Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00836
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 66 4e-11
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 58 1e-08
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 55 5e-08
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 54 9e-08
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 54 2e-07
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 53 2e-07
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 52 5e-07
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 52 6e-07
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 51 8e-07
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 51 8e-07
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 50 2e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 50 3e-06
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 46 3e-05
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 45 5e-05
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 45 5e-05
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 45 7e-05
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 45 7e-05
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 44 2e-04
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 42 4e-04
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 39 0.005
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.008
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.011
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.044
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.058
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.077
SB_24599| Best HMM Match : Complex1_24kDa (HMM E-Value=0) 33 0.31
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 33 0.31
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 31 0.72
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 31 0.95
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 31 0.95
SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.8
SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 29 5.0
SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1) 29 5.0
SB_961| Best HMM Match : CUB (HMM E-Value=3.4e-08) 29 5.0
SB_58034| Best HMM Match : VWA (HMM E-Value=0) 29 5.0
SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12) 28 8.8
SB_13076| Best HMM Match : NUC202 (HMM E-Value=3) 28 8.8
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.8
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 6 YAVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG-GQEGRDTCQGDGGAPLAC 182
Y+ +L ++E+D+V CN+ + GT ++D + C G Q GRD+C GD G PL C
Sbjct: 132 YSPVLNELEVDIVSKEVCNA--NDSYNGT---INDRYFCAGFPQGGRDSCGGDSGGPLVC 186
Query: 183 PIGDSRYKLAGLVAWGIGCGQ 245
D +Y L G+V+WG GC +
Sbjct: 187 SNADGQYVLRGVVSWGEGCAR 207
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQ 245
RLH+S VC G G D+CQGD G P+ C + ++ L G+V+WGIGC +
Sbjct: 34 RLHESMVCAGRASGGIDSCQGDSGGPMVCEY-NGKFNLEGVVSWGIGCAR 82
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 55.6 bits (128), Expect = 4e-08
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGC 239
++H+S +C G ++G D+CQGD G PL C + R+ L G+ +WG GC
Sbjct: 195 KIHESMLCAGLEQGGVDSCQGDSGGPLVCEDTNGRWHLEGVTSWGYGC 242
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 55.2 bits (127), Expect = 5e-08
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG-GQEGRDTCQGDGGAPLACPIG 191
IL++ + +V RC ++ G ++HDS +C G Q G DTCQGD G P+ C
Sbjct: 842 ILQQASVPVVSRARC----EKAYPG---KIHDSMLCAGLDQGGIDTCQGDSGGPMVCE-S 893
