Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00840
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J pr... 59 1e-08
BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J pr... 59 1e-08
BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J pr... 59 1e-08
BC024209-1|AAH24209.3| 372|Homo sapiens CENPJ protein protein. 59 1e-08
AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J pr... 59 1e-08
AJ303006-1|CAC80028.1| 372|Homo sapiens LAG-3-associated protei... 59 1e-08
AF141337-1|AAG49440.1| 197|Homo sapiens LYST-interacting protei... 59 1e-08
AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associ... 58 3e-08
U03399-1|AAA82109.1| 416|Homo sapiens T-complex protein 10A pro... 56 1e-07
BC094002-1|AAH94002.1| 343|Homo sapiens skin aspartic protease ... 31 6.0
BC094000-1|AAH94000.1| 343|Homo sapiens skin aspartic protease ... 31 6.0
BC031997-1|AAH31997.1| 152|Homo sapiens SASP protein protein. 31 6.0
AK057813-1|BAB71587.1| 259|Homo sapiens protein ( Homo sapiens ... 31 6.0
AK055994-1|BAB71067.1| 343|Homo sapiens protein ( Homo sapiens ... 31 6.0
AC079811-1|AAY24017.1| 343|Homo sapiens unknown protein. 31 6.0
>BC113664-1|AAI13665.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 1299 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 1336
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 1232 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 1288
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 1289 ELHTAQFKRREY 1300
>BC113662-1|AAI13663.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 1299 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 1336
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 1232 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 1288
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 1289 ELHTAQFKRREY 1300
>BC113110-1|AAI13111.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 1299 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 1336
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 1232 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 1288
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 1289 ELHTAQFKRREY 1300
>BC024209-1|AAH24209.3| 372|Homo sapiens CENPJ protein protein.
Length = 372
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 333 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 370
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 266 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 322
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 323 ELHTAQFKRREY 334
>AL354798-4|CAI16635.1| 1338|Homo sapiens centromere protein J
protein.
Length = 1338
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 1299 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 1336
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 1232 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 1288
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 1289 ELHTAQFKRREY 1300
>AJ303006-1|CAC80028.1| 372|Homo sapiens LAG-3-associated protein
protein.
Length = 372
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 333 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 370
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 266 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 322
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 323 ELHTAQFKRREY 334
>AF141337-1|AAG49440.1| 197|Homo sapiens LYST-interacting protein
LIP1 protein.
Length = 197
Score = 59.3 bits (137), Expect = 1e-08
Identities = 24/38 (63%), Positives = 32/38 (84%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G+++MD+
Sbjct: 158 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVLMDT 195
Score = 58.8 bits (136), Expect = 2e-08
Identities = 33/92 (35%), Positives = 45/92 (48%)
Frame = +2
Query: 242 QMDHGIKVSKWEC*THIC*CGQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDG 421
Q H WE H GQ+EK Y DG EI P+ +++ P + EE FPDG
Sbjct: 73 QTTHTTYPEXWEV-LHFS-SGQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDG 127
Query: 422 AALTISASGEQRIIFSNGQIEVHAADHKRASF 517
+ + G + I F+NGQ E+H A KR +
Sbjct: 128 TIVRVQRDGNKLIEFNNGQRELHTAQFKRREY 159
>AF139625-1|AAG21074.1| 1338|Homo sapiens centrosomal P4.1-associated
protein protein.
Length = 1338
Score = 58.4 bits (135), Expect = 3e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +2
Query: 302 GQVEKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQI 481
GQ+EK Y DG EI P+ +++ P + EE FPDG + + G + I F+NGQ
Sbjct: 1232 GQIEKHYPDGRKEITFPDQTVKNLFPDGQ---EESIFPDGTIVRVQRDGNKLIEFNNGQR 1288
Query: 482 EVHAADHKRASF 517
E+H A KR +
Sbjct: 1289 ELHTAQFKRREY 1300
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDS 624
E+PDGTVK VY +G ET+Y SGRIR+KDK G++ MD+
Sbjct: 1299 EYPDGTVKTVYANGHQETKYRSGRIRVKDKEGNVSMDT 1336
>U03399-1|AAA82109.1| 416|Homo sapiens T-complex protein 10A
protein.
Length = 416
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/56 (42%), Positives = 37/56 (66%)
Frame = +1
Query: 511 EFPDGTVKLVYHDGTSETRYASGRIRIKDKHGSLIMDSARN*IPHLVLYSATRLVV 678
E+PDGTVK VY G ET+YASGR++IKD+ G++++D + H + +L +
Sbjct: 354 EYPDGTVKTVYCSGCQETKYASGRVKIKDEAGNVVLDEKQMSPQHAASHGKCQLQI 409
Score = 54.8 bits (126), Expect = 3e-07
Identities = 26/69 (37%), Positives = 41/69 (59%)
Frame = +2
Query: 311 EKRYKDGSSEIRLPNGSIRYFDPKNEHVREEWRFPDGAALTISASGEQRIIFSNGQIEVH 490
EK Y +GS EI P+G++ + + +EE FPDG + + +G++ I+ SNGQ E+H
Sbjct: 291 EKFYPNGSKEIVFPDGTVEHL----KDGQEETLFPDGTIVRVERNGDKTIVLSNGQKEIH 346
Query: 491 AADHKRASF 517
A KR +
Sbjct: 347 TARFKRREY 355
>BC094002-1|AAH94002.1| 343|Homo sapiens skin aspartic protease
protein.
Length = 343
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 396 RTCSFLGSKYRILPFGKRISEEPSLYLFST*PHQQ 292
RTC+ G K+R+LP G + +E L L P +
Sbjct: 301 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSE 335
>BC094000-1|AAH94000.1| 343|Homo sapiens skin aspartic protease
protein.
Length = 343
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 396 RTCSFLGSKYRILPFGKRISEEPSLYLFST*PHQQ 292
RTC+ G K+R+LP G + +E L L P +
Sbjct: 301 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSE 335
>BC031997-1|AAH31997.1| 152|Homo sapiens SASP protein protein.
Length = 152
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 396 RTCSFLGSKYRILPFGKRISEEPSLYLFST*PHQQ 292
RTC+ G K+R+LP G + +E L L P +
Sbjct: 110 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSE 144
>AK057813-1|BAB71587.1| 259|Homo sapiens protein ( Homo sapiens
cDNA FLJ25084 fis, clone CBL08511. ).
Length = 259
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 396 RTCSFLGSKYRILPFGKRISEEPSLYLFST*PHQQ 292
RTC+ G K+R+LP G + +E L L P +
Sbjct: 217 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSE 251
>AK055994-1|BAB71067.1| 343|Homo sapiens protein ( Homo sapiens
cDNA FLJ31432 fis, clone NT2NE2000550. ).
Length = 343
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 396 RTCSFLGSKYRILPFGKRISEEPSLYLFST*PHQQ 292
RTC+ G K+R+LP G + +E L L P +
Sbjct: 301 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSE 335
>AC079811-1|AAY24017.1| 343|Homo sapiens unknown protein.
Length = 343
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 396 RTCSFLGSKYRILPFGKRISEEPSLYLFST*PHQQ 292
RTC+ G K+R+LP G + +E L L P +
Sbjct: 301 RTCTLKGKKFRLLPVGGSLEDEFDLELIEEDPSSE 335
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,266,609
Number of Sequences: 237096
Number of extensions: 2131692
Number of successful extensions: 7301
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7285
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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