Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00843
(845 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 5e-27
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 115 4e-26
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 96 3e-20
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 8e-20
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 91 1e-18
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 4e-18
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 86 4e-17
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 80 3e-15
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 76 3e-14
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 73 2e-13
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 72 7e-13
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 71 2e-12
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 71 2e-12
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 69 5e-12
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 69 5e-12
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 68 8e-12
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 64 1e-10
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 64 2e-10
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 64 2e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 63 2e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 7e-10
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 59 5e-09
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 57 2e-08
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 57 2e-08
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 55 8e-08
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 53 3e-07
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 53 3e-07
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 51 1e-06
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 48 1e-05
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 48 1e-05
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 48 1e-05
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-05
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 44 1e-04
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 42 5e-04
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 42 6e-04
SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05) 40 0.002
SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034) 38 0.010
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 36 0.031
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 35 0.072
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.22
SB_16774| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 29 3.6
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 29 4.7
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 118 bits (285), Expect = 5e-27
Identities = 52/78 (66%), Positives = 67/78 (85%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T+SIHGDR+Q+EREEAL +F+ G+ +L+AT VAARGLDI +V V+N+DLP IDEYVH
Sbjct: 989 TTSIHGDRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVH 1048
Query: 706 RIGRTGRVGNRGKAVSFY 759
RIGRTGR+GN+GKA +F+
Sbjct: 1049 RIGRTGRIGNKGKATTFF 1066
Score = 111 bits (266), Expect = 9e-25
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
ERQTLMFSATFPE+IQ LAG FLN+YLF+ VG VGG ++D+EQ IEVT EKR+ L Q+
Sbjct: 897 ERQTLMFSATFPEEIQRLAGDFLNDYLFLTVGRVGGTTSDIEQTVIEVTDNEKRDRLTQI 956
Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
+ + R LVFVE+KR+ADF+A L
Sbjct: 957 LGDAGTDRTLVFVESKRSADFLAIFL 982
Score = 90.6 bits (215), Expect = 1e-18
Identities = 38/74 (51%), Positives = 56/74 (75%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
G++L+ V YGG +V HQ + GC++LV TPGRL DF+E+ +VS ++F++LDEADR
Sbjct: 814 GTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADR 873
Query: 183 MLDMGFMPSIEKMM 224
MLDMGF P+I +++
Sbjct: 874 MLDMGFEPAIRRIV 887
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 115 bits (277), Expect = 4e-26
Identities = 56/86 (65%), Positives = 67/86 (77%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
+A+ +SIHGDR QREREEAL+ F+ G ILVATAVAARGLDI NV V+N+DLP
Sbjct: 1120 LAKDGYYCTSIHGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPT 1179
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSFYD 762
I+EYVHRIGRTGRVG+ G A SF++
Sbjct: 1180 DIEEYVHRIGRTGRVGHTGLATSFFN 1205
Score = 88.2 bits (209), Expect = 7e-18
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S+ + V YGG + Q + R CH+LVATPGRL D ++R RV S+RF+VLDEADRM
