Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00834
(739 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D578C8 Cluster: PREDICTED: similar to poly A bin... 151 2e-35
UniRef50_Q5T3B0 Cluster: Poly(A) binding protein, cytoplasmic 4;... 146 4e-34
UniRef50_Q13310 Cluster: Polyadenylate-binding protein 4 (Poly(A... 146 4e-34
UniRef50_Q4SJ33 Cluster: Chromosome 21 SCAF14577, whole genome s... 127 2e-28
UniRef50_UPI000065E5EA Cluster: Polyadenylate-binding protein 1-... 124 2e-27
UniRef50_Q8ISR8 Cluster: Polyadenylate binding protein; n=7; Coe... 122 7e-27
UniRef50_A7SSV8 Cluster: Predicted protein; n=1; Nematostella ve... 117 3e-25
UniRef50_Q4VXT5 Cluster: Chromosome 20 open reading frame 119; n... 116 5e-25
UniRef50_P21187 Cluster: Polyadenylate-binding protein (Poly(A)-... 107 4e-22
UniRef50_Q7K797 Cluster: Putative uncharacterized protein pab-1;... 99 1e-19
UniRef50_A1EAA0 Cluster: Polyadenylate-binding protein; n=3; Pla... 94 3e-18
UniRef50_Q7RDM4 Cluster: PolyA binding protein-related; n=5; Pla... 91 2e-17
UniRef50_Q5CLX5 Cluster: Poly(A)-binding protein fabm; n=3; Cryp... 91 3e-17
UniRef50_UPI000069E108 Cluster: UPI000069E108 related cluster; n... 89 1e-16
UniRef50_Q4UID9 Cluster: Polyadenylate (Poly(A)) binding protein... 87 3e-16
UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplas... 86 7e-16
UniRef50_Q5KBW2 Cluster: Polyadenylate-binding protein, cytoplas... 85 1e-15
UniRef50_Q2GSX8 Cluster: Polyadenylate-binding protein, cytoplas... 85 1e-15
UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2; ... 83 7e-15
UniRef50_Q10N87 Cluster: Polyadenylate binding protein, types 1,... 83 9e-15
UniRef50_Q5YBC0 Cluster: Polyadenylate binding protein; n=1; Hel... 81 2e-14
UniRef50_A7ARL3 Cluster: Polyadenylate binding protein, putative... 78 3e-13
UniRef50_A4S0L2 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 76 1e-12
UniRef50_UPI0000D577C9 Cluster: PREDICTED: similar to poly(A) bi... 74 4e-12
UniRef50_Q05196 Cluster: Polyadenylate-binding protein 5 (Poly(A... 74 4e-12
UniRef50_A3AVD4 Cluster: Putative uncharacterized protein; n=3; ... 73 1e-11
UniRef50_Q5DA36 Cluster: SJCHGC06322 protein; n=3; Bilateria|Rep... 73 1e-11
UniRef50_Q4FW55 Cluster: Poly(A) binding protein, putative; n=6;... 69 2e-10
UniRef50_UPI0000D56085 Cluster: PREDICTED: similar to CG9484-PA;... 66 6e-10
UniRef50_Q9ZQA8 Cluster: Probable polyadenylate-binding protein ... 66 6e-10
UniRef50_O95071 Cluster: E3 ubiquitin-protein ligase EDD1; n=30;... 66 6e-10
UniRef50_Q9LT82 Cluster: Poly(A)-binding protein-like; n=1; Arab... 62 2e-08
UniRef50_UPI00015B526D Cluster: PREDICTED: similar to ubiquitin-... 56 1e-06
UniRef50_O96606 Cluster: Polyadenylate-binding protein 1; n=6; T... 55 2e-06
UniRef50_A2YEJ3 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_Q178F7 Cluster: Ubiquitin-protein ligase; n=1; Aedes ae... 54 4e-06
UniRef50_UPI0000E4A36C Cluster: PREDICTED: similar to zinc finge... 54 5e-06
UniRef50_P51592 Cluster: E3 ubiquitin-protein ligase hyd; n=14; ... 53 8e-06
UniRef50_Q54BM2 Cluster: RNA-binding region-containing protein; ... 52 2e-05
UniRef50_Q6CG61 Cluster: Similar to sp|P31209 Schizosaccharomyce... 49 1e-04
UniRef50_Q4TBX5 Cluster: Chromosome undetermined SCAF7082, whole... 48 2e-04
UniRef50_A5BL38 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q4QA88 Cluster: Poly(A)-binding protein, putative; n=3;... 48 3e-04
UniRef50_A7SCP7 Cluster: Predicted protein; n=2; Nematostella ve... 48 3e-04
UniRef50_A7NTZ5 Cluster: Chromosome chr18 scaffold_1, whole geno... 47 4e-04
UniRef50_A6XGR1 Cluster: PolyA-binding protein; n=1; Polytomella... 44 0.004
UniRef50_A7TSM7 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_P04147 Cluster: Polyadenylate-binding protein, cytoplas... 41 0.028
UniRef50_Q23D16 Cluster: Putative uncharacterized protein; n=1; ... 40 0.064
UniRef50_Q4UDS0 Cluster: Putative uncharacterized protein; n=1; ... 37 0.45
UniRef50_Q5C2H5 Cluster: SJCHGC03468 protein; n=1; Schistosoma j... 36 0.78
UniRef50_A5D2L7 Cluster: Suppresse phage shock protein A; n=2; P... 35 1.8
UniRef50_Q68EM7 Cluster: Rho GTPase-activating protein 17; n=49;... 35 1.8
UniRef50_A6EVH2 Cluster: Lipoprotein, putative; n=1; Marinobacte... 34 3.2
UniRef50_Q6CNP4 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 34 4.2
UniRef50_Q9EN01 Cluster: AMV047; n=1; Amsacta moorei entomopoxvi... 33 5.5
