFTRTKHGANRLAEYLEKHGLTAAAIHGNKSQNARTKALADFKANTVRVLVATDI 308
Query: 625 AARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
AARGLDI + VVN++LP ++YVHRIGRTGR G G+A+S
Sbjct: 309 AARGLDIDQLPHVVNFELPNVEEDYVHRIGRTGRAGRSGEAIS 351
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +3
Query: 21 AVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGF 200
A +GG + Q +A+G +LVA PGRL D + V V +VLDEADRMLDMGF
Sbjct: 111 ACIFGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGF 170
Query: 201 MPSIEKMM 224
+ ++K++
Sbjct: 171 IHDVKKVL 178
Score = 47.6 bits (108), Expect = 4e-04
Identities = 37/112 (33%), Positives = 51/112 (45%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ L+FSATF +DI LA + L+N + V +EQ + KR L L
Sbjct: 184 KRQNLLFSATFSKDITDLADKLLHNPERIEVTPPNTTVERIEQRVYRLPASHKRALLAHL 243
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
I +++LVF TK A+ +A L L AI N S R + L
Sbjct: 244 ITLGAWEQVLVFTRTKHGANRLAEYLEKHG---LTAAAIHGNKSQNARTKAL 292
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/96 (45%), Positives = 58/96 (60%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
CR K +H+ Q S +HGD Q++RE ++ FK G I VAT VAARGLD+
Sbjct: 243 CRMKKEVDRLVAHLTAQGFKVSGLHGDMEQKQREVTIRAFKQGGIDIFVATDVAARGLDV 302
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
+V V NY +P + YVHRIGRTGR G G+A++
Sbjct: 303 NDVTHVFNYHIPFDSESYVHRIGRTGRAGKTGEAIT 338
Score = 63.7 bits (148), Expect = 6e-09
Identities = 35/72 (48%), Positives = 44/72 (61%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S LK A YGGTA Q + I + I+VATPGRL D + ++ FVVLDEAD M
Sbjct: 95 SGLKTATVYGGTAYGKQIERIKQAS-IVVATPGRLQDLLMSGKIKLNP-HFVVLDEADEM 152
Query: 186 LDMGFMPSIEKM 221
LDMGF+ I+ +
Sbjct: 153 LDMGFLDEIKNI 164
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/86 (33%), Positives = 50/86 (58%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTLMFSAT P I+ LA + LNN V++ ++ + Q + V + E+ ++L +L
Sbjct: 171 ERQTLMFSATMPNGIRKLAEQILNNPKTVSITKSESTNSKITQYYYVVQERERDDALVRL 230
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
I+ + ++ ++F K+ D + A L
Sbjct: 231 IDYKNPEKCIIFCRMKKEVDRLVAHL 256
>UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subunit
family protein; n=1; Tetrahymena thermophila SB210|Rep:
Type III restriction enzyme, res subunit family protein
- Tetrahymena thermophila SB210
Length = 668
Score = 88.6 bits (210), Expect = 2e-16
Identities = 34/75 (45%), Positives = 55/75 (73%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
I D+ + EREE +++F++GK L+ T + ARG+D K V++V+NYD P ++ Y+HR+G
Sbjct: 488 IDSDKQKEEREEVIEDFRTGKLWALICTDLMARGIDFKGVNLVINYDFPTTMINYIHRVG 547
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G G+A++F+
Sbjct: 548 RTGRAGRTGRAITFF 562
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +2
Query: 263 LMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ-IFIEVTKYEKRNSLKQLIEE 439
L+FSAT ++ L + + L + +G +EQ + ++Y K LK +I
Sbjct: 391 LLFSATIQHPVEELVKNIIVDPLKLQIGGKNNVLASIEQSLSYCQSEYGKLVELKNIINN 450
Query: 440 ND-GKRILVFVETKRNADFIAAMLRNS 517
+ +L+FV++K + + +M+++S
Sbjct: 451 GEFNPPVLIFVQSKERGEELLSMIKSS 477
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 88.6 bits (210), Expect = 2e-16
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHGD+ Q ER A++ F G +LVAT VA++GLD ++ V+N+D+P+ I+ YVHRI
Sbjct: 327 AIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVHRI 386
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G A +F
Sbjct: 387 GRTGRCGKTGVATTF 401
Score = 70.9 bits (166), Expect = 4e-11
Identities = 29/63 (46%), Positives = 46/63 (73%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ + GG++++ Q D + RG H++VATPGRL D +++ ++ R++VLDEADRM+D