Sbjct: 952 SLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLDEADRM 1011
Query: 186 LDMGFMPSIEKMMLHPTMVET 248
LDMGF P I +++ +M +T
Sbjct: 1012 LDMGFEPQIRRIVDQDSMPKT 1032
Score = 83.0 bits (196), Expect = 3e-16
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +2
Query: 254 RQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLI 433
RQTLMFSATFP++IQ LA FL NY+F+AVG VG S ++ Q + V +++KR+ L L+
Sbjct: 1035 RQTLMFSATFPKEIQMLARDFLENYIFLAVGKVGSTSENITQKVVWVDEFDKRSFLLDLL 1094
Query: 434 EENDGKRI-LVFVETKRNADFIAAMLRNSNCSHLQFTAIACNVSARKRYRILR 589
+ +++ LVFVETK+ AD + L T+I + S R+R LR
Sbjct: 1095 NASGPQQLTLVFVETKKGADALEMFLAKDG---YYCTSIHGDRSQREREEALR 1144
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 96.3 bits (229), Expect = 3e-20
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +1
Query: 505 VAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPK 684
V +++ +++HG R Q +RE AL + K G ILVAT VA RG+DIK+V V+NYD+ K
Sbjct: 304 VNQKKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAK 363
Query: 685 SIDEYVHRIGRTGRVGNRGKAVSF 756
+I++Y HRIGRTGR G G AVSF
Sbjct: 364 TIEDYTHRIGRTGRAGKTGIAVSF 387
Score = 37.9 bits (84), Expect = 0.010
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +3
Query: 60 DNIA-RGCHILVATPGR-LHDFVERNRVSFG---SVRFV-VLDEADRMLDMGFMPSIEKM 221
DN A +G + L+ P R L +E + FG +R V V+ ADRM+DMGF P ++K+
Sbjct: 172 DNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADRMIDMGFEPEVQKI 231
Query: 222 MLH 230
+ H
Sbjct: 232 LEH 234
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 239 GGDHERQTLMFSATFPEDIQHLAGRFLNNYL 331
G D RQT+MF+AT P ++ LA +L L
Sbjct: 258 GKDKYRQTVMFTATMPPQVERLAKNYLRKKL 288
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 94.7 bits (225), Expect = 8e-20
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+KV V YGG +V +Q + RGCH LV TPGRL DFV R ++ GS++ ++LDEADRMLD
Sbjct: 581 IKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQDFVSREKIYLGSIQHLILDEADRMLD 640
Query: 192 MGFMPSIEKMMLHPTM 239
+GF P I K++ M
Sbjct: 641 LGFGPDIHKLIEESNM 656
Score = 75.4 bits (177), Expect = 6e-14
Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +2
Query: 230 SNHGGDHERQTLMFSATFPEDIQHLAGRFLN-NYLFVAVGIVGGASTDVEQIFIEVTKYE 406
SN RQTLMFSATFP++IQHLAG FL +YLF+AVG VGG + D+ Q I V E
Sbjct: 654 SNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYLFLAVGRVGGTNLDITQHVITVNGSE 713
Query: 407 KRNSLKQLI 433
KR+ L +++
Sbjct: 714 KRDKLHEIL 722
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/105 (41%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C K + + E +S+HGD Q+ERE +++F++G+ +L++T V ARGLD+
Sbjct: 243 CNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDV 302
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY--DLIRI 774
+ V +V+NYDLP + + Y+HRIGR+GR G +G A++F D IRI
Sbjct: 303 QQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRI 347
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GGT + + G HI+ TPGR+ D + R + S++ +VLDEAD ML+ GF I
Sbjct: 101 GGTNIGEDIRKLDYGQHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQI 160
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 90.6 bits (215), Expect = 1e-18
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +1
Query: 526 TSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVH 705
T +HGD Q++RE L++F+ GK LVAT VAARGLDI +D+VV + PK +D Y+H
Sbjct: 331 TQVLHGDIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIH 390
Query: 706 RIGRTGRVGNRGKAVSFY 759
R GRTGR G G + FY
Sbjct: 391 RSGRTGRAGREGICIVFY 408
Score = 66.9 bits (156), Expect = 2e-11
Identities = 32/73 (43%), Positives = 45/73 (61%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRM 185
S L+V YGG Q + I G +LV TPGR+ DF+ + + ++ VVLDE DRM
Sbjct: 172 SNLEVYCIYGGMPYEPQENAINSGLDVLVGTPGRILDFMRQGTLDLSKLKHVVLDEVDRM 231
Query: 186 LDMGFMPSIEKMM 224
LDMGF S+E+++
Sbjct: 232 LDMGFAESVEEVL 244
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 89.0 bits (211), Expect = 4e-18
Identities = 38/68 (55%), Positives = 54/68 (79%)
Frame = +1
Query: 553 QREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVG 732
Q +RE+AL +FK+G IL+AT VA+RGLDIK++ V+NYD P+ I++YVHR+GRTGR G
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAG 137
Query: 733 NRGKAVSF 756
G +++F
Sbjct: 138 RSGTSLTF 145
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVG 346
+RQT+M SAT+P +Q +A +++ + + V VG
Sbjct: 17 DRQTVMTSATWPPGVQRMADQYMTDPVRVFVG 48
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 85.8 bits (203), Expect = 4e-17
