Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00834
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 146 5e-35
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 146 5e-35
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 146 5e-35
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 146 5e-35
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 146 5e-35
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 146 5e-35
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 146 5e-35
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 146 5e-35
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 146 5e-35
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 146 5e-35
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 146 5e-35
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 146 5e-35
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 146 5e-35
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 146 5e-35
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 145 2e-34
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 144 3e-34
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 143 5e-34
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 143 5e-34
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 143 5e-34
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 143 5e-34
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 143 5e-34
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 131 3e-30
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 130 7e-30
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 130 7e-30
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 130 7e-30
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 130 7e-30
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 130 7e-30
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 128 2e-29
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 128 2e-29
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 128 2e-29
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 118 3e-26
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 116 7e-26
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 116 7e-26
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 66 9e-11
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 66 9e-11
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 66 9e-11
AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open read... 55 2e-07
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 35 0.27
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 35 0.27
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 35 0.27
AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 35 0.27
AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 35 0.27
AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 33 0.81
AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2 pr... 32 1.9
AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2 pr... 32 1.9
AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein prot... 32 1.9
AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein. 32 1.9
AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens ... 31 5.7
AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens ... 31 5.7
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 601 ELLHMLESPESLRSKVDEAVAV 622
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 601 ELLHMLESPESLRSKVDEAVAV 622
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 617 ELLHMLESPESLRSKVDEAVAV 638
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 617 ELLHMLESPESLRSKVDEAVAV 638
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 528 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 587
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 588 ELLHMLESPESLRSKVDEAVAV 609
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 601 ELLHMLESPESLRSKVDEAVAV 622
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 617 ELLHMLESPESLRSKVDEAVAV 638
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 512 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 571
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 572 ELLHMLESPESLRSKVDEAVAV 593
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 307 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 366
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 367 ELLHMLESPESLRSKVDEAVAV 388
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 95 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 154
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 155 ELLHMLESPESLRSKVDEAVAV 176
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 541 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 600
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 601 ELLHMLESPESLRSKVDEAVAV 622
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 557 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 616
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 617 ELLHMLESPESLRSKVDEAVAV 638
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 512 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 571
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 572 ELLHMLESPESLRSKVDEAVAV 593
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 146 bits (355), Expect = 5e-35
Identities = 71/82 (86%), Positives = 77/82 (93%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 255 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 314
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEAVAV
Sbjct: 315 ELLHMLESPESLRSKVDEAVAV 336
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 145 bits (351), Expect = 2e-34
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +1
Query: 10 APQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNS 189