Sbjct: 158 LRTNLCIGGSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMID 217
Query: 192 MGF 200
MGF
Sbjct: 218 MGF 220
Score = 45.6 bits (103), Expect = 0.002
Identities = 31/82 (37%), Positives = 42/82 (51%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSAT P+ IQ+ A L + V VG G AS DV Q +E K E +
Sbjct: 234 QRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASLDVIQ-EVEYVKQEAKVVYLLE 292
Query: 431 IEENDGKRILVFVETKRNADFI 496
+ +L+F E K + D I
Sbjct: 293 CLQKTPPPVLIFAEKKSDVDDI 314
>UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n=1;
Plasmodium vivax|Rep: ATP-dependent RNA helicase,
putative - Plasmodium vivax
Length = 1341
Score = 88.6 bits (210), Expect = 2e-16
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T +HG + Q +RE LQ FK GK+ IL+AT+V ARG+DIK++ +V+NY+ P +++Y+H
Sbjct: 943 TLVLHGGQDQADREFTLQTFKEGKNKILIATSVMARGIDIKDIIVVINYECPDHLEDYIH 1002
Query: 706 RIGRTGRVGNRGKAVSF 756
R+GRTGR G A +F
Sbjct: 1003 RVGRTGRSNKIGYAYTF 1019
Score = 59.7 bits (138), Expect = 9e-08
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR---VSFGSVRFVVLDEADR 182
L++ YGG+ + Q + + RG ILV TPGR+ D + + + V FVVLDEADR
Sbjct: 771 LRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADR 830
Query: 183 MLDMGFMPSIEKMM 224
+LD+GF I ++
Sbjct: 831 LLDLGFESQIHNIL 844
Score = 46.0 bits (104), Expect = 0.001
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKR--NSLK 424
++QT M SATFP IQ+LA + L + + VG G + ++ Q F+EV + K+ LK
Sbjct: 850 DKQTAMISATFPNYIQNLAKKLLYKPIEIIVGEKGKTNNNIYQ-FVEVLEGGKKIYRLLK 908
Query: 425 QLIEENDGKRILVFVETKRNADFI 496
L E + IL+FV + AD +
Sbjct: 909 LLGEWSSYGLILIFVNRQLEADLL 932
>UniRef50_Q4P559 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1448
Score = 88.6 bits (210), Expect = 2e-16
Identities = 34/75 (45%), Positives = 53/75 (70%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH +R + +RE + FK G +L+ T + ARG+D K V +V+NYD P+S+ Y+HRIG
Sbjct: 1273 IHSERPKLQRERVISAFKRGDIWVLICTELMARGIDFKGVQLVINYDFPQSVQSYIHRIG 1332
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G +G+A++++
Sbjct: 1333 RTGRAGKQGRAITYF 1347
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
+L+ TP RL +E+ +V +VR +VLDEADR+L+ GF+ + ++
Sbjct: 1123 VLITTPLRLVHAIEKEQVELSNVRHLVLDEADRLLEDGFLQQTDSIL 1169
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 88.6 bits (210), Expect = 2e-16
Identities = 38/87 (43%), Positives = 58/87 (66%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
SS + + L +HG Q +R++ + F+ G+ IL+AT VAARG+D++ +D+V N+D
Sbjct: 260 SSALKAEGFLADGLHGGMAQAQRDKVMNAFRKGQLEILIATDVAARGIDVEEIDLVCNFD 319
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSF 756
P+ + YVHRIGRT R G G+A+SF
Sbjct: 320 FPQDDEYYVHRIGRTARAGRTGRAISF 346
Score = 68.9 bits (161), Expect = 1e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ + YGG + Q ++RG I++ TPGR+ D ++R + +V VVLDEAD+MLD
Sbjct: 102 ISILPVYGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLD 161
Query: 192 MGFMPSIEKMMLH 230
MGF IE+++ H
Sbjct: 162 MGFREDIEEILSH 174
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/87 (31%), Positives = 50/87 (57%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQT++ SATFP +I ++ RF N + V + +EQ +IEV + K ++L ++
Sbjct: 178 ERQTVILSATFPPEILDISRRFQKNPIDVKMVHQELTVPQIEQYYIEVREPAKADTLIRV 237
Query: 431 IEENDGKRILVFVETKRNADFIAAMLR 511
+E +R ++F T+ D +++ L+
Sbjct: 238 LEFYQPQRTIIFCNTQIAVDAVSSALK 264
>UniRef50_P45818 Cluster: ATP-dependent RNA helicase ROK1; n=11;
Saccharomycetales|Rep: ATP-dependent RNA helicase ROK1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 564