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +1
Query: 511 EQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI 690
++Q S +H ++ Q R + ++ F+ GK ILVAT VA+RGLD V V+NYDLP +I
Sbjct: 354 QEQFHASGLHSEKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTI 413
Query: 691 DEYVHRIGRTGRVGNRGKAVSFYDL 765
+ Y+HR GRTGR+G+ G A SF L
Sbjct: 414 ECYIHRCGRTGRIGHHGIATSFLTL 438
Score = 51.6 bits (118), Expect = 8e-07
Identities = 26/91 (28%), Positives = 48/91 (52%)
Frame = +2
Query: 239 GGDHERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNS 418
G RQTL++SAT PE ++ LA + N + + VG G + V+Q + + Y+K
Sbjct: 263 GTSRARQTLLWSATLPESLERLARSAVLNPITIQVGPGGLIAPSVQQNVVFLYHYQKPQK 322
Query: 419 LKQLIEENDGKRILVFVETKRNADFIAAMLR 511
L + + ++VF + +N D++ +L+
Sbjct: 323 LLETLRTTPYPPVIVFTSSIQNVDYVTELLK 353
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDM 194
K GG V Q + G ++VATPGRL D + + ++V+DE DRML M
Sbjct: 197 KAVAVCGGVPVSTQTIALREGADVVVATPGRLLDLYK--------ITYLVMDEPDRMLGM 248
Query: 195 GFMPSIEKMM 224
G + K++
Sbjct: 249 GMEEQLRKIV 258
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 79.8 bits (188), Expect = 3e-15
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
C+N C++ S + L +H Q ER AL FKSG ILVAT VA+RGLDI
Sbjct: 257 CKN---CQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRGLDI 313
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF---YDLIRI 774
V++VVN ++P +Y+HR+GRT R G G A+S YD+ R+
Sbjct: 314 PQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRV 359
Score = 54.8 bits (126), Expect = 8e-08
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVE-RNRVSFGSVRFVVLDEADRML 188
LK AV GG + Q ++A H+++ATPGRL D ++ + ++ ++F+VLDEADR+L
Sbjct: 104 LKEAVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLL 163
Query: 189 DMGF 200
D F
Sbjct: 164 DPSF 167
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
+RQTL+FSAT + + L + V +++Q ++ + + L L
Sbjct: 181 KRQTLLFSATLTDTMGELQKMSGSQPFSYEVQSDIATVAELDQRYLLTPAHVRDCYLVHL 240
Query: 431 IEEN-DGKRILVFVETKRNADFIAAM 505
+ EN D + ++VF T +N + +M
Sbjct: 241 LRENDDNQSVIVFTHTCKNCQVLVSM 266
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 76.2 bits (179), Expect = 3e-14
Identities = 37/91 (40%), Positives = 53/91 (58%)
Frame = +1
Query: 484 CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIV 663
C S + +Q IH Q ER Q FK+ + +LVAT + RG+DI+ V+IV
Sbjct: 348 CTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIV 407
Query: 664 VNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
NYD+P+ D Y+HR+ R GR G +G A++F
Sbjct: 408 FNYDMPEDSDTYLHRVARAGRFGTKGLAITF 438
Score = 44.8 bits (101), Expect = 9e-05
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGC-HILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
S +K+AV +GG ++ + C HI+V TPGR+ ++ + +LDE D+
Sbjct: 143 SNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDK 202
Query: 183 MLD 191
ML+
Sbjct: 203 MLE 205
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 73.3 bits (172), Expect = 2e-13
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Frame = +1
Query: 541 GDRMQREREEALQNFKSGKHC-ILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGR 717
G + Q +R EA++ KS HC IL++T + ARG+D +NV++VVN D+P + + Y+HRIGR
Sbjct: 246 GSQTQAKRLEAMEKLKSF-HCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGR 304
Query: 718 TGRVGNRGKAVSF 756
GR G G AV++
Sbjct: 305 AGRFGTEGMAVTY 317
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L V GG ++ + + CHI V TPGR+ +E+ + SVR +LDEAD++LD
Sbjct: 111 LACKVFIGGISLE-EDKKALKSCHIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLD 169
Query: 192 MGFMPSI 212
F I
Sbjct: 170 ESFQQQI 176
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 72.9 bits (171), Expect = 3e-13
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +1
Query: 517 QLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDE 696
QL +H QR+R + L FK+ +L+AT VAARGLDI N++ V++Y +PK +
Sbjct: 480 QLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEV 539
Query: 697 YVHRIGRTGRVGNRGKAV 750
YVHR GRT R + G +V
Sbjct: 540 YVHRSGRTARASHEGLSV 557
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVER 128
+KVA GG A Q + + I+VATPGRL + + +
Sbjct: 247 VKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWELISQ 285
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 71.7 bits (168), Expect = 7e-13
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI------DE 696
+ G+ +R L+ F+ GK +L+ T V+ARG+D++ V +V+NYD+P + +