UniRef50_Q2ND92 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q6BTN8 Cluster: Similar to CA5836|IPF428 Candida albica... 33 7.3
UniRef50_Q611Y9 Cluster: Putative uncharacterized protein CBG168... 33 9.7
UniRef50_A3GH19 Cluster: Predicted protein; n=4; Saccharomycetal... 33 9.7
>UniRef50_UPI0000D578C8 Cluster: PREDICTED: similar to poly A
binding protein, cytoplasmic 1 isoform 2; n=2;
Coelomata|Rep: PREDICTED: similar to poly A binding
protein, cytoplasmic 1 isoform 2 - Tribolium castaneum
Length = 558
Score = 151 bits (365), Expect = 2e-35
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +1
Query: 1 NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEI 180
N Q AVHIQGQEPLT+TMLAAAP QEQKQMLGERLFPLIQRM+PDLAGKITGMLLEI
Sbjct: 460 NAAPVQQAVHIQGQEPLTATMLAAAPPQEQKQMLGERLFPLIQRMYPDLAGKITGMLLEI 519
Query: 181 DNSELLHMLEHAESLKAKVDEAVAV 255
DNSELLHMLEH ESLKAKV+EAVAV
Sbjct: 520 DNSELLHMLEHNESLKAKVEEAVAV 544
>UniRef50_Q5T3B0 Cluster: Poly(A) binding protein, cytoplasmic 4;
n=6; Euarchontoglires|Rep: Poly(A) binding protein,
cytoplasmic 4 - Homo sapiens (Human)
Length = 194
Score = 146 bits (355), Expect = 4e-34
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 95 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 154
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 155 ELLHMLESPESLRSKVDEAVAV 176
>UniRef50_Q13310 Cluster: Polyadenylate-binding protein 4
(Poly(A)-binding protein 4) (PABP 4) (Inducible
poly(A)-binding protein); n=244; Eukaryota|Rep:
Polyadenylate-binding protein 4 (Poly(A)-binding protein
4) (PABP 4) (Inducible poly(A)-binding protein) - Homo
sapiens (Human)
Length = 644
Score = 146 bits (355), Expect = 4e-34
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 601 ELLHMLESPESLRSKVDEAVAV 622
>UniRef50_Q4SJ33 Cluster: Chromosome 21 SCAF14577, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 21
SCAF14577, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 380
Score = 127 bits (307), Expect = 2e-28
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +1
Query: 37 GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHA 216
GQEPLT++MLAAAPL EQKQMLGERLFPLIQ MH LAGKITGMLLEIDNSELLHMLE
Sbjct: 285 GQEPLTTSMLAAAPLHEQKQMLGERLFPLIQAMHLSLAGKITGMLLEIDNSELLHMLESP 344
Query: 217 ESLKAKVDEAVAV 255
ESL++KVDEAVAV
Sbjct: 345 ESLRSKVDEAVAV 357
>UniRef50_UPI000065E5EA Cluster: Polyadenylate-binding protein
1-like.; n=3; Euteleostomi|Rep: Polyadenylate-binding
protein 1-like. - Takifugu rubripes
Length = 648
Score = 124 bits (299), Expect = 2e-27
Identities = 58/77 (75%), Positives = 69/77 (89%)
Frame = +1
Query: 7 PAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDN 186
P +P+V+IQGQEPLT++MLAAAPL +QKQ+LGERL+PLI +HP+LAGKITGMLLEIDN
Sbjct: 572 PVLEPSVYIQGQEPLTASMLAAAPLMDQKQLLGERLYPLISTLHPNLAGKITGMLLEIDN 631
Query: 187 SELLHMLEHAESLKAKV 237
SELLHMLE ESL +KV
Sbjct: 632 SELLHMLETPESLHSKV 648
>UniRef50_Q8ISR8 Cluster: Polyadenylate binding protein; n=7;
Coelomata|Rep: Polyadenylate binding protein -
Spodoptera frugiperda (Fall armyworm)
Length = 86
Score = 122 bits (295), Expect = 7e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = +1
Query: 1 NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGML 171
NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGML
Sbjct: 30 NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGML 86
>UniRef50_A7SSV8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 584
Score = 117 bits (282), Expect = 3e-25
Identities = 57/75 (76%), Positives = 65/75 (86%)
Frame = +1
Query: 37 GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHA 216
GQEPL ++LAAA QEQKQMLGERLFPLIQ HPD+AGKITGMLLEIDN+ELLHMLE
Sbjct: 492 GQEPLNPSVLAAATPQEQKQMLGERLFPLIQTNHPDMAGKITGMLLEIDNAELLHMLESR 551
Query: 217 ESLKAKVDEAVAVCR 261
++L+ KVDEAV+V R
Sbjct: 552 DALQMKVDEAVSVLR 566
>UniRef50_Q4VXT5 Cluster: Chromosome 20 open reading frame 119; n=6;
Homo sapiens|Rep: Chromosome 20 open reading frame 119 -
Homo sapiens (Human)
Length = 171
Score = 116 bits (280), Expect = 5e-25
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 196 LHMLEHAESLKAK 234
L MLE ESL AK
Sbjct: 134 LLMLESPESLHAK 146
>UniRef50_P21187 Cluster: Polyadenylate-binding protein
(Poly(A)-binding protein); n=6; Bilateria|Rep:
Polyadenylate-binding protein (Poly(A)-binding protein)
- Drosophila melanogaster (Fruit fly)
Length = 634
Score = 107 bits (256), Expect = 4e-22
