Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00843
         (845 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   139   8e-35
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   5.1  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  139 bits (337), Expect = 8e-35
 Identities = 65/89 (73%), Positives = 79/89 (88%)
 Frame = +1

Query: 496 SSHVAEQQLLTSSIHGDRMQREREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYD 675
           +S ++E Q  T+SIHGDR+QRERE AL +FKSG+  +L+AT+VAARGLDIKNV+ VVNYD
Sbjct: 440 ASLMSETQFPTTSIHGDRLQREREMALYDFKSGRMDVLIATSVAARGLDIKNVNHVVNYD 499

Query: 676 LPKSIDEYVHRIGRTGRVGNRGKAVSFYD 762
           LPKSID+YVHRIGRTGRVGN+G+A SFYD
Sbjct: 500 LPKSIDDYVHRIGRTGRVGNKGRATSFYD 528



 Score =  117 bits (281), Expect = 5e-28
 Identities = 55/81 (67%), Positives = 66/81 (81%)
 Frame = +3

Query: 3   GSVLKVAVAYGGTAVRHQGDNIARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDEADR 182
           G+ LKV V+YGGTAV+HQ   +  GCH+LVATPGRL DF++R  V+F +V FVVLDEADR
Sbjct: 275 GTKLKVCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADR 334

Query: 183 MLDMGFMPSIEKMMLHPTMVE 245
           MLDMGF+PSIEK+M H TM E
Sbjct: 335 MLDMGFLPSIEKVMGHATMPE 355



 Score =  107 bits (256), Expect = 6e-25
 Identities = 50/86 (58%), Positives = 67/86 (77%)
 Frame = +2

Query: 251 ERQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQL 430
           +RQTLMFSATFP +IQ LAG+FL+NY+ V VGIVGGA  DVEQ    V K++KR  L+++
Sbjct: 358 QRQTLMFSATFPAEIQELAGKFLHNYICVFVGIVGGACADVEQTIHLVEKFKKRKKLEEI 417

Query: 431 IEENDGKRILVFVETKRNADFIAAML 508
           +   + K  LVFVETKRNAD++A+++
Sbjct: 418 LNGGNPKGTLVFVETKRNADYLASLM 443



 Score = 28.7 bits (61), Expect = 0.23
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +2

Query: 797 KILRQADQSVPDFLK 841
           KIL QA QSVPDFLK
Sbjct: 541 KILTQAGQSVPDFLK 555


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = +2

Query: 278 TFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNS 418
           T  E +  L G FLN Y    + +VG     +  +    TK +K +S
Sbjct: 28  TETEVVMELIGNFLNFYYMPLLVVVGSIGNILSVLVFFNTKLKKLSS 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,860
Number of Sequences: 2352
Number of extensions: 19586
Number of successful extensions: 42
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)