Query: 192 DSRYKLAGLVAWGIGCGQ 245
R+ + G +WG GC Q
Sbjct: 894 RGRFYIHGATSWGYGCAQ 911
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEGRDT-CQGDGGAPLACPIG 191
IL++ + + C +Q+ G ++ DS VC G + C GD G P C
Sbjct: 199 ILQQAMMPPLSQDACKKKVQQAGFG--IQITDSMVCAGVPGSVVSGCHGDSGGPYVCIQP 256
Query: 192 DSRYKLAGLVAWGIG 236
D RY L G V+WG G
Sbjct: 257 DGRYVLQGDVSWGSG 271
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 54.4 bits (125), Expect = 9e-08
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 6 YAVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG-GQEGRDTCQGDGGAPLAC 182
++ LK++++ +V CNS + + +H+ F+C G Q G+D C GD G PL+C
Sbjct: 129 FSPTLKQLKVPLVNKSVCNSNNSYSGI-----IHEQFMCAGYNQGGQDGCLGDSGGPLSC 183
Query: 183 PIGDSRYKLAGLVAWGIGCGQKD 251
+ L GL++WG C D
Sbjct: 184 QTESGDWVLTGLMSWGEKCALPD 206
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 102 LHDSFVCXGGQEGR-DTCQGDGGAPLAC--PIGDSRYKLAGLVAWGIGCGQKDVP 257
++D +C G + G+ D+C+GD G P C P SR+ L G V+WG+GC +K P
Sbjct: 608 INDKVICAGYEGGKIDSCKGDSGGPFVCKDPRVTSRFILHGAVSWGVGCARKGQP 662
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 9 AVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEGR-DTCQGDGGAPLACP 185
++ L+++++ MVP CNS + +H+ +C G +EG CQ D G PLAC
Sbjct: 181 SLALREVQVHMVPRELCNSANSYGGV-----IHERALCAGPREGGCGPCQFDSGGPLACS 235
Query: 186 IGDSRYKLAGLVAWGIGCG 242
G Y + G+V++G+GCG
Sbjct: 236 EGGLWY-MYGIVSYGVGCG 253
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 52.0 bits (119), Expect = 5e-07
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGC 239
++HDS +C G +G D CQGD G P+ C G R+ + G +WG GC
Sbjct: 64 KIHDSMICAGIDKGGIDACQGDSGGPMVCENG-GRFYIHGATSWGYGC 110
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEG-RDTCQGDGGAPLACPIG 191
+L + + +V + CN L GT +H++ +C G + G +D+C+ D G PLAC G
Sbjct: 179 VLNFVMVPLVSHATCNKPLSYN--GT---IHETALCAGYERGLKDSCEFDSGGPLACQKG 233
Query: 192 DSRYKLAGLVAWGIGCGQ 245
RY GLV+WG C +
Sbjct: 234 -GRYYAVGLVSWGDECAR 250
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Frame = +3
Query: 66 LLQRTRLGTRF--RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIG 236
L+ +++ T + ++HDS +C G G D CQGD G PL C + R+ + G +WG G
Sbjct: 101 LVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEY-NGRWHIEGATSWGYG 159
Query: 237 C 239
C
Sbjct: 160 C 160
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG-GQEGRDTCQGDGGAPLACPIG 191
+L + + +V C Q+ +++ C G G G D CQGD G PL C G
Sbjct: 251 VLHQAAVPLVSRDTC----QKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGGPLVCKEG 306
Query: 192 DSRYKLAGLVAWGIGCGQ 245
D Y L G ++WG+GC +
Sbjct: 307 DVWY-LMGAISWGVGCAR 323
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG-GQEGRDTCQGDGGAPLACPIG 191
++++ + +VP CN + + G+ +H +C G Q G D CQ D G PL+C IG
Sbjct: 191 VIREATVKLVPPEICNQV--ESYNGS---IHVRALCAGFDQGGVDACQFDSGGPLSCSIG 245
Query: 192 DSRYKLAGLVAWGIGCGQ 245
SR+ L G+V+WG C +
Sbjct: 246 -SRFYLTGVVSWGHECAR 262
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 227 GHRVRAEGRAAVYANVARMRSWVDRKMNAW 316
GH + VYAN+ RM SWV R AW
Sbjct: 257 GHECARPKKYGVYANMMRMTSWV-RDTIAW 285
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 66 LLQRTRLGTRF--RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIG 236
L+ +++ T + ++HDS +C G G D CQGD G PL C R+ + G +WG G
Sbjct: 445 LVSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSGGPLVCEY-KGRWHIEGATSWGYG 503
Query: 237 C 239
C
Sbjct: 504 C 504
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +3
