Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00843
(845 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 132 3e-33
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 24 1.7
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 23 2.3
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 23 4.0
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 22 7.0
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 22 7.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 7.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 7.0
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 9.3
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 132 bits (320), Expect = 3e-33
Identities = 61/89 (68%), Positives = 76/89 (85%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++ ++EQ + ++SIHGDR Q ERE+AL +FK+G +LVAT VAARGLDIK+V V+NYD
Sbjct: 426 ATFLSEQNIQSTSIHGDRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYD 485
Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
LPKSIDEYVHRIGRTGRVGN+GKA SF+D
Sbjct: 486 LPKSIDEYVHRIGRTGRVGNKGKATSFFD 514
Score = 124 bits (298), Expect = 1e-30
Identities = 56/90 (62%), Positives = 72/90 (80%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTLMFSATFPE++Q LAG+FL NY+F+AVGIVG A TDVEQ F +V+K++KR+ L +
Sbjct: 344 ERQTLMFSATFPEEVQQLAGKFLLNYIFIAVGIVGSACTDVEQKFFQVSKFDKRSKLVSI 403
Query: 431 IEENDGKRILVFVETKRNADFIAAMLRNSN 520
+E+ +R L+FVETKRNADF+A L N
Sbjct: 404 LEKAPNERTLIFVETKRNADFLATFLSEQN 433
Score = 109 bits (261), Expect = 4e-26
Identities = 50/81 (61%), Positives = 60/81 (74%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S +KVAV YGGT+ HQ I GCHILVATPGRL DFV R VSF S+++ VLDEADRM
Sbjct: 262 STVKVAVIYGGTSTNHQRGRILGGCHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRM 321
Query: 186 LDMGFMPSIEKMMLHPTMVET 248
LDMGF+ +E+M+ H +M T
Sbjct: 322 LDMGFLGDVEEMLSHQSMPAT 342
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 514 VPQHGCYEVCITFCFDKYQDSFT 446
+P+H C E C F + +D FT
Sbjct: 273 MPKHACSEYCRVFKMLQEEDIFT 295
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 249 WSPPWLDVTSF 217
WS P LDVTSF
Sbjct: 580 WSDPQLDVTSF 590
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +2
Query: 356 GASTDVEQIFIEVTKYEKRNSLKQLIEENDGK 451
G++ + + IEVTK + + L+QL++ + K
Sbjct: 99 GSNDNSWESLIEVTKTSETSKLQQLVDNIEHK 130
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 21.8 bits (44), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 675 PPKKH**VCAQNRAYWSRRKQRKSCIVL*SDQDLALVADL 794
PP ++ V + NR +W R Q S I+ D A +AD+
Sbjct: 60 PPNENLVVTSSNRPWW-ERYQPVSYILNTRSGDEAALADM 98
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.8 bits (44), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 675 PPKKH**VCAQNRAYWSRRKQRKSCIVL*SDQDLALVADL 794
PP ++ V + NR +W R Q S I+ D A +AD+
Sbjct: 61 PPNENLVVTSSNRPWW-ERYQPVSYILNTRSGDEAALADM 99
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 77 ASSNVITLMAHSSATISN 24
A SNV T M S AT+ N
Sbjct: 1131 AVSNVTTFMEGSKATVKN 1148
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 77 ASSNVITLMAHSSATISN 24
A SNV T M S AT+ N
Sbjct: 1131 AVSNVTTFMEGSKATVKN 1148
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 382 DLFDVSASASDDTNR 338
+LF + S+S DTNR
Sbjct: 403 ELFQATLSSSSDTNR 417
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,078
Number of Sequences: 336
Number of extensions: 5178
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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