APQPAVH+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNS
Sbjct: 268 APQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNS 327
Query: 190 ELLHMLEHAESLKAKVDEAVAV 255
ELLHMLE ESL++KVDEA AV
Sbjct: 328 ELLHMLESPESLRSKVDEAAAV 349
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 144 bits (349), Expect = 3e-34
Identities = 69/81 (85%), Positives = 75/81 (92%)
Frame = +1
Query: 13 PQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSE 192
P PAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSE
Sbjct: 419 PHPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSE 478
Query: 193 LLHMLEHAESLKAKVDEAVAV 255
LLHMLE ESL++KVDEAVAV
Sbjct: 479 LLHMLESPESLRSKVDEAVAV 499
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 143 bits (347), Expect = 5e-34
Identities = 69/80 (86%), Positives = 75/80 (93%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
QPAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 531 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 590
Query: 196 LHMLEHAESLKAKVDEAVAV 255
LHMLE ESL++KVDEAVAV
Sbjct: 591 LHMLESPESLRSKVDEAVAV 610
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 143 bits (347), Expect = 5e-34
Identities = 69/80 (86%), Positives = 75/80 (93%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
QPAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 196 LHMLEHAESLKAKVDEAVAV 255
LHMLE ESL++KVDEAVAV
Sbjct: 594 LHMLESPESLRSKVDEAVAV 613
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 143 bits (347), Expect = 5e-34
Identities = 69/80 (86%), Positives = 75/80 (93%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
QPAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 196 LHMLEHAESLKAKVDEAVAV 255
LHMLE ESL++KVDEAVAV
Sbjct: 594 LHMLESPESLRSKVDEAVAV 613
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 143 bits (347), Expect = 5e-34
Identities = 69/80 (86%), Positives = 75/80 (93%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
QPAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 196 LHMLEHAESLKAKVDEAVAV 255
LHMLE ESL++KVDEAVAV
Sbjct: 594 LHMLESPESLRSKVDEAVAV 613
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 143 bits (347), Expect = 5e-34
Identities = 69/80 (86%), Positives = 75/80 (93%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
QPAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 534 QPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 593
Query: 196 LHMLEHAESLKAKVDEAVAV 255
LHMLE ESL++KVDEAVAV
Sbjct: 594 LHMLESPESLRSKVDEAVAV 613
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 131 bits (316), Expect = 3e-30
Identities = 65/80 (81%), Positives = 72/80 (90%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
QPA+H+QGQEPLT +MLA+AP QEQKQMLGE LFPLIQ MHP LAGKITG+LLEIDNSEL
Sbjct: 45 QPAIHVQGQEPLTVSMLASAP-QEQKQMLGEWLFPLIQAMHPTLAGKITGVLLEIDNSEL 103
Query: 196 LHMLEHAESLKAKVDEAVAV 255
LHML+ ESL +KVDEAVAV
Sbjct: 104 LHMLKSPESLHSKVDEAVAV 123
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 130 bits (313), Expect = 7e-30
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
Q AVH+QGQE LT++ LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L+MLE ESL++KVDEAVAV
Sbjct: 589 LYMLESPESLRSKVDEAVAV 608
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 130 bits (313), Expect = 7e-30
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
Q AVH+QGQE LT++ LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L+MLE ESL++KVDEAVAV
Sbjct: 589 LYMLESPESLRSKVDEAVAV 608
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 130 bits (313), Expect = 7e-30
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
Q AVH+QGQE LT++ LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L+MLE ESL++KVDEAVAV
Sbjct: 589 LYMLESPESLRSKVDEAVAV 608
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 130 bits (313), Expect = 7e-30
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
Q AVH+QGQE LT++ LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L+MLE ESL++KVDEAVAV
Sbjct: 589 LYMLESPESLRSKVDEAVAV 608
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 130 bits (313), Expect = 7e-30
Identities = 64/80 (80%), Positives = 72/80 (90%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
Q AVH+QGQE LT++ LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSEL
Sbjct: 529 QLAVHVQGQETLTASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSEL 588
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L+MLE ESL++KVDEAVAV
Sbjct: 589 LYMLESPESLRSKVDEAVAV 608
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 128 bits (310), Expect = 2e-29
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L MLE ESL AK+DEAVAV
Sbjct: 134 LLMLESPESLHAKIDEAVAV 153
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 128 bits (310), Expect = 2e-29
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 520 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 579
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L MLE ESL AK+DEAVAV
Sbjct: 580 LLMLESPESLHAKIDEAVAV 599
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 128 bits (310), Expect = 2e-29
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 520 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 579
Query: 196 LHMLEHAESLKAKVDEAVAV 255
L MLE ESL AK+DEAVAV
Sbjct: 580 LLMLESPESLHAKIDEAVAV 599
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 118 bits (283), Expect = 3e-26
Identities = 57/74 (77%), Positives = 64/74 (86%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 196 LHMLEHAESLKAKV 237
L MLE ESL AK+
Sbjct: 134 LLMLESPESLHAKI 147
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 116 bits (280), Expect = 7e-26
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 74 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 133
Query: 196 LHMLEHAESLKAK 234
L MLE ESL AK
Sbjct: 134 LLMLESPESLHAK 146
