Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00842
         (785 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   146   1e-37
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   146   1e-37
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   115   5e-28
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.7  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  146 bits (355), Expect = 1e-37
 Identities = 66/87 (75%), Positives = 80/87 (91%)
 Frame = +1

Query: 508 IIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 687
           +IFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++ 
Sbjct: 24  LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISG 83

Query: 688 NKRALRRLRTACERAKRTLSSSTQAAL 768
           N RALRRLRT CERAKRTLSS+TQA++
Sbjct: 84  NPRALRRLRTQCERAKRTLSSATQASI 110



 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +2

Query: 440 INEPTAAAIAYGLDKKGTGERNVL 511
           INEPTAAAIAYGLDKK   ERNVL
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVL 24


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  146 bits (355), Expect = 1e-37
 Identities = 66/87 (75%), Positives = 80/87 (91%)
 Frame = +1

Query: 508 IIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 687
           +IFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D++ 
Sbjct: 24  LIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISG 83

Query: 688 NKRALRRLRTACERAKRTLSSSTQAAL 768
           N RALRRLRT CERAKRTLSS+TQA++
Sbjct: 84  NPRALRRLRTQCERAKRTLSSATQASI 110



 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +2

Query: 440 INEPTAAAIAYGLDKKGTGERNVL 511
           INEPTAAAIAYGLDKK   ERNVL
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVL 24


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  115 bits (276), Expect = 5e-28
 Identities = 49/87 (56%), Positives = 73/87 (83%)
 Frame = +1

Query: 508 IIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLAT 687
           +++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K+KKD+  
Sbjct: 23  LVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKDIRA 82

Query: 688 NKRALRRLRTACERAKRTLSSSTQAAL 768
           +K+AL++LR   E+AKR LSS  +  L
Sbjct: 83  DKKALQKLRREVEKAKRDLSSVHKTTL 109



 Score = 41.9 bits (94), Expect = 6e-06
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +2

Query: 440 INEPTAAAIAYGLDKKGTGERNVL 511
           INEPTAAAIAYGLDKKG  E+N+L
Sbjct: 1   INEPTAAAIAYGLDKKG-AEQNIL 23


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 395 TKDAGTISGLNVLRIINEPTAA 460
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +1

Query: 283 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 408
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,097
Number of Sequences: 336
Number of extensions: 4393
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)