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>UniRef50_Q7K797 Cluster: Putative uncharacterized protein pab-1;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein pab-1 - Caenorhabditis elegans
Length = 586
Score = 98.7 bits (235), Expect = 1e-19
Identities = 52/83 (62%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 PQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDL--AGKITGMLLEIDN 186
PQ V I GQEPLTS MLAAA QEQKQ+LGER++ LI++++P AGKITGM+LEIDN
Sbjct: 498 PQGIV-IGGQEPLTSAMLAAAAPQEQKQLLGERIYALIEKLYPGHKDAGKITGMMLEIDN 556
Query: 187 SELLHMLEHAESLKAKVDEAVAV 255
SEL+ ML+ +E ++KVDEA +V
Sbjct: 557 SELIMMLQDSELFRSKVDEAASV 579
>UniRef50_A1EAA0 Cluster: Polyadenylate-binding protein; n=3;
Plasmodium|Rep: Polyadenylate-binding protein -
Plasmodium falciparum
Length = 875
Score = 94.3 bits (224), Expect = 3e-18
Identities = 45/77 (58%), Positives = 56/77 (72%)
Frame = +1
Query: 25 VHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHM 204
V+ LT+ LA+AP QKQ+LGE LFPL+ HP LAGKITGM+LE+DNSELL +
Sbjct: 794 VNFNNNSTLTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLIL 853
Query: 205 LEHAESLKAKVDEAVAV 255
LE+ E LK K+DEA+ V
Sbjct: 854 LENEEQLKKKIDEALVV 870
>UniRef50_Q7RDM4 Cluster: PolyA binding protein-related; n=5;
Plasmodium (Vinckeia)|Rep: PolyA binding protein-related
- Plasmodium yoelii yoelii
Length = 859
Score = 91.5 bits (217), Expect = 2e-17
Identities = 43/68 (63%), Positives = 54/68 (79%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 228
LT+ LA+AP QKQ+LGE LFPL+ HP LAGKITGM+LE+DNSELL +LE+ + LK
Sbjct: 768 LTAAALASAPPSMQKQVLGENLFPLVANYHPTLAGKITGMMLEMDNSELLILLENEDQLK 827
Query: 229 AKVDEAVA 252
K+DEA+A
Sbjct: 828 KKIDEALA 835
>UniRef50_Q5CLX5 Cluster: Poly(A)-binding protein fabm; n=3;
Cryptosporidium|Rep: Poly(A)-binding protein fabm -
Cryptosporidium hominis
Length = 746
Score = 90.6 bits (215), Expect = 3e-17
Identities = 48/85 (56%), Positives = 59/85 (69%)
Frame = +1
Query: 1 NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEI 180
NP PQP V PLT+ LAAA QKQ+LGERLFP+I + P+LAGKITGM+LE+
Sbjct: 658 NPLIPQPDV------PLTAATLAAASPSMQKQLLGERLFPIIAQFQPELAGKITGMMLEM 711
Query: 181 DNSELLHMLEHAESLKAKVDEAVAV 255
DN+ELL +L +K KVDEA+ V
Sbjct: 712 DNNELLELLSSDIEIKNKVDEAMVV 736
>UniRef50_UPI000069E108 Cluster: UPI000069E108 related cluster; n=1;
Xenopus tropicalis|Rep: UPI000069E108 UniRef100 entry -
Xenopus tropicalis
Length = 405
Score = 89.0 bits (211), Expect = 1e-16
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = +1
Query: 19 PAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 198
PA+ +QGQEPLT ++L +A EQKQMLG RLFPL+Q + LA KITG+LLE D SE++
Sbjct: 304 PAICVQGQEPLTISLLVSASPHEQKQMLGVRLFPLVQIIDKKLAEKITGILLEFDTSEII 363
Query: 199 HMLEHAESLKAKVDEAVAV 255
+MLE E L+ ++AV +
Sbjct: 364 YMLESPELLRTMANKAVTL 382
>UniRef50_Q4UID9 Cluster: Polyadenylate (Poly(A)) binding protein,
putative; n=2; Theileria|Rep: Polyadenylate (Poly(A))
binding protein, putative - Theileria annulata
Length = 664
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/58 (68%), Positives = 49/58 (84%)
Frame = +1
Query: 88 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCR 261
QKQM+GERLFP+I R +PDLAGKITGM+LEIDN ELL +LE + LKAK+DEA+ V +
Sbjct: 604 QKQMIGERLFPIIARDNPDLAGKITGMMLEIDNHELLQLLEDNDQLKAKIDEAIKVLK 661
>UniRef50_Q1DXH0 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=11;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Coccidioides immitis
Length = 768
Score = 86.2 bits (204), Expect = 7e-16
Identities = 42/69 (60%), Positives = 54/69 (78%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 228
LT +L AAP +QKQMLGE ++P IQ P+LAGKITGMLLE+DN+ELL +++ +LK
Sbjct: 665 LTLQVLNAAPPAQQKQMLGEAIYPKIQAQQPELAGKITGMLLEMDNAELLALVDDDAALK 724
Query: 229 AKVDEAVAV 255
AKVDEA+ V
Sbjct: 725 AKVDEALTV 733
>UniRef50_Q5KBW2 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=2;
Eukaryota|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 673
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 228
L + LA A EQKQMLGE L+PLI P+LAGKITGMLLE+DN+ELLH++E +L+
Sbjct: 572 LDAQSLARAAPAEQKQMLGEALYPLIHETQPELAGKITGMLLEMDNAELLHLVESQPALQ 631
Query: 229 AKVDEAVAV 255
KVDEA+ V
Sbjct: 632 EKVDEALRV 640
>UniRef50_Q2GSX8 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=6;
Pezizomycotina|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Chaetomium globosum (Soil fungus)
Length = 783