Score = 88.6 bits (210), Expect = 2e-16
Identities = 38/75 (50%), Positives = 53/75 (70%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH +R +R+ ++ FK+G+ L+ T V ARG+D K V++V+NYD+P S YVHRIG
Sbjct: 402 IHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVINYDVPGSSQAYVHRIG 461
Query: 715 RTGRVGNRGKAVSFY 759
RTGR G GKA++FY
Sbjct: 462 RTGRGGRSGKAITFY 476
Score = 39.9 bits (89), Expect = 0.079
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +2
Query: 266 MFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQLIEEN 442
MFSAT P +++ +A + + + V +G A+T++EQ I E K +++QL++E
Sbjct: 310 MFSATIPSNVEEIAQSIMMDPVRVIIGHKEAANTNIEQKLIFCGNEEGKLIAIRQLVQEG 369
Query: 443 DGK-RILVFVET 475
+ K I++F+E+
Sbjct: 370 EFKPPIIIFLES 381
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
I+++TP RL D V+ + V+ ++ DEAD++ D F+ + ++
Sbjct: 252 IIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDKTFVEQSDDIL 298
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 88.6 bits (210), Expect = 2e-16
Identities = 45/90 (50%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Frame = +1
Query: 496 SSHVAEQQ----LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
++H+AEQ + +++IHG++ Q R AL +FKSG +LVAT +AARGLDI+ + V
Sbjct: 258 ANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHV 317
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
VNY+LP ++YVHRIGRTGR G+A+S
Sbjct: 318 VNYELPNVPEDYVHRIGRTGRAAATGEALS 347
Score = 66.5 bits (155), Expect = 8e-10
Identities = 31/71 (43%), Positives = 44/71 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++ V +GG ++ Q + G +LVATPGRL D +N V V +VLDEADRMLD
Sbjct: 104 IRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLD 163
Query: 192 MGFMPSIEKMM 224
MGF+ I +++
Sbjct: 164 MGFIHDIRRVL 174
Score = 60.9 bits (141), Expect = 4e-08
Identities = 42/112 (37%), Positives = 59/112 (52%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ L+FSATF +DI+ LA + L+N L + V AS V Q V K KR L +
Sbjct: 180 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHM 239
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRIL 586
I + + +++LVF TK A+ +A L N ++ AI N S R R L
Sbjct: 240 IGKGNWQQVLVFTRTKHGANHLAEQL---NKDGIRSAAIHGNKSQGARTRAL 288
>UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;
n=8; Viridiplantae|Rep: DEAD-box ATP-dependent RNA
helicase 21 - Arabidopsis thaliana (Mouse-ear cress)
Length = 733
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+++HG + Q +RE +L+ F++ ++ +LVAT V RG+DI +V V+NYD+PK I+ Y HR
Sbjct: 604 TTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHR 663
Query: 709 IGRTGRVGNRGKAVSFYDL 765
IGRTGR G G A SF L
Sbjct: 664 IGRTGRAGKSGVATSFLTL 682
Score = 72.1 bits (169), Expect = 2e-11
Identities = 32/66 (48%), Positives = 42/66 (63%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
+V GG ++ QG I +GC I++ATPGRL D +ER +VVLDEADRM+DM
Sbjct: 419 RVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDM 478
Query: 195 GFMPSI 212
GF P +
Sbjct: 479 GFEPQV 484
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/85 (38%), Positives = 49/85 (57%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
R T MFSAT P ++ LA ++L N + V +G G + + Q I + + EK L++L+
Sbjct: 512 RTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLL 571
Query: 434 EENDGKRILVFVETKRNADFIAAML 508
+E K +VFV TK+N D IA L
Sbjct: 572 DELGEKTAIVFVNTKKNCDSIAKNL 596
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 88.6 bits (210), Expect = 2e-16
Identities = 37/79 (46%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCI--LVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