Sbjct: 374 LSGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFET 433
Query: 697 YVHRIGRTGRVGNRGKAVSFYD 762
Y+HRIGRTGR G G AV+F D
Sbjct: 434 YLHRIGRTGRFGKSGIAVNFID 455
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQLI 433
Q L+FSAT+ ED+ A + N + + + + +++Q ++ E K +L +
Sbjct: 280 QVLLFSATYDEDVMKFAETVVPNPIIIRLRREEESLDNIKQYYVVCKNSEDKFEALCNMY 339
Query: 434 EENDGKRILVFVETKRNADFIA 499
+ +VF T+RNA ++A
Sbjct: 340 GVLSIGQCVVFCHTRRNAAWLA 361
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 54 QGDNIARG--C--HILVATPGRLHDFVERNR-VSFGSVRFVVLDEADRML 188
+G+ RG C HI++ TPG L D++ +++ V VLDEAD M+
Sbjct: 210 RGNQFPRGQKCTDHIIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMI 259
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 71.3 bits (167), Expect = 9e-13
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = +1
Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
++ + E+ SS+HGD Q+ER+ ++ F+SG +L+ T + ARG+D+ V +V+NYD
Sbjct: 347 AAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYD 406
Query: 676 LPKSIDEYVHR 708
LP + + Y+HR
Sbjct: 407 LPSNRENYIHR 417
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+K GGT VR + G H++V TPGR+ D + R ++ ++ VLDEAD ML
Sbjct: 188 VKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEMLS 247
Query: 192 MGFMPSIEKMMLH-PTMVE 245
GF I + PT V+
Sbjct: 248 RGFKDQIYDVFTRLPTSVQ 266
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 QTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQLI 433
Q ++ SAT P D+ + +F+ + + + V ++Q F+ V K + K ++L L
Sbjct: 266 QVVLLSATMPTDVLEVTNKFMRDVVRILVKREEVTLEGIKQFFVLVEKEDWKLDTLCDLY 325
Query: 434 EENDGKRILVFVETKRNADFIAAML 508
E + ++F T+R D++AA +
Sbjct: 326 ETLTITQAVIFANTRRKVDWLAAKM 350
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 70.5 bits (165), Expect = 2e-12
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
IH DR Q +R+ +++F++GK +L+AT + RG+D K V++V+NYD P S Y+HRIG
Sbjct: 413 IHSDRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIG 472
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 266 MFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYE-KRNSLKQLIEEN 442
+FSAT I+ AG L+N++ V VGI A+ V+Q + V + K +++ ++++
Sbjct: 322 LFSATLSNGIEEWAGLHLDNHVRVTVGIRNSATATVDQELLFVGQESGKLLAVRDIVQKG 381
Query: 443 DGKRILVFVETKRNA 487
+L+FV++K A
Sbjct: 382 FTPPVLIFVQSKDRA 396
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 84 ILVATPGRLHDFV--ERNRVSFGSVRFVVLDEADRMLDMG 197
ILV TP RL + E + +V +++LDEAD++ + G
Sbjct: 259 ILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEG 298
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 70.5 bits (165), Expect = 2e-12
Identities = 34/75 (45%), Positives = 48/75 (64%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
++HG +M+ R + +F+ + ILV T V ARG+DI V+ V+ YD P S + +VHR
Sbjct: 120 ALHG-KMKSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRC 178
Query: 712 GRTGRVGNRGKAVSF 756
GRT R+GN G AV F
Sbjct: 179 GRTARIGNEGNAVVF 193
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 68.9 bits (161), Expect = 5e-12
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCI-LVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
IH Q R +F+ G HC LV + + RG+DI++V++V+N+D PK+ + Y+HRI
Sbjct: 321 IHARMSQSHRNRVFHDFRQG-HCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRI 379
Query: 712 GRTGRVGNRGKAVS 753
GR+GR G+ G A++
Sbjct: 380 GRSGRFGHLGVAIN 393
Score = 48.0 bits (109), Expect = 1e-05
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +3
Query: 81 HILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMMLH 230
H++VATPGR+ D +++ + +V+DEAD++L M F +E+++ H
Sbjct: 174 HVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKH 223
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 68.9 bits (161), Expect = 5e-12
Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCI-LVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
IH Q R +F+ G HC LV + + RG+DI++V++V+N+D PK+ + Y+HRI
Sbjct: 321 IHARMSQSHRNRVFHDFRQG-HCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRI 379
Query: 712 GRTGRVGNRGKAVS 753
GR+GR G+ G A++
Sbjct: 380 GRSGRFGHLGVAIN 393
Score = 48.0 bits (109), Expect = 1e-05
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +3
Query: 81 HILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMMLH 230
H++VATPGR+ D +++ + +V+DEAD++L M F +E+++ H
Sbjct: 174 HVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKH 223
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/60 (48%), Positives = 43/60 (71%)
Frame = +1