Score = 85.4 bits (202), Expect = 1e-15
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 PPAPQPAV--HIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLE 177
PPA A + L S + A Q+QKQ+LGE LFP IQ + PDLAGKITGMLLE
Sbjct: 662 PPAGPLAAGGELNASSLLQSQLTATNNPQQQKQILGENLFPKIQALQPDLAGKITGMLLE 721
Query: 178 IDNSELLHMLEHAESLKAKVDEAVAV 255
+DN+EL+++LE +L AKV+EA+AV
Sbjct: 722 MDNAELVNLLEDEAALVAKVNEAMAV 747
>UniRef50_A6RJZ8 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 790
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/69 (59%), Positives = 55/69 (79%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 228
L + + A AP Q+QKQ+LGE LFP IQ + P+LAGKITGMLLE++N EL++++E SL+
Sbjct: 694 LQAQVQAVAP-QQQKQILGEALFPKIQVLQPELAGKITGMLLEMENQELINLIEDDASLR 752
Query: 229 AKVDEAVAV 255
AKVDEA+ V
Sbjct: 753 AKVDEALTV 761
>UniRef50_Q10N87 Cluster: Polyadenylate binding protein, types 1, 2,
3, 4 family protein, expressed; n=4; Magnoliophyta|Rep:
Polyadenylate binding protein, types 1, 2, 3, 4 family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 647
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +1
Query: 55 STMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 234
+ +LA AP +EQK MLG RL+PL++R HPDLA KITGMLLE+ NSE++ +L + L AK
Sbjct: 553 NNLLATAPPEEQKNMLGNRLYPLVERHHPDLASKITGMLLELGNSEVVMLLYSSNMLSAK 612
Query: 235 VDEAV 249
++E V
Sbjct: 613 IEECV 617
>UniRef50_Q5YBC0 Cluster: Polyadenylate binding protein; n=1;
Helicosporidium sp. ex Simulium jonesii|Rep:
Polyadenylate binding protein - Helicosporidium sp.
subsp. Simulium jonesii (Green alga)
Length = 107
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/75 (54%), Positives = 55/75 (73%)
Frame = +1
Query: 37 GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHA 216
G P S +LA+A ++QKQ+LGE+LFP + + P+LA KITGMLLE+DNSEL+ ++E
Sbjct: 9 GGVPQLSAILASASPEQQKQLLGEQLFPKVAQHQPELAAKITGMLLEMDNSELVLLIETP 68
Query: 217 ESLKAKVDEAVAVCR 261
E+L KV EAV V R
Sbjct: 69 EALADKVAEAVEVLR 83
>UniRef50_A7ARL3 Cluster: Polyadenylate binding protein, putative;
n=1; Babesia bovis|Rep: Polyadenylate binding protein,
putative - Babesia bovis
Length = 585
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/85 (44%), Positives = 55/85 (64%)
Frame = +1
Query: 7 PAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDN 186
P PA + Q P+ + KQM+GERLFP++ R +P+LAGKITGM+LE+DN
Sbjct: 505 PNGAPAAAVPTQRPIDGAAM-------HKQMIGERLFPIVARENPELAGKITGMMLEMDN 557
Query: 187 SELLHMLEHAESLKAKVDEAVAVCR 261
EL+ +LE+ + LK K+ EA+ V +
Sbjct: 558 QELMALLENEQQLKDKIQEAMRVLK 582
>UniRef50_A4S0L2 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 572
Score = 75.8 bits (178), Expect = 1e-12
Identities = 40/86 (46%), Positives = 55/86 (63%)
Frame = +1
Query: 4 PPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEID 183
P P PA L S + AAAP +Q+ +LGE L+PLI+ A KITGMLLE+D
Sbjct: 481 PMPPMPAEAANPMAILASQLSAAAP-DQQRMILGEALYPLIESKDAANAAKITGMLLEMD 539
Query: 184 NSELLHMLEHAESLKAKVDEAVAVCR 261
SE+LH++E ++L +KV EA+AV +
Sbjct: 540 QSEVLHLIESPDALTSKVQEALAVLK 565
>UniRef50_UPI0000D577C9 Cluster: PREDICTED: similar to poly(A)
binding protein, cytoplasmic 1; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to poly(A) binding
protein, cytoplasmic 1 - Tribolium castaneum
Length = 565
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = +1
Query: 76 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
P + K+MLGER++ +I++ +P++AGKITGMLLEID SEL ++ + SLKAKV+EAVAV
Sbjct: 494 PGADDKRMLGERMYRVIEKTYPEIAGKITGMLLEIDISELKALVNNEGSLKAKVEEAVAV 553
>UniRef50_Q05196 Cluster: Polyadenylate-binding protein 5
(Poly(A)-binding protein 5); n=47; Viridiplantae|Rep:
Polyadenylate-binding protein 5 (Poly(A)-binding protein
5) - Arabidopsis thaliana (Mouse-ear cress)
Length = 668
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/71 (49%), Positives = 51/71 (71%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 228
L S + A+P + +MLG+ L+PL+++ P A K+TGMLLE+D +E+LH+LE E+LK
Sbjct: 578 LASDLALASP-DKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALK 636
Query: 229 AKVDEAVAVCR 261
AKV EA+ V R
Sbjct: 637 AKVSEALDVLR 647
>UniRef50_A3AVD4 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 611
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/71 (49%), Positives = 53/71 (74%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLK 228
LTS + A P ++Q+ +LGE L+PL++ + + A K+TGMLLE+D +E+LH+LE E+LK
