Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00839
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023D492 Cluster: hypothetical protein FG10736.1; ...    33   7.3  
UniRef50_Q4YNB3 Cluster: Putative uncharacterized protein; n=4; ...    33   7.3  

>UniRef50_UPI000023D492 Cluster: hypothetical protein FG10736.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG10736.1 - Gibberella zeae PH-1
          Length = 809

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -1

Query: 715 ALQTVSHKQQHVPFKQDRKTIFKGLFRY*R 626
           AL+T S+  +H+  K++ + I+KGLFRY R
Sbjct: 75  ALETTSNTSRHLNHKRNIQNIYKGLFRYIR 104


>UniRef50_Q4YNB3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 758

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 20/81 (24%), Positives = 39/81 (48%)
 Frame = -1

Query: 484 KKENTFYFDNDKVYFCDRSAEVEI*LVNISRINQNQTLIVTQ*LYNLNLVIYINACNGQG 305
           K  N  Y DN+ +YFC      ++ L+  + + +++  +    + +LN  + I+  N   
Sbjct: 133 KYHNKIYIDNNYIYFCINDL-TKLSLITHTNLYKDKHGLSNVIMIDLNNSVEIDEKNKWT 191

Query: 304 HNTK*SNIFKTESEKKTNKNI 242
           +N    N+  +E +KK  K I
Sbjct: 192 YNQDDGNVKDSEKKKKKKKKI 212


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,818,295
Number of Sequences: 1657284
Number of extensions: 10942457
Number of successful extensions: 25635
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25607
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)