Query: 577 QNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
Q FK+ + +LVAT + RG+DI+ V+IV NYD+P+ D Y+HR+ R GR G +G A++F
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 65
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 66.9 bits (156), Expect = 2e-11
Identities = 37/86 (43%), Positives = 47/86 (54%)
Frame = +1
Query: 487 RLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVV 666
+ HS + L IHG + Q++R F + K IL+ T VAARGLDI VD +V
Sbjct: 832 KYHSELLNYIDLPVLEIHGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIV 891
Query: 667 NYDLPKSIDEYVHRIGRTGRVGNRGK 744
YD EY+HR+GRT R G GK
Sbjct: 892 QYDPADDPKEYIHRVGRTAR-GTEGK 916
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/68 (29%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +3
Query: 24 VAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR-VSFGSVRFVVLDEADRMLDMGF 200
+ GG + + + + +G ++L+ATPGRL D ++ + + +++ +V+DEADR+L++GF
Sbjct: 677 IIMGGVNRKAEAERLQKGVNLLIATPGRLLDHLQNTQGFLYKNLQCLVIDEADRILEIGF 736
Query: 201 MPSIEKMM 224
+ +++
Sbjct: 737 EEEMRQII 744
Score = 33.5 bits (73), Expect = 0.22
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFL-NNYLFVAVGIVGGAST--DVEQIFIEVTKYEKRNSL 421
+RQT++FSAT ++++ LA L + L+V V ST +EQ +I V ++ L
Sbjct: 750 KRQTVLFSATQTKNVEDLAKLSLKRSPLYVGVDDHKETSTVEGLEQGYIVVPSEKRFLVL 809
Query: 422 KQLIEENDGKRILVFVETKRNADFIAAML 508
+++N K+++VF + + + + +L
Sbjct: 810 FTFLKKNRSKKVMVFFSSCNSVKYHSELL 838
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/72 (41%), Positives = 45/72 (62%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEY 699
L + G+ R R E + F++ ILV T +A+RGLD +V V+N+D P S+ +Y
Sbjct: 721 LRATKARGNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDY 780
Query: 700 VHRIGRTGRVGN 735
+HR+GRTGRV +
Sbjct: 781 IHRVGRTGRVSH 792
Score = 45.6 bits (103), Expect = 5e-05
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +3
Query: 33 GGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSI 212
GG + D++ +LVATPG L + +++R+ F + +V+DEAD M D F S+
Sbjct: 491 GGRKQKWMRDDLESPVDLLVATPGTLLKYRQKDRLFFSDLTHLVIDEADTMFDASF-KSL 549
Query: 213 EKMMLHPTMVETTKGKL*CFRQHSLK 290
+LH T+ + G C+ ++
Sbjct: 550 TMEILH-TINSSEYGSKECYISRQIR 574
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHGD+ Q ER A++ F G +LVAT VA++GLD ++ V+N+D+P+ I+ YV
Sbjct: 116 AIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVLLC 175
Query: 712 GR 717
G+
Sbjct: 176 GQ 177
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTK 400
+RQTL+FSAT P+ IQ+ A L + V VG G AS DV Q+ I K
Sbjct: 47 QRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASLDVIQVLIFAEK 96
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 153 RFVVLDEADRMLDMGF 200
R++VLDEADRM+DMGF
Sbjct: 18 RYLVLDEADRMIDMGF 33
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
+IHGD+ Q ER A++ F G +LVAT VA++GLD ++ V+N+D+P+ I+ YV
Sbjct: 116 AIHGDKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVLLC 175
Query: 712 GR 717
G+
Sbjct: 176 GQ 177
Score = 43.2 bits (97), Expect = 3e-04
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTK 400
+RQTL+FSAT P+ IQ+ A L + V VG G AS DV Q+ I K
Sbjct: 47 QRQTLLFSATMPKKIQNFAKSALVKPVTVNVGRAGAASLDVIQVLIFAEK 96
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 153 RFVVLDEADRMLDMGF 200
R++VLDEADRM+DMGF
Sbjct: 18 RYLVLDEADRMIDMGF 33
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/71 (43%), Positives = 41/71 (57%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
L+ YGG Q + RG I +ATPGRL D +E + + ++VLDEADRMLD
Sbjct: 161 LRSTCIYGGAPKGPQIRELERGVEICIATPGRLIDMLESRKTNLRRCTYLVLDEADRMLD 220
Query: 192 MGFMPSIEKMM 224
MGF P I ++
Sbjct: 221 MGFEPQIRTII 231
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVG-GASTDVEQIFIEVTKYEKRNSLKQ 427
+RQTLM+SAT+P+++Q LA FL++Y+ + VG +G A+ + QI +EK +++
Sbjct: 237 DRQTLMWSATWPKEVQGLAHDFLSDYVHITVGSLGLTANHKILQIVDVCEDHEKEHNVGS 296
Query: 428 LIEE---NDGKRILVFVETKRNADFIAAMLRNSNC 523
I + L+F ETKR AD + LR+ C
Sbjct: 297 FIGGIVILSSLQTLIFTETKRRADELTRKLRSDGC 331
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +1
Query: 604 ILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
+ V AV DI ++ V+N+D P ++YVHRIGRT R G + +F+
Sbjct: 339 VSVDMAVVIMVADISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFF 390
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 7e-10
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR---VSFGSVRFVVLDEADR 182
L+ YGGT + Q + RG I+V TPGR+ D + N + ++VLDEADR
Sbjct: 173 LRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADR 232