Query: 9 AVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEGRDTCQGDGGAPLACPI 188
A +L+ ++ PN C+ + TR F +F G+ G DTC GD G
Sbjct: 245 AKVLRHSAFEIQPNDVCD---RSTR--HNFNATVTFCAGDGKGGNDTCHGDSGGSFVREF 299
Query: 189 ---GDSRYKLAGLVAWGIGCGQKD 251
G R+ AG+V+WG GCGQKD
Sbjct: 300 RREGKYRWVSAGIVSWGEGCGQKD 323
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 49.6 bits (113), Expect = 3e-06
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = +3
Query: 138 GRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQKDVP 257
G DTCQGD G PL C ++++ L G+ +WG GC D P
Sbjct: 395 GIDTCQGDSGGPLVCE-NNNKWTLVGVTSWGYGCAHPDYP 433
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGC 239
++ +C G EG DTCQGD G PL C G +++ L G+ +WG GC
Sbjct: 794 KISADMICAGNPEGGVDTCQGDSGGPLVCQHG-NQWFLTGVTSWGHGC 840
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLAC--PIGDSRYKLAGLVAWGIGCGQ 245
R+ ++ +C G ++G D+CQGD G P C P ++ L G+ +WG GC +
Sbjct: 388 RITENMLCAGMRQGGVDSCQGDSGGPFVCTNPENPRQWTLVGVTSWGKGCAR 439
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 9 AVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHD-SFVCXGGQEGRDTCQGDGGAPLACP 185
A L++ E+ + N +C+ + G + D S VC GG GR CQGD G PL C
Sbjct: 544 AEFLQEAELVVASNAKCDK-----KNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCN 597
Query: 186 IGDSRYKLAGLVAWG 230
R+ L G+V+WG
Sbjct: 598 EA-GRWVLRGIVSWG 611
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 45.2 bits (102), Expect = 5e-05
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 9 AVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHD-SFVCXGGQEGRDTCQGDGGAPLACP 185
A L++ E+ + N +C+ + G + D S VC GG GR CQGD G PL C
Sbjct: 84 AEFLQEAELVVASNAKCDK-----KNGELLPVDDASMVCAGGP-GRGGCQGDSGGPLVCN 137
Query: 186 IGDSRYKLAGLVAWG 230
R+ L G+V+WG
Sbjct: 138 EA-GRWVLRGIVSWG 151
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEG-RDTCQGDGGAPLACPIG 191
+LK++++ V + C + T T+ R+ C G G RD C+GD G+P+
Sbjct: 874 VLKQVQLPFVSHRVCQ--VNHTNAITK-RMR----CAGDVMGERDACKGDSGSPIVVKRT 926
Query: 192 DSRYKLAGLVAWGIGCGQK 248
D + GL +WG GC QK
Sbjct: 927 DGSWSAVGLSSWGEGCAQK 945
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +3
Query: 15 ILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEGR-DTCQGDGGAPLACPIG 191
IL++ ++ +VP +CNS ++ G + +C G + G D CQ D G PLAC
Sbjct: 130 ILREAQVQLVPQDKCNS--PQSYNG---EVSGRALCAGFERGGVDACQYDSGGPLACE-E 183
Query: 192 DSRYKLAGLVAWGIGCG 242
R+ L G+V++G CG
Sbjct: 184 RGRWYLTGVVSYGHECG 200
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 138 GRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGC 239
G D+CQGD G P+ C + R+ L G+V+WG GC
Sbjct: 273 GIDSCQGDSGGPMVCE-NNGRFYLDGVVSWGHGC 305
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 227 GHRVRAEGRAAVYANVARMRSWVDRKMNA 313
GH G+ VYA V ++ W++ +NA
Sbjct: 302 GHGCAGRGKFGVYAKVRYVKEWIESYINA 330
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 111 SFVCXGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWG 230
S +C GGQ CQGD G P C G ++ L G V+WG
Sbjct: 135 SMICAGGQRAAGGCQGDSGGPFVCNEG-GKWVLRGAVSWG 173
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +3
Query: 120 CXG-GQEGRDTCQGDGGAPLACPI---GDSRYKLAGLVAWGIGCGQK 248
C G G+ G DTC+GD G + G R+ AG+V+WG GCG K
Sbjct: 218 CAGEGKGGNDTCRGDSGGSFVREVRREGKYRWVSAGIVSWGEGCGIK 264
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Frame = +3
Query: 18 LKKIEIDMVPNPRCN-----SLLQRTRLGTRFRLHDSFVCXG--GQEGRDTCQGDGGAPL 176
L++ ++ +V N C+ S R GT +R+ ++ +C G G+ G++ C GD G P
Sbjct: 174 LQQADLRVVSNRACSERHMGSKNMRLENGT-WRVTETMLCAGDAGKTGKNGCNGDSGGPF 232