+IHG + Q +R+ A++ F + I L+AT++AARGLD++N+D+VVN++ P +++YVH
Sbjct: 673 AIHGGKDQIDRKHAIREFSDDQSGINVLIATSIAARGLDVRNLDLVVNFEPPSHLEDYVH 732
Query: 706 RIGRTGRVGNRGKAVSFYD 762
R+GRTGR G G+A++F D
Sbjct: 733 RVGRTGRAGKHGEAITFVD 751
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVR---FVVLDEADR 182
LKV YGG+ + +Q + RG +++VATPGRL D + N ++R FVVLDEADR
Sbjct: 490 LKVCCCYGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADR 549
Query: 183 MLDMGFMPSIEKM 221
M DMGF P I+K+
Sbjct: 550 MFDMGFEPQIQKI 562
Score = 47.6 bits (108), Expect = 4e-04
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 11/97 (11%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ--IFIEVTKYEKRNSLK 424
++QT++FSATFP ++ LA + L+N + + VG V ++++ Q I E T + ++
Sbjct: 569 DKQTVLFSATFPRKLEQLAKKVLHNPIEIIVGGVSVVASEISQEIILFEDTDQLMNHKIQ 628
Query: 425 QL---------IEENDGKRILVFVETKRNADFIAAML 508
+L + +N GK +LVFVE + +AD + ++L
Sbjct: 629 KLEDILSRFFDLGKNTGK-VLVFVEKQTDADKLVSVL 664
>UniRef50_Q9Y7T7 Cluster: Pre-mRNA-splicing ATP-dependent RNA
helicase prp28; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-splicing ATP-dependent RNA helicase prp28 -
Schizosaccharomyces pombe (Fission yeast)
Length = 662
Score = 88.6 bits (210), Expect = 2e-16
Identities = 37/75 (49%), Positives = 55/75 (73%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HG + Q +RE A++ ++ ILVAT +A RG+DI NV +V+NY++ KSI++Y HRI
Sbjct: 545 TLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRI 604
Query: 712 GRTGRVGNRGKAVSF 756
GRTGR G G A++F
Sbjct: 605 GRTGRAGKSGTAITF 619
Score = 66.9 bits (156), Expect = 6e-10
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG A Q +++G HI+VATPGRL D +ER +VV+DEADRMLDMGF +
Sbjct: 361 GGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDV 420
Query: 213 EKMM 224
K++
Sbjct: 421 NKIL 424
Score = 50.4 bits (115), Expect = 6e-05
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKR-NSLKQL 430
RQT+MFSAT P + +LA +L + + +G +G A VEQ ++ K+ ++++
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDRVEQRVEMISDDSKKWRRVEEI 509
Query: 431 IEEND-GKRILVFVETKRNADFIAAML 508
+E N I++FV KRN + IA L
Sbjct: 510 LESNRFSPPIIIFVNLKRNIEAIAKQL 536
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 88.6 bits (210), Expect = 2e-16
Identities = 35/76 (46%), Positives = 56/76 (73%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
S++HGD Q+ER+ ++ F+SG +L+ T + ARG+D++ V +V+NYDLP + + Y+HR
Sbjct: 301 SALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 360
Query: 709 IGRTGRVGNRGKAVSF 756
IGR GR G +G A++F
Sbjct: 361 IGRGGRFGRKGVAINF 376
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 33 GGTAVRHQGDNI-ARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPS 209
GGT VR++ + A HI+V TPGR+ D + R +S ++ VLDEAD ML GF
Sbjct: 137 GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQ 196
Query: 210 I 212
I
Sbjct: 197 I 197
Score = 35.5 bits (78), Expect = 1.7
Identities = 20/81 (24%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQLI 433
Q ++ SAT P D+ + +F+ + + + V ++Q +I V + E K ++L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 434 EENDGKRILVFVETKRNADFI 496
E + ++F+ T+R D++
Sbjct: 269 ETLTITQAVIFLNTRRKVDWL 289
>UniRef50_Q9NR30 Cluster: Nucleolar RNA helicase 2; n=51;
Euteleostomi|Rep: Nucleolar RNA helicase 2 - Homo
sapiens (Human)
Length = 783
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/76 (51%), Positives = 52/76 (68%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HGD Q++RE L+ F++G +LVAT VAARGLDI VD+V+ PK ++ Y+HR
Sbjct: 466 SLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLDIPEVDLVIQSSPPKDVESYIHRS 525
Query: 712 GRTGRVGNRGKAVSFY 759