Query: 183 MLDMGFMPSIEKM 221
M DMGF P I K+
Sbjct: 233 MFDMGFEPQITKI 245
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 379
+RQT+MFSATFP ++ LA + L+ + + VG +DVEQ
Sbjct: 260 DRQTVMFSATFPRQMEALARKILDKPIEIQVGGRSVVCSDVEQ 302
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +1
Query: 574 LQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
L++F++G+ +LV T RGLD K +D V ++PK+++EY+H GR GR G G A +
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTATT 530
Query: 754 FYDL 765
D+
Sbjct: 531 VVDM 534
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRML 188
I++ TP RL + V+ + F + +V+DE D+ L
Sbjct: 280 IVIGTPKRLWEIVQEHEHLFQRTKRIVIDEVDKTL 314
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/41 (51%), Positives = 35/41 (85%)
Frame = +1
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
RG+DI++V++V+N+D PK+ + Y+HRIGR+GR G+ G A++
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAIN 45
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 56.8 bits (131), Expect = 2e-08
Identities = 21/41 (51%), Positives = 35/41 (85%)
Frame = +1
Query: 631 RGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVS 753
RG+DI++V++V+N+D PK+ + Y+HRIGR+GR G+ G A++
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAIN 45
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 56.0 bits (129), Expect = 4e-08
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+ V +GG Q + G I+VATPGRL D V+ + V ++V DEADRM D
Sbjct: 619 IHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLIDHVKAKATNLHRVTYLVFDEADRMFD 678
Query: 192 MGF 200
MGF
Sbjct: 679 MGF 681
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFKSGKHCILVATAVA 627
+HGD Q ER + L FK + ILVAT VA
Sbjct: 759 LHGDMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 56.0 bits (129), Expect = 4e-08
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +1
Query: 529 SSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
S ++ Q R + F+ K ++V T VAARG+DI +D V+N+ P +VHR
Sbjct: 503 SYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHR 562
Query: 709 IGRTGRVGNRGKAVS 753
+GR R G G A S
Sbjct: 563 VGRVARAGRSGTAYS 577
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 63 NIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
++ G +VATPGR V + SV +VV DEADR
Sbjct: 383 SVILGGDSVVATPGRFLHVVMEMELKLSSVEYVVFDEADR 422
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 54.8 bits (126), Expect = 8e-08
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 3 GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNR-VSFGSVRFVVLDEAD 179
G +K AV GG + Q +A+ HI++ATPGRL D +E + S +++++V+DEAD
Sbjct: 58 GIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLIDHLENTKGFSLRTLKYLVMDEAD 117
Query: 180 RMLDMGF 200
R+L+M F
Sbjct: 118 RILNMDF 124
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 637 LDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
L + D ++N D K ++Y+HR+GRT R G G++V+F
Sbjct: 111 LVMDEADRILNMDFEK--EDYIHRVGRTARAGRSGRSVTF 148
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRI 711
S H +R + + F SG+ + AT GLD +V +++Y++PKS + YV I
Sbjct: 817 SYHAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEI 876
Query: 712 GRTGRVGNRGKAVSFYD 762
GR GR G F D
Sbjct: 877 GRAGRDGKPSHCHVFLD 893
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +2
Query: 248 HERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQ 427
+ RQT++FSAT P I+ +A R LN +F++ G + V+Q+ + V + K+ L
Sbjct: 309 NRRQTMLFSATIPPSIEAMASRLLNAPVFISAGSPSLPTKAVKQLILWVEEKSKKKQLFS 368
Query: 428 LIEEND--GKRILVFVETKRNADFIA 499
+++++ +VFVE+K AD +A
Sbjct: 369 ILKDSRHFNPPAVVFVESKLGADMLA 394
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +1
Query: 652 VDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSF 756
V V+N+D+P + +EYVH+IGR GR+G G ++SF
Sbjct: 397 VSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISF 431
Score = 43.2 bits (97), Expect = 3e-04
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 75 GCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMM 224
G ++VATPGR+ + + R V V V+DE D ML +GF +++++
Sbjct: 255 GVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQIL 304
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/98 (27%), Positives = 46/98 (46%)
Frame = +1
Query: 466 CRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDI 645
CR + C+ +S ++ + L H +R++ Q + GK ++ AT G+D
Sbjct: 255 CRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMGVDK 314
Query: 646 KNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