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 116 bits (280), Expect = 7e-26
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 195
+PAVHI GQEPLT++MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSEL
Sbjct: 55 EPAVHIPGQEPLTASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSEL 114
Query: 196 LHMLEHAESLKAK 234
L MLE ESL AK
Sbjct: 115 LLMLESPESLHAK 127
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 66.5 bits (155), Expect = 9e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 76 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2388 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2445
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 66.5 bits (155), Expect = 9e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 76 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2389 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2446
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 66.5 bits (155), Expect = 9e-11
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 76 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 249
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+
Sbjct: 2411 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAM 2468
>AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 134
Score = 55.2 bits (127), Expect = 2e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = +1
Query: 16 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLG 105
+PAVHI GQEPLT++MLAAAPL EQKQM+G
Sbjct: 15 EPAVHIPGQEPLTASMLAAAPLHEQKQMIG 44
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 35.1 bits (77), Expect = 0.27
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 810 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 869
Query: 172 LEIDN 186
L+IDN
Sbjct: 870 LDIDN 874
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 35.1 bits (77), Expect = 0.27
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 343 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 402
Query: 172 LEIDN 186
L+IDN
Sbjct: 403 LDIDN 407
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 35.1 bits (77), Expect = 0.27
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 537 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 596
Query: 172 LEIDN 186
L+IDN
Sbjct: 597 LDIDN 601
>AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 726
Score = 35.1 bits (77), Expect = 0.27
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 655 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 714
Query: 172 LEIDN 186
L+IDN
Sbjct: 715 LDIDN 719
>AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein.
Length = 803
Score = 35.1 bits (77), Expect = 0.27
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 732 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 791
Query: 172 LEIDN 186
L+IDN
Sbjct: 792 LDIDN 796
>AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 803
Score = 33.5 bits (73), Expect = 0.81
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 4 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 171
PP PQP VH G LT+T A+ + + + E + +H D A K + G +L
Sbjct: 732 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEVHSDSASKDVPGRIL 791
Query: 172 LEIDN 186
L+IDN
Sbjct: 792 LDIDN 796
>AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2
protein.
Length = 1096
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 PPAPQPAVHIQ--GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLE 177
PP P + ++ G++ + +A+P +L + +M P GK T +L
Sbjct: 514 PPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLS 573
Query: 178 IDNSELLHMLEHAESLKAK 234
+ N +++HM E L+ +
Sbjct: 574 VPNKDVVHMQNDVERLEIR 592
>AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2
protein.
Length = 1096
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 PPAPQPAVHIQ--GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLE 177
PP P + ++ G++ + +A+P +L + +M P GK T +L
Sbjct: 514 PPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLS 573
Query: 178 IDNSELLHMLEHAESLKAK 234
+ N +++HM E L+ +
Sbjct: 574 VPNKDVVHMQNDVERLEIR 592
>AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein
protein.
Length = 1099
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 PPAPQPAVHIQ--GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLE 177
PP P + ++ G++ + +A+P +L + +M P GK T +L
Sbjct: 514 PPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLS 573
Query: 178 IDNSELLHMLEHAESLKAK 234
+ N +++HM E L+ +
Sbjct: 574 VPNKDVVHMQNDVERLEIR 592
>AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein.
Length = 1114
Score = 32.3 bits (70), Expect = 1.9
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 4 PPAPQPAVHIQ--GQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLE 177
PP P + ++ G++ + +A+P +L + +M P GK T +L
Sbjct: 527 PPRPPKTLKLKDGGKKKGKKSRESASPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLS 586
Query: 178 IDNSELLHMLEHAESLKAK 234
+ N +++HM E L+ +
Sbjct: 587 VPNKDVVHMQNDVERLEIR 605
>AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ46362 fis, clone TESTI4050293. ).
Length = 679
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 88 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 225
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
>AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ43950 fis, clone TESTI4015293. ).
Length = 679
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 88 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 225
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,019,264
Number of Sequences: 237096
Number of extensions: 1582839
Number of successful extensions: 4242
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 4032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4239
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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