Sbjct: 516 LTSALANANP-EQQRTILGESLYPLVELLEQNHAAKVTGMLLEMDQTEVLHLLESPEALK 574
Query: 229 AKVDEAVAVCR 261
+KV EA+ V R
Sbjct: 575 SKVAEAMDVLR 585
>UniRef50_Q5DA36 Cluster: SJCHGC06322 protein; n=3; Bilateria|Rep:
SJCHGC06322 protein - Schistosoma japonicum (Blood
fluke)
Length = 721
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/74 (50%), Positives = 53/74 (71%)
Frame = +1
Query: 34 QGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEH 213
QGQ LT + LA +QK+ LGE LFP IQ M+P LA K+TGMLL +DN+E++++LE
Sbjct: 615 QGQ--LTISALAQLSEVDQKRALGEHLFPRIQTMYPTLARKLTGMLLGVDNAEVINLLES 672
Query: 214 AESLKAKVDEAVAV 255
+ L+AK +E ++V
Sbjct: 673 DDLLRAKCEEGISV 686
>UniRef50_Q4FW55 Cluster: Poly(A) binding protein, putative; n=6;
Trypanosomatidae|Rep: Poly(A) binding protein, putative
- Leishmania major strain Friedlin
Length = 594
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +1
Query: 34 QGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEH 213
QGQ + +LA ++QK +LGERL+ I R HP +A KITGMLLE+DN+E+L+ML+
Sbjct: 516 QGQN--LAAVLANLNPEQQKNVLGERLYSYIVRSHPSVAAKITGMLLEMDNAEILNMLDS 573
Query: 214 AESLKAKVDEA 246
L +K+ EA
Sbjct: 574 PTMLDSKIAEA 584
>UniRef50_UPI0000D56085 Cluster: PREDICTED: similar to CG9484-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG9484-PA
- Tribolium castaneum
Length = 2849
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = +1
Query: 19 PAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 198
P + G P T L +Q LG+RL+P + +HP+ AG+ITGMLLE+ ++LL
Sbjct: 2445 PDLSTSGGNP-TGNQNRNEQLSAHQQQLGDRLYPKVYNLHPNFAGRITGMLLELSPAQLL 2503
Query: 199 HMLEHAESLKAKVDEAV 249
+L +SL+AKV+EAV
Sbjct: 2504 LLLASEDSLRAKVEEAV 2520
>UniRef50_Q9ZQA8 Cluster: Probable polyadenylate-binding protein
At2g36660 (Poly(A)-binding protein At2g36660); n=1;
Arabidopsis thaliana|Rep: Probable polyadenylate-binding
protein At2g36660 (Poly(A)-binding protein At2g36660) -
Arabidopsis thaliana (Mouse-ear cress)
Length = 609
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 88 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCR 261
+ Q+LGE L PL++++ P LA KITGMLLE+D SELL +L+ E L +VDEA V +
Sbjct: 525 EMQLLGELLHPLVEKLEPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLK 582
>UniRef50_O95071 Cluster: E3 ubiquitin-protein ligase EDD1; n=30;
Euteleostomi|Rep: E3 ubiquitin-protein ligase EDD1 - Homo
sapiens (Human)
Length = 2799
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 76 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2389 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2446
>UniRef50_Q9LT82 Cluster: Poly(A)-binding protein-like; n=1;
Arabidopsis thaliana|Rep: Poly(A)-binding protein-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 61.7 bits (143), Expect = 2e-08
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +1
Query: 64 LAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDE 243
LA+ P +EQ+ ++GE LF +++ + P A KITGM+LE+D ++LH+L ++ K V E
Sbjct: 23 LASLPPKEQRDLIGETLFFMVEELEPQFAPKITGMILELDQDKVLHLLVTPKAFKEMVKE 82
Query: 244 AVAV 255
A+ V
Sbjct: 83 AMEV 86
>UniRef50_UPI00015B526D Cluster: PREDICTED: similar to
ubiquitin-protein ligase; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ubiquitin-protein ligase - Nasonia
vitripennis
Length = 2841
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +1
Query: 79 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEA 246
L +Q LG+RL+P + + P A KITGMLLE++ ++LL +L ESL+ KV+EA
Sbjct: 2442 LTMHQQQLGDRLYPKVYALRPTHAEKITGMLLEMNPAQLLMLLASEESLRQKVEEA 2497
>UniRef50_O96606 Cluster: Polyadenylate-binding protein 1; n=6;
Trypanosomatidae|Rep: Polyadenylate-binding protein 1 -
Leishmania major
Length = 560
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +1
Query: 46 PLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 225
P+T L + QEQ+ LG+RLF + + PD+A KITGM LE+ E +L + L
Sbjct: 484 PITPQELESMSPQEQRAALGDRLFLKVYEIPPDVAPKITGMFLEMKPKEAYELLNDQKRL 543
Query: 226 KAKVDEAVAVCR 261
+ +V EA+ V +
Sbjct: 544 EERVTEALCVLK 555
>UniRef50_A2YEJ3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 276
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/56 (42%), Positives = 42/56 (75%)
Frame = +1
Query: 97 MLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
+L + LFPL++++ + A K+TGMLLE+D +E+L+++E ++L+ KV EA+ V L
Sbjct: 192 ILADMLFPLVEQLVNEKAYKVTGMLLELDKTEVLNLVESPDTLRDKVAEAMKVLEL 247
>UniRef50_Q178F7 Cluster: Ubiquitin-protein ligase; n=1; Aedes