GRTGR G G + FY
Sbjct: 526 GRTGRAGRTGVCICFY 541
Score = 66.9 bits (156), Expect = 6e-10
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L VA YGGT Q + + G ILV TPGR+ D ++ ++ ++ VVLDE D+MLD
Sbjct: 287 LSVACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHIQNGKLDLTKLKHVVLDEVDQMLD 346
Query: 192 MGFMPSIEKMM 224
MGF +E+++
Sbjct: 347 MGFADQVEEIL 357
>UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4;
Clostridiales|Rep: ATP-dependent RNA helicase -
Clostridium tetani
Length = 386
Score = 88.2 bits (209), Expect = 2e-16
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +1
Query: 517 QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDE 696
++ IHG +++R++AL+ F+SGK +LVA+ +AARGLDIKNV + N DLP E
Sbjct: 267 KIKAEGIHGSSSKKDRQKALEGFRSGKLQLLVASDIAARGLDIKNVSHIFNLDLPSDPKE 326
Query: 697 YVHRIGRTGRVGNRGKAVS 753
Y+HR+GRT R G G A+S
Sbjct: 327 YLHRVGRTSRTGETGTAIS 345
Score = 43.6 bits (98), Expect = 0.006
Identities = 16/64 (25%), Positives = 40/64 (62%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
G V+ Q + + H++V + GR+ + +++ ++S +++ +V+DE D++LD + SI
Sbjct: 109 GNANVKRQIEKLKEKPHVIVGSSGRILELIKKKKISAHTIKTIVVDEGDKLLDHSNLSSI 168
Query: 213 EKMM 224
+ ++
Sbjct: 169 KDVI 172
Score = 33.5 bits (73), Expect = 6.8
Identities = 17/87 (19%), Positives = 42/87 (48%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQ ++FSAT E ++A + + F+ + ++ ++ + +K L++L
Sbjct: 178 DRQLMVFSATINEKTLNVAKGLMKDAEFIKAKSENAINPNITHMYFISDQRDKIEVLRKL 237
Query: 431 IEENDGKRILVFVETKRNADFIAAMLR 511
+ + ++ +VF+ + I A L+
Sbjct: 238 VASINPEKAIVFINKSDETEIITAKLK 264
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/74 (55%), Positives = 55/74 (74%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S+HGD+ Q+ERE L+ FK + ++VAT VAARGLDIK++ VVN+ LP + YVHRI
Sbjct: 320 SLHGDKSQQEREATLKKFKQRQVKVIVATDVAARGLDIKDLTHVVNHSLPWDSESYVHRI 379
Query: 712 GRTGRVGNRGKAVS 753
GRTGR G +G A++
Sbjct: 380 GRTGRNGQKGTAIT 393
Score = 79.8 bits (188), Expect = 8e-14
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++V YGG + R Q D I RG HI+VATPGRL DF+E+ + SV+ VVLDEAD ML
Sbjct: 142 VRVVTIYGGASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEMLS 201
Query: 192 MGFMPSIEKMM 224
MGF ++E ++
Sbjct: 202 MGFKEALETIL 212
Score = 42.3 bits (95), Expect = 0.015
Identities = 23/84 (27%), Positives = 43/84 (51%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIE 436
+T +FSAT +++ L +L N V+V VGG + +EQ++ V K + +L++
Sbjct: 228 RTWLFSATMSSEVRRLTSTYLENPETVSVNKVGGTADTIEQVYYTVKNSYKTEVIGRLLQ 287
Query: 437 ENDGKRILVFVETKRNADFIAAML 508
++F +TK +A +L
Sbjct: 288 TLPEFYGIIFCQTKMEVAELADVL 311
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 88.2 bits (209), Expect = 2e-16
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+ E + ++HG+R Q +RE AL F+ G +LVAT +AARG+D+ V V+N+DLP
Sbjct: 270 LTESGITAEALHGNRSQGQRERALNAFREGDVQVLVATDIAARGIDVDTVTHVINHDLPS 329
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFYD 762
+ YVHRIGRTGR G G A++ D
Sbjct: 330 LPESYVHRIGRTGRAGRSGFAITLCD 355
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
++V +GG + HQ + G I+VA PGRL D +E+ + +VLDEAD+MLD
Sbjct: 109 VRVTTIFGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLD 168
Query: 192 MGFMPSIEKMM 224
MGF IE+++
Sbjct: 169 MGFAKPIERIV 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 857,629,687
Number of Sequences: 1657284
Number of extensions: 17943512
Number of successful extensions: 50546
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 46243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50074
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -