Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00837
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    27   0.15 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    24   1.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   9.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 8/90 (8%)
 Frame = -1

Query: 386 KSDRNKKIQLLYLVQF*K-ISLYRVN-YIIIISTFYLIM*WIIL------CLYIFFIMTY 231
           KS    +I +  ++ F K  SLY  N Y+I+++TFY    W  L      C  I     Y
Sbjct: 54  KSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFYKRRTWTRLLKNLESCAKIKKTKRY 113

Query: 230 SYRYFIRNNEEKKKTFFVVYVMLILPKKNI 141
            Y Y+            ++Y + +  +K++
Sbjct: 114 CYYYYAFFGVHLAYGVVIIYSICVQTEKSV 143


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +1

Query: 349 KYKSCIFLLR--SDFNDKHCVLSFNPFVISEVTLVSFSWY 462
           ++ S I +L+  S+ NDK  +  F+PF+++ +  V+   Y
Sbjct: 374 QWNSLIKILKTVSNRNDKGDIFWFSPFLVANLAFVTIVTY 413


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 412 FNPFVISEVTLVS 450
           F PF+IS ++LVS
Sbjct: 232 FEPFLISNISLVS 244


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 551  PNLHGDHNRAVCKFTIK 601
            P LH D+N+ +C +  K
Sbjct: 1309 PGLHWDNNKNICDWPEK 1325


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 263 LCLYIFFIMT 234
           LCLY+F I+T
Sbjct: 291 LCLYLFLIIT 300


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 254 YIFFIMTYSYRYFIRNNEEKK 192
           Y+F      + YF++ N+E K
Sbjct: 140 YVFVTSYLLFDYFVQRNQEYK 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,518
Number of Sequences: 336
Number of extensions: 3328
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)