+V V ++ LP+S++ Y GR GR G FY
Sbjct: 315 GDVRFVAHWSLPQSMEGYYQESGRAGRDGQPSYCRLFY 352
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 51.2 bits (117), Expect = 1e-06
Identities = 32/88 (36%), Positives = 47/88 (53%)
Frame = +1
Query: 463 ICRNKT*CRLHSSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLD 642
+CR+K R+ S + Q T Q+E+ E + F+ G + LV+T V GLD
Sbjct: 539 LCRHKPLVRV-MSFIG--QASTGKSSKGLSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLD 595
Query: 643 IKNVDIVVNYDLPKSIDEYVHRIGRTGR 726
I +VD++V +D S V R+GRTGR
Sbjct: 596 IGDVDLIVCFDAHASPIRLVQRMGRTGR 623
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = +1
Query: 541 GDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRT 720
G ++ E+E + + A+RGLDI NV V+ D + +HR+GRT
Sbjct: 80 GTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLDIPNVTHVIQLDFATDAAQMLHRVGRT 139
Query: 721 GRVGNRGKAVSF 756
R G+ GK V+F
Sbjct: 140 ARAGSHGKVVNF 151
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 48.0 bits (109), Expect = 1e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 538 HGDRM-QREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIG 714
HG + + E+ E ++ F+S L+AT G +V++V + P+++ +V G
Sbjct: 1073 HGKGLTENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFG 1132
Query: 715 RTGRVGNRGKAVSFYDLIR 771
R GR GN KA+ +Y+ R
Sbjct: 1133 RGGRAGNNAKAIIYYNEFR 1151
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/45 (55%), Positives = 31/45 (68%)
Frame = +1
Query: 520 LLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNV 654
L +HG+ Q +R EALQ FK+G+ ILVAT +AARGLDI V
Sbjct: 33 LNADELHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGV 77
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +1
Query: 541 GDRMQREREEALQNFKSGKHC-ILVATAVAARGLDIKNVDIVVNYDL 678
G QRE+EE + F++G C I++AT VA GLDI + V+ YD+
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDM 643
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 499 SHVAEQQLLTSSIHGDRMQREREEALQNF--KSGKHCILVATAVAARGLDIKNVDIVVNY 672
S E + + H ++E L F + K ++VAT G+DI +VD ++++
Sbjct: 277 SENVESKETYAMFHSKTPDSIQKEVLGEFIKSNSKIRVVVATCALGMGVDIPDVDHIIHF 336
Query: 673 DLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
+P ++ YV IGR GR G A +Y
Sbjct: 337 GIPSEVEHYVQEIGRGGRDGRLCYATLYY 365
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERN-RVSFGSVRFVVLDEADRML 188
L + GG ++++ I + +I+V TPGRL ++ S++ +VLDEADR+L
Sbjct: 151 LSAGLIIGGKDLKNEQKRIMK-TNIVVCTPGRLLQHMDETPNFDCTSLQILVLDEADRIL 209
Query: 189 DMGFMPSIEKMM 224
DMGF P++ ++
Sbjct: 210 DMGFAPTLNAII 221
Score = 29.1 bits (62), Expect = 4.7
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 532 SIHGDRMQREREEALQNFKSGKHCILVATAVAARGL 639
+++G + Q +R F C+L AT +AARGL
Sbjct: 304 ALYGKQKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 44.8 bits (101), Expect = 9e-05
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 6 SVLKVAVAYGGTAVRHQGDNIARGC-HILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
S +K+AV +GG ++ + C HI+V TPGR+ ++ + +LDE D+
Sbjct: 143 SNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDK 202
Query: 183 MLD 191
ML+
Sbjct: 203 MLE 205
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +3
Query: 84 ILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMMLHPTMVETTKGK 260
I+ TPG+L+DF+ +++S V+F +LDEAD +L G I M ++ + + T GK
Sbjct: 138 IVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLI--MKIYNKIPKITAGK 194
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 44.0 bits (99), Expect = 2e-04
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +1
Query: 553 QREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
Q+E+E ++ FK G IL+AT+VA GLDIK+ V+ YD
Sbjct: 984 QQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYD 1024
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +1
Query: 523 LTSSIHGDRMQREREEALQNF--KSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDE 696
L +H ++ L +F + G +L+AT G+D K V V++Y KS++
Sbjct: 320 LVEMLHSCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEA 379
Query: 697 YVHRIGRTGRVGNRGKA 747
Y+ GR GR G+ A
Sbjct: 380 YIQETGRAGRDGSNSVA 396
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = +1
Query: 559 EREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGR 717
++E+ L+ F+ + +LVAT+V GLD+ + VV +D P++ YV GR
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQSKGR 184
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 42.3 bits (95), Expect = 5e-04
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 634 GLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