Query: 177 ACPIGDSRYKLAGLVAWG 230
C ++ L G+V+WG
Sbjct: 233 VCRNTAGQWVLQGVVSWG 250
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQ 245
++ S +C G +G D CQ D G PL G+ R+ + G +WG GC +
Sbjct: 277 KIDSSMLCAGLDKGGIDACQRDSGGPLVSKTGE-RFYIHGATSWGYGCAR 325
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +3
Query: 111 SFVCXGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWG 230
S +C GG G CQGD G P C G R+ L G V+WG
Sbjct: 242 SMICAGGM-GMGGCQGDSGGPFVCNEG-GRWVLRGAVSWG 279
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 7/41 (17%)
Frame = +3
Query: 144 DTCQGDGGAPL-------ACPIGDSRYKLAGLVAWGIGCGQ 245
D CQGD G P A P G R+ L G+++WG GCG+
Sbjct: 304 DACQGDSGGPFSVDNPLPATPKGQHRHVLLGVISWGDGCGK 344
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 117 VCXGGQEG-RDTCQGDGGAPLACPIGDSRYKLAGLVAWGIG-CGQKDV 254
+C G + +C GD G P C D RY L G V+WG G C K +
Sbjct: 2 LCAGVENSILSSCHGDSGGPYVCVQPDGRYVLQGDVSWGSGKCDAKQM 49
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 111 SFVCXGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWG 230
+ +C GG G C GD G PL C G + + L G V+WG
Sbjct: 482 TMICAGGS-GSSACSGDSGGPLVCHEGGT-WVLRGAVSWG 519
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 108 DSFVCXGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAW 227
+S +C GG G C GD G PL C + + R+ L G+ +W
Sbjct: 456 NSMICAGGA-GSSACNGDSGGPLQC-LENERWVLRGVASW 493
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQE-GRDTCQGDGGAPLACPIGD 194
L+++ + +V + +C++ T L ++ C G + + C GD G PL C G
Sbjct: 439 LQEVGLPLVNHSQCHA----TYLTASRKITPRMRCAGTEGVAKAVCSGDSGGPLVCERG- 493
Query: 195 SRYKLAGLVAWGIGCGQ 245
R+ L GL +WG C Q
Sbjct: 494 GRWFLMGLSSWGWVCPQ 510
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 18 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQE-GRDTCQGDGGAPLACPIGD 194
L+++ + +V + +C++ T L ++ C G + + C GD G PL C G
Sbjct: 688 LQEVGLPLVNHSQCHA----TYLTASRKITPRMRCAGTEGVAKAVCSGDSGGPLVCERG- 742
Query: 195 SRYKLAGLVAWGIGCGQ 245
R+ L GL +WG C Q
Sbjct: 743 GRWFLMGLSSWGWVCPQ 759
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.9 bits (79), Expect = 0.033
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 108 DSFVCXGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAW 227
++ +C GG G C GD G PL C G ++ L G+ +W
Sbjct: 107 ETMMCVGGA-GSSACNGDSGGPLVCEEG-GKWVLRGVASW 144
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 35.5 bits (78), Expect = 0.044
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +3
Query: 9 AVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEGRDTCQGDGGAPLACPI 188
A +L++ + +V C + ++R + T + F G C GD G P C
Sbjct: 1471 ASVLQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISG---CFGDSGGPFVCQG 1527
Query: 189 GDSRYKLAGLVAWG 230
+ R+ + G+V+WG
Sbjct: 1528 SNKRWNIQGVVSWG 1541
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 35.5 bits (78), Expect = 0.044
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 18 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHD-SFVCXGGQEGRDTCQGDGGAPLACPIGD 194
L++ + ++ N +C + + +++ D S VC GG G C GD G PL C +
Sbjct: 105 LQQSRVSIIENNKC-----KVKNDCHYKVLDKSMVCAGGA-GSSICHGDSGGPLQCE-EN 157
Query: 195 SRYKLAGLVAW 227
+ L G+ +W
Sbjct: 158 GHWVLRGVASW 168
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +3
Query: 111 SFVCXGGQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWG 230
S +C GGQ G+ CQGD G P C G LV G
Sbjct: 200 SMICAGGQ-GKGGCQGDSGGPFVCEEGGKWVLRGALVRIG 238
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 35.1 bits (77), Expect = 0.058