aegypti|Rep: Ubiquitin-protein ligase - Aedes aegypti
(Yellowfever mosquito)
Length = 2833
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = +1
Query: 79 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
L +Q LGERL+P +Q ++ + A KITGMLL++ +++L +L ESL+ K +EA+
Sbjct: 2444 LPAHQQQLGERLYPKVQALYQNNAPKITGMLLDLPATQILMLLASEESLRQKANEAL 2500
>UniRef50_UPI0000E4A36C Cluster: PREDICTED: similar to zinc finger,
SWIM domain containing 2; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to zinc finger, SWIM
domain containing 2 - Strongylocentrotus purpuratus
Length = 972
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = +1
Query: 46 PLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 225
P+ + + L + KQ+LGE LF + +H +ITGMLLE N +++ MLE A L
Sbjct: 768 PMMHQPVQSGRLLDTKQVLGEHLFAKVSELHDGKTDRITGMLLEAKNEDVMRMLEDATFL 827
Query: 226 KAKVDEAVAV 255
+ +++ A+ V
Sbjct: 828 RRRIEGALRV 837
Score = 43.6 bits (98), Expect = 0.005
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 91 KQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVA 252
K+ +GE LF L+ ++ P KITGMLLE+D + +L L+ V ++++
Sbjct: 848 KEQIGEELFTLVSKIEPIQCAKITGMLLELDVKVICRLLTSPSELRQAVQKSLS 901
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Frame = +1
Query: 88 QKQMLGERLFPLI-QRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKV 237
+++ +GE L+ L+ R + A KITGMLLE+ +++L M++ L+ +
Sbjct: 909 RREEMGEHLYGLVASRYTEESAAKITGMLLEMSDTQLHQMMQDKTFLEENI 959
>UniRef50_P51592 Cluster: E3 ubiquitin-protein ligase hyd; n=14;
Diptera|Rep: E3 ubiquitin-protein ligase hyd - Drosophila
melanogaster (Fruit fly)
Length = 2885
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 94 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
Q +GERL+P I ++ A KITGMLLEI +LL ++ E+L+ KV+EA+ +
Sbjct: 2502 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEI 2555
>UniRef50_Q54BM2 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 565
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 85 EQKQMLGERLFPLIQRMHPDLAGKITGMLLE-IDNSELLHMLEHAESLKAKVDEAVAV 255
+Q LGE L+PLI PDLAGKITGMLL+ + EL + + + L K+ EA+ V
Sbjct: 504 QQNVALGEHLYPLIHNSQPDLAGKITGMLLDSLPVEELFTLTQRQDLLADKIREALEV 561
>UniRef50_Q6CG61 Cluster: Similar to sp|P31209 Schizosaccharomyces
pombe Polyadenylate-binding protein; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P31209 Schizosaccharomyces
pombe Polyadenylate-binding protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 589
Score = 48.8 bits (111), Expect = 1e-04
Identities = 27/83 (32%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHP------DLAGKITGMLLE 177
QP + G + +++ AAA Q K+++GE L+P++QR HP D +TG++L+
Sbjct: 488 QPMLQPYGN--IAASVAAAATPQAAKEIVGETLYPIVQR-HPAIGKDADTTAHVTGIMLQ 544
Query: 178 IDNSELLHMLEHAESLKAKVDEA 246
DN+++L LE + L ++ +A
Sbjct: 545 HDNADILSWLEDEQLLNKRIQQA 567
>UniRef50_Q4TBX5 Cluster: Chromosome undetermined SCAF7082, whole
genome shotgun sequence; n=3; Clupeocephala|Rep:
Chromosome undetermined SCAF7082, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 216
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +1
Query: 85 EQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
E + LGE+L+ ++ H D AGKITGMLLE+ L ML SL VD+A+
Sbjct: 5 EDLETLGEKLYTILYPKHKDNAGKITGMLLELPVPVLNQMLRDEASLATAVDKAL 59
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +1
Query: 85 EQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVA 252
E K+ LG+++F L++ + P A ITGMLLE+D + L ++ + L A V +A A
Sbjct: 155 EDKEGLGDKIFSLVEELDPLYANDITGMLLEMDQAALRQLICDRKMLDAAVRKAQA 210
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/54 (35%), Positives = 33/54 (61%)
Frame = +1
Query: 100 LGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCR 261
LGE+LF L+ + + KITGMLLE + +L +L + L+ +V+ A+ + +
Sbjct: 86 LGEQLFELVDIHNTGYSQKITGMLLEQNKDAVLQLLSDPKLLEEQVNSALRILK 139
>UniRef50_A5BL38 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 433
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +1
Query: 49 LTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAE 219
L ST + A +Q+ MLGE L+PL+ ++ ++A K+ G LE+D +E LH+ E E
Sbjct: 377 LASTHASVAS-DQQRTMLGESLYPLLDQLENEMAVKVIGPFLEVDQTEGLHLFESLE 432
>UniRef50_Q4QA88 Cluster: Poly(A)-binding protein, putative; n=3;
Leishmania|Rep: Poly(A)-binding protein, putative -
Leishmania major
Length = 544
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/74 (36%), Positives = 40/74 (54%)
Frame = +1
