Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00836
         (724 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    27   0.15 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    26   0.36 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   5.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   7.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   7.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.6  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 290 MTSCGPRWRRPRHVLLPA 237
           +TS GP+W+  R +L PA
Sbjct: 116 LTSAGPKWQNRRKILTPA 133


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 290 MTSCGPRWRRPRHVLLPA 237
           +TS GP+W+  R +L PA
Sbjct: 116 LTSRGPKWQNRRKILTPA 133


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -3

Query: 242 PAPDAPGDQPGQLVAAVTYGTGQGGS-TVALASVPALLSPXAH 117
           P P       G LV+  +Y  G  G   V++AS    L+P  H
Sbjct: 78  PVPHTSSFNMGYLVSPYSYANGAAGPIPVSMASKMG-LAPTGH 119


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -1

Query: 355 GNVLNSVSGGSVTPRVHLPVDP*PHAGHVGVDRGTSFCPHPMPQATSPASL*RLSPM 185
           G+   S + G+V     +P+     A   GV R     P P P+  S   L R +P+
Sbjct: 104 GSSTTSATSGAVMASPPMPITTDNVAAISGVLRSLLDRPLPAPERPSFEGLKRQNPV 160


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 558 PSDIGYNLF 584
           PSD+ YNLF
Sbjct: 180 PSDVSYNLF 188


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 558 PSDIGYNLF 584
           PSD+ YNLF
Sbjct: 136 PSDVSYNLF 144


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 172 GAPPSPWQVSLPSCPPXHTKL 110
           G  P  WQ + P  PP  ++L
Sbjct: 60  GLLPLAWQANSPPSPPAPSEL 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,502
Number of Sequences: 336
Number of extensions: 4012
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)