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 18 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG-GQEGRDTCQGD-GGAPLACPIG 191
LK+ + +V + CN Q + + + C G G+D CQGD GG +
Sbjct: 263 LKETCMPIVNSHVCNQAFQ----DEGYSVTPNMFCAGQASGGKDICQGDSGGGFVLYDSA 318
Query: 192 DSRYKLAGLVAWG--IGCG 242
++ L G+V+WG +GCG
Sbjct: 319 KQKWFLGGVVSWGSSLGCG 337
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 111 SFVCXG--GQEGRDTCQGDGGAPLACPIGDSRYKLAGLVAWGIGCGQK 248
S +C G + +CQGD G PL C + R+ L G ++G C K
Sbjct: 489 SHICVGFNTENAASSCQGDSGGPLVCE-EEGRWVLHGATSFGKSCSPK 535
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 150 CQGDGGAPLACPIGDSRYKLAGLVAWG 230
C GD G PL C + R+ L G V++G
Sbjct: 262 CNGDSGGPLVCE-DNGRWYLHGAVSYG 287
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 34.7 bits (76), Expect = 0.077
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 111 SFVCXGGQEGRDT---CQGDGGAPLACPIGD--SRYKLAGLVAWG 230
S +C G + + C GD G PL C GD S++ L G+ +WG
Sbjct: 287 SMLCAGYNDNKTQTSGCIGDSGGPLMCKAGDRWSKWVLHGVTSWG 331
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 34.7 bits (76), Expect = 0.077
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 AVILKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXG--GQEGRDTCQGDGGAPLAC 182
A +L++ I +V + C + + R + + +C G G C GD G P C
Sbjct: 427 ARLLQQARIPVVSSEECERVNNKHRKVDKVTM----LCAGNGGNSSISGCHGDSGGPFVC 482
Query: 183 PIGDSRYKLAGLVAWGIGCGQKDV 254
GD R+ L G V + + +V
Sbjct: 483 MGGDGRWVLRGAVRMTVSLAKVNV 506
>SB_24599| Best HMM Match : Complex1_24kDa (HMM E-Value=0)
Length = 487
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 128 GTGGQGHLPGRRWSPPGLSHR*QPLQAGRAGRLGHRVRAEGRA 256
G GQ +PG+R P GL R QP +G+ R R EG A
Sbjct: 250 GKRGQPKVPGKRRQPKGLGKRGQPKDSGKR-RAAQGFRKEGAA 291
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 141 RDTCQGDGGAPLACPIGDSRYKLAGLVAWGI-GC 239
+ TC+GD G PL C R+ L G+ +W GC
Sbjct: 1967 KGTCKGDSGGPLVCE-SKGRWVLMGVTSWSYNGC 1999
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +3
Query: 93 RFRLHDSFVCXGGQEGR-DTCQGDGGAPL 176
R ++H+S +C G G D CQGD G P+
Sbjct: 486 RGQIHESMLCAGLDAGGVDACQGDSGGPM 514
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 99 RLHDSFVCXGGQEGR-DTCQGDGGAPLACPIGDSRYKLAG 215
R+ +C G G D C GDGG+PL C + +AG
Sbjct: 1400 RVTAQMLCAGPAAGESDNCFGDGGSPLMCQGASREWFVAG 1439
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 31.5 bits (68), Expect = 0.72
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 18 LKKIEIDMVPNPRCNSLLQRTRLGTRFRLHDSFVCXGGQEGR-DTCQGDGGAPL 176
L++ ++ +VP CN L + GT +H +C G +EG D CQ D G PL
Sbjct: 101 LREAKVRLVPTWVCN--LVNSYNGT---IHSRALCAGFKEGGVDACQYDSGGPL 149
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 31.1 bits (67), Expect = 0.95
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +3
Query: 63 SLLQRTRLGTRFRLHDS--FVCXGGQEGRDTCQGDGGAPLACPIGDS------RYKLAGL 218
+L+ R R R +D +C G TC D G+PL P+ + R+ L G+
Sbjct: 821 TLVHRHRCSWALRNYDGNRLLCAGFLTSDVTCISDSGSPLMFPVPHAQNPNVKRWILGGI 880
Query: 219 VAWGI 233
++WG+
Sbjct: 881 LSWGL 885
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 150 CQGDGGAPLACPIGDSRYKLAGLVAWGIG 236
CQGD G PL C + ++ L G+V++G G
Sbjct: 127 CQGDSGGPLVCE-RNGQWTLYGVVSFGAG 154
>SB_23352| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1830
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 332 WWFRNPTRSSSGRPMTSCGPRWRRPRHVLLPAPDAPGDQPGQLVAAVTYGTGQGGSTV-A 156
W NP S SG T+ PR H + P P P VAA T G+ G+ + +