Query: 34 QGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEH 213
Q Q+ + L+ ++QK LGE L+ I + A KITGMLLE+ E+ +L
Sbjct: 464 QRQDGVDMNYLSTLSPEQQKNYLGELLYSRILPLESSNAAKITGMLLEMSREEIFEILAD 523
Query: 214 AESLKAKVDEAVAV 255
+L +K+ EA AV
Sbjct: 524 HFALLSKIQEANAV 537
>UniRef50_A7SCP7 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 346
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/54 (38%), Positives = 35/54 (64%)
Frame = +1
Query: 94 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
Q LG+R++ +Q+++P LA ++TGMLLE+ +L H+L+ E L + A V
Sbjct: 79 QSLGDRVYGTVQQLYPTLAERVTGMLLEMPADQLNHLLDSREGLLEHIHTAAHV 132
Score = 41.1 bits (92), Expect = 0.028
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 85 EQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHML 207
EQK+ +GE++ I+++HP A ITGMLLE+ +LL+ +
Sbjct: 288 EQKEFIGEKIHDEIRKLHPGHADVITGMLLEMGVDQLLNTI 328
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 82 QEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
++ K ++GE ++ + +P A KITGMLLE++ L + + + L + EAV
Sbjct: 174 EDLKSIIGENIYSQLVEKYPKDADKITGMLLEMELDLLQKVSQDPDLLGQRATEAV 229
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +1
Query: 100 LGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
LG +++ ++ ++P+ A KITGMLL+ E+ +L + L ++ A ++
Sbjct: 15 LGAKIYDVVFEIYPNEADKITGMLLDGGEEEVASLLSDEKRLNERIIAAASL 66
>UniRef50_A7NTZ5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 244
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = +1
Query: 136 HPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCR 261
H D A +TGMLLE+D +E+LH+LE E+LK+KV EA+ V R
Sbjct: 179 HTDKA-VLTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLR 219
>UniRef50_A6XGR1 Cluster: PolyA-binding protein; n=1; Polytomella
parva|Rep: PolyA-binding protein - Polytomella parva
Length = 362
Score = 44.0 bits (99), Expect = 0.004
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Frame = +1
Query: 10 APQPAVHIQGQ---EPLTSTMLAAAPLQEQKQMLGERLFPLIQRM--------HP--DLA 150
AP P V G E T+ L +EQK+++G +L+ IQ + +P ++
Sbjct: 245 APPPVVEEAGAVEIETFTAASLVDRSPEEQKRIIGNKLYLQIQNIFNTTVTTQYPLEEVC 304
Query: 151 GKITGMLLEIDNSELLHMLEHAESLKAKVDEA 246
GKITGMLLE+ ELL +++ E+L +V A
Sbjct: 305 GKITGMLLEMSVDELLMVMDSNETLTEQVQAA 336
>UniRef50_A7TSM7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 264
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 QEQKQMLGERLFPLIQRMHPD--LAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVA 252
Q+Q+Q LGE L+ + D AGKITGM+L++ E++ +LE+ E + EA A
Sbjct: 189 QKQRQALGEELYKKVSAKTSDEEAAGKITGMILDLPPQEVMPLLENNELFEQHFKEAFA 247
>UniRef50_P04147 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=14;
Dikarya|Rep: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein) - Saccharomyces
cerevisiae (Baker's yeast)
Length = 577
Score = 41.1 bits (92), Expect = 0.028
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +1
Query: 82 QEQKQMLGERLFPLI--QRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVA 252
Q+Q+Q LGE+L+ + + + + AGKITGM+L++ E+ +LE E + EA A
Sbjct: 503 QKQRQALGEQLYKKVSAKTSNEEAAGKITGMILDLPPQEVFPLLESDELFEQHYKEASA 561
>UniRef50_Q23D16 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 763
Score = 39.9 bits (89), Expect = 0.064
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Frame = +1
Query: 4 PPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPD----LAGKITGML 171
P AP PA Q P ++ +++KQ+LG+ L + + P+ LAGKIT +L
Sbjct: 667 PKAPAPAPKQQLYIPKIEDLVDKTD-EQKKQLLGKPLMEKVGQSLPEHQKPLAGKITNLL 725
Query: 172 LEI---DNSELLHMLEHAESLKAKVDEAV 249
L+ + E++ ML +A+ LK + A+
Sbjct: 726 LDFEIYEPEEIISMLSNADELKENIGTAL 754
>UniRef50_Q4UDS0 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 1279
Score = 37.1 bits (82), Expect = 0.45
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 7 PAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDN 186
P P+P IQ Q+P+ T + P+Q+Q+Q L + + P Q+ P L ++ + + D+
Sbjct: 676 PVPEPVQQIQQQQPVHETQSQSEPVQQQQQPLKQPV-PGPQKKQPVLEPEVVTISISDDS 734
Query: 187 SE 192
E
Sbjct: 735 DE 736
>UniRef50_Q5C2H5 Cluster: SJCHGC03468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03468 protein - Schistosoma
japonicum (Blood fluke)
Length = 299
Score = 36.3 bits (80), Expect = 0.78
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = +1
Query: 109 RLFPLIQRM--HPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
RLF +Q + + L +ITGMLLE+ +SE +L + E+L +V+EA A+
Sbjct: 1 RLFTRVQSIVRNEHLTARITGMLLELPSSEHSVLLANEEALSNRVEEARAL 51