G+DI +VD +++Y +P ++ YV IGR GR G A +Y
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGRDGRLCHATLYY 43
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 604 ILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
++VAT G+D NV V+++ KS++ Y GR GR R + FY
Sbjct: 355 VVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEKRASCIVFY 406
>SB_9751| Best HMM Match : Helicase_C (HMM E-Value=3.4e-05)
Length = 798
Score = 40.3 bits (90), Expect = 0.002
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +1
Query: 634 GLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRGKAVSFY 759
G+D +V V++Y +PKS++ Y GR GR G + + + +Y
Sbjct: 47 GIDKGDVRYVIHYSMPKSLEGYYQECGRAGRDGKKAECILYY 88
>SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034)
Length = 144
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 592 GKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGN 735
G H ++ AT G+D KNV VV + +P+ ++ Y GR GR G+
Sbjct: 77 GAH-VMCATKAFGLGIDQKNVRFVVPHIMPECVEHYYEEAGRAGRDGD 123
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 36.3 bits (80), Expect = 0.031
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFK--SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+H + ++ L++FK G +LVAT G+D K V +++ K+ + ++
Sbjct: 206 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFIQE 265
Query: 709 IGRTGR 726
GR GR
Sbjct: 266 TGRAGR 271
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 36.3 bits (80), Expect = 0.031
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQ 379
+RQ L+FSATF +DI+ LA + L+N L + V AS V Q
Sbjct: 34 KRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVLQ 76
Score = 35.9 bits (79), Expect = 0.041
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 150 VRFVVLDEADRMLDMGFMPSIEKMM 224
V +VLDEADRMLDMGF+ I +++
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVL 28
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 36.3 bits (80), Expect = 0.031
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 12 LKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVER 128
+K GGT VR + G H++V TPGR+ D + R
Sbjct: 3 VKCHACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINR 41
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 35.1 bits (77), Expect = 0.072
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +1
Query: 535 IHGDRMQREREEALQNFK--SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHR 708
+H + ++ L++FK G +LVAT G+D K V +++ K+ + ++
Sbjct: 237 LHSCTPKENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQE 296
Query: 709 IGRTGRVGNRGKAVSFY 759
G GR G + Y
Sbjct: 297 TGHAGRDGKSSFSYLLY 313
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 33.5 bits (73), Expect = 0.22
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +3
Query: 15 KVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLD 191
+V + +GG A + + GC +LVATP ++R S + VV D+AD + +
Sbjct: 294 RVQMIFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDADMLAE 352
>SB_16774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 51 HQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADRMLDMGFMPSIEKMMLH 230
H N AR + ATPG DF+ +N GS V+++ + G E +
Sbjct: 306 HSNKNKARHIFDMYATPGLALDFLNKN-AGNGSTHKVIIEGVWKKFFKGLFTVSESLYAD 364
Query: 231 PTMVETTKGKL 263
++ KG+L
Sbjct: 365 SHVIRELKGEL 375
>SB_46817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 556 REREEALQNFK---SGKHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGR 726
RER+ + +F S K +++T G+++ DIV+ YD + + + R R
Sbjct: 322 RERQAYINSFNMPGSTKFIFMLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHR 381
Query: 727 VGNRGKAVSF 756
+G + + F
Sbjct: 382 IGQKKQVKVF 391
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 455 ILVFVETKRNADFIAAMLRNSNCSH 529
I+VF K A+F+ LRN +C+H
Sbjct: 857 IIVFRPNKNTAEFVRTELRNKSCNH 881
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 147 SVRFVVLDEADRMLDMGFMPSI 212
S++ +VLDEAD ML+ GF I
Sbjct: 35 SIKMLVLDEADEMLNKGFKEQI 56
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 679 PKSIDEYVHRIGRTGRVGNRGKAVSFY 759
PK I+ Y IGR GR G FY
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFY 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,198,065
Number of Sequences: 59808
Number of extensions: 602293
Number of successful extensions: 1401
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2395401800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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