Sbjct: 1678 WLTPNPALSFSGVSTTTLRPRNMLTAHSVFPDPPLPARYILAEVAA-TRSHGRLGAVLGS 1736
Query: 155 LASVPALLSPXA 120
LA P L P A
Sbjct: 1737 LAKHPDLFGPQA 1748
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +3
Query: 108 DSFVCXG--GQEGRDTCQGDGGAPLACPIGDSRYKLAGLV 221
DS VC G G C GD G P C D R+ L G++
Sbjct: 224 DSMVCAGDAGITKTSGCYGDSGGPFVCKTAD-RWVLQGVL 262
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 293 PMTSCGPRWRRPRHVLLPAPDAPGDQPGQLVAA 195
P C P W P VL+ PG +PG V +
Sbjct: 3592 PYCLCSPGWTGPTCVLIVTAPNPGQRPGSRVVS 3624
>SB_54793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 181 QARGAPPSPWQVSLPSCP--PXHTKLSCRRNLVPSLVRCSSELQR 53
Q+ P +P +VS+ SCP P R++ P V CSS L R
Sbjct: 238 QSVSCPTTPQEVSIRSCPTTPVEVSPDASRDMAP--VTCSSLLSR 280
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = -3
Query: 323 RNPTRSSSGRPMTSCGPRWRRPRHVLLPAPDAPGDQP---GQLVAAVTYGTGQGGSTVAL 153
R P G+PM S P P+ VL P PG+Q G V Y QG
Sbjct: 155 RIPHPQQGGQPMYSSPPAGMGPQLVLGSQPFIPGNQQSPYGVSPGQVDYSQMQGPIQFR- 213
Query: 152 ASVPALLSPXAHEAVVQTEPGPKSGSLQQR 63
+ P ++P A+ PGP + Q +
Sbjct: 214 SGQPGFVTPMAYPGF--AHPGPTTMQQQMQ 241
>SB_20133| Best HMM Match : Extensin_2 (HMM E-Value=2.1)
Length = 762
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/78 (30%), Positives = 32/78 (41%)
Frame = +2
Query: 17 TEENRNRYGAEPSLQFAAAANQTWDQVPSARQLRVXWGTGGQGHLPGRRWSPPGLSHR*Q 196
T+ NR +G S Q AA + + Q R GT H P R + G+ + Q
Sbjct: 294 TKANRRLFGIPGSRQCPVAALKLYIQK------RNDEGTEAFFHTPNRHFKETGVWYTPQ 347
Query: 197 PLQAGRAGRLGHRVRAEG 250
P GRL + AEG
Sbjct: 348 PTGKNTLGRLMKDIAAEG 365
>SB_961| Best HMM Match : CUB (HMM E-Value=3.4e-08)
Length = 490
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = -3
Query: 215 PGQLVAAVTYGTGQGGSTVALASVPALLSPXAHEAVVQTEPGPKSGSLQQRIAARVRHHI 36
P + + T + GS+ A P E T P +G+L + RVRH
Sbjct: 234 PIEPTSMTTVTSSSNGSSTASLKTTEHSKPTDPELPTTTAPHKSTGTLIPSVGGRVRHSN 293
Query: 35 DF 30
DF
Sbjct: 294 DF 295
>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
Length = 1203
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 250 TCRGLRQRGPHEVMGRPEDERVGLRNHH 333
TC+ ++Q+ E++ ED R G R HH
Sbjct: 755 TCKQIKQQEGREILRLMEDGRYGHRGHH 782
>SB_28668| Best HMM Match : UCH (HMM E-Value=8e-12)
Length = 893
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 241 PHPMPQATSPASL*RLSPMGQARGAPPSPWQVSLPSCPP---XHTKLSCRRNL-VPSLVR 74
PH M Q PA + P A PP P + P+ P TK + RR+L P+L +
Sbjct: 583 PHTMQQGQPPAIQIKQQPQPPAVEPPPEPKPKAKPATPDRLMQPTKSNLRRSLSSPNLAK 642
>SB_13076| Best HMM Match : NUC202 (HMM E-Value=3)
Length = 472
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 204 CSGCHLWDRPGGLHRRPGKCP 142
CSG HL R G ++RP CP
Sbjct: 338 CSGTHLHGRGVGANQRPETCP 358
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 27.9 bits (59), Expect = 8.8
Identities = 33/110 (30%), Positives = 42/110 (38%), Gaps = 12/110 (10%)
Frame = -1
Query: 367 RFYFGNVLNSVSGGSVTPRVHLPVDP*PHAGHVGV-----DRGTSFCPHP-------MPQ 224
R FG+V + + VTP P P PH G+ R +F P+P P
Sbjct: 3017 RMEFGDVDDVIRHFQVTPIEFGPSHPIPHTHKGGLRTLSPTRTRAFAPYPPHAQGLSHPM 3076
Query: 223 ATSPASL*RLSPMGQARGAPPSPWQVSLPSCPPXHTKLSCRRNLVPSLVR 74
+ L LSP + R P P PS P HT R L P+ R
Sbjct: 3077 PHTHIGLCTLSPR-RTRAFAPYPPHAQGPSHPIPHTHKGL-RTLSPTRTR 3124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,775,941
Number of Sequences: 59808
Number of extensions: 505877
Number of successful extensions: 1551
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1526
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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