>UniRef50_A5D2L7 Cluster: Suppresse phage shock protein A; n=2;
Peptococcaceae|Rep: Suppresse phage shock protein A -
Pelotomaculum thermopropionicum SI
Length = 460
Score = 35.1 bits (77), Expect = 1.8
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +1
Query: 40 QEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAE 219
QE + AAA L E+ +M G+ + + Q DL LL + E++ EH
Sbjct: 243 QEAVAGQKEAAAALAEKVEMAGQHEYLMTQMAEKDL-------LLALRKREIIRYREHLN 295
Query: 220 SLKAKVDEAVAVCRL 264
L+AK + + CRL
Sbjct: 296 KLEAKANSILYQCRL 310
>UniRef50_Q68EM7 Cluster: Rho GTPase-activating protein 17; n=49;
Euteleostomi|Rep: Rho GTPase-activating protein 17 - Homo
sapiens (Human)
Length = 881
Score = 35.1 bits (77), Expect = 1.8
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 810 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 869
Query: 172 LEIDN 186
L+IDN
Sbjct: 870 LDIDN 874
>UniRef50_A6EVH2 Cluster: Lipoprotein, putative; n=1; Marinobacter
algicola DG893|Rep: Lipoprotein, putative - Marinobacter
algicola DG893
Length = 289
Score = 34.3 bits (75), Expect = 3.2
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 79 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
+ +++ GER ++ +AG +T +L + D L H+LE AE+++ D V
Sbjct: 222 MSNYEEVRGERYQQMMSDSRAAMAGLMTDLLQQADQRHLDHLLEQAENMRGDFDTLACV 280
>UniRef50_Q6CNP4 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 298
Score = 33.9 bits (74), Expect = 4.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 6 TSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVST 122
++ST+SS P T TS + +STTP T T T ++T
Sbjct: 78 STSTSSSTSPSTSTSTSTFTSTSTTPSTTTTPTSTPITT 116
>UniRef50_Q9EN01 Cluster: AMV047; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV047 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 259
Score = 33.5 bits (73), Expect = 5.5
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = -2
Query: 618 NQTEMNVSKVLKQL*LKINFLV-NVKVKEFINSQRRNVTVTYFCL*TC--TL*SYIR-VH 451
N E+ + +L + L N + N +K+ I N+ V YFC TC S IR +
Sbjct: 25 NFYELKLENILDNIDLTNNCIYCNDVIKDKIIIDTNNIKVGYFCTITCKHIYYSIIRTIF 84
Query: 450 N-PLLIFLRFLYVFFFNEFDYILSKNIKQI 364
N P+ + F+ F +E I KNIK I
Sbjct: 85 NLPIHKIINFIPFFLLSEESKIKYKNIKNI 114
>UniRef50_Q2ND92 Cluster: Putative uncharacterized protein; n=1;
Erythrobacter litoralis HTCC2594|Rep: Putative
uncharacterized protein - Erythrobacter litoralis
(strain HTCC2594)
Length = 270
Score = 33.1 bits (72), Expect = 7.3
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 64 LAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGML-LEIDNSEL--LHMLEHAESLKAK 234
L A PL Q++ + ERL PL++R+ +L K+ G + L +D L+ LE E ++
Sbjct: 31 LLATPLTPQQRAVVERLVPLVKRLPRELQAKLEGKINLFLDQVTFRGLNDLEVREEMQLS 90
Query: 235 VDEAVAVCRLI 267
+ A C L+
Sbjct: 91 I--AAQACLLV 99
>UniRef50_Q6BTN8 Cluster: Similar to CA5836|IPF428 Candida albicans;
n=2; Saccharomycetaceae|Rep: Similar to CA5836|IPF428
Candida albicans - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 240
Score = 33.1 bits (72), Expect = 7.3
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 565 YFKLKLFENFRYIHFSLIYYLILWELALVLSFIITFTSVF 684
+FK +L NF Y+ FS +L W L+ V + I F VF
Sbjct: 108 FFKNELIANFLYMFFSFAGFLAFWLLSWVTTNFILFIIVF 147
>UniRef50_Q611Y9 Cluster: Putative uncharacterized protein CBG16847;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG16847 - Caenorhabditis
briggsae
Length = 1111
Score = 32.7 bits (71), Expect = 9.7
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 12 STTSSAY-PRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENA 137
+TTS AY P T T+ Y ++TTP E D TTVS E +
Sbjct: 1051 TTTSKAYQPPTTTTRSYEVPTTTTPSREVDVPTTTVSYTQETS 1093
>UniRef50_A3GH19 Cluster: Predicted protein; n=4;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 505
Score = 32.7 bits (71), Expect = 9.7
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 565 YFKLKLFENFRYIHFSLIYYLILWELALVLSFIITFTSVF 684
YFK +L NF YI S + Y + W A ++ F VF
Sbjct: 373 YFKTELMANFVYIILSTLGYFVFWLFAATNWVVLLFLVVF 412
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,456,926
Number of Sequences: 1657284
Number of extensions: 10565826
Number of successful extensions: 34784
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 32839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34731
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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