Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00834
(739 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-bindin... 107 2e-23
AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p pro... 107 2e-23
AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH... 107 2e-23
AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG... 107 2e-23
AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF... 107 2e-23
AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE... 107 2e-23
AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD... 107 2e-23
AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC... 107 2e-23
AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB... 107 2e-23
AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA... 107 2e-23
L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic d... 53 5e-07
AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA... 53 5e-07
BT001711-1|AAN71466.1| 182|Drosophila melanogaster RE67695p pro... 31 2.2
AE014296-1719|AAN11954.1| 182|Drosophila melanogaster CG16707-P... 31 2.2
AE014296-1718|AAN11953.1| 182|Drosophila melanogaster CG16707-P... 31 2.2
AE014296-1717|AAN11952.1| 183|Drosophila melanogaster CG16707-P... 31 2.2
AE014296-1716|AAF50218.1| 183|Drosophila melanogaster CG16707-P... 31 2.2
AY071754-1|AAL49376.1| 195|Drosophila melanogaster RH61722p pro... 30 3.8
AE014298-471|AAF45831.1| 195|Drosophila melanogaster CG14419-PA... 30 3.8
AE014298-2362|AAS65385.1| 326|Drosophila melanogaster CG33251-P... 29 8.7
>L05109-1|AAA70421.1| 632|Drosophila melanogaster poly(A)-binding
protein protein.
Length = 632
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 529 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 588
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 589 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 624
>AY118528-1|AAM49897.1| 634|Drosophila melanogaster LD24412p
protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2628|AAS64811.1| 634|Drosophila melanogaster CG5119-PH,
isoform H protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2627|AAM68178.1| 634|Drosophila melanogaster CG5119-PG,
isoform G protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2626|AAF57747.1| 634|Drosophila melanogaster CG5119-PF,
isoform F protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2625|AAM68177.1| 634|Drosophila melanogaster CG5119-PE,
isoform E protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2624|AAM68176.1| 634|Drosophila melanogaster CG5119-PD,
isoform D protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2623|AAF57746.1| 634|Drosophila melanogaster CG5119-PC,
isoform C protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2622|AAF57745.1| 634|Drosophila melanogaster CG5119-PB,
isoform B protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>AE013599-2621|AAM68175.1| 634|Drosophila melanogaster CG5119-PA,
isoform A protein.
Length = 634
Score = 107 bits (256), Expect = 2e-23
Identities = 58/96 (60%), Positives = 74/96 (77%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 NPPAPQ-----PAVH-IQGQ--EPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGK 156
NPP PQ P +QG+ E L +++LA A QEQKQ+LGERL+P+I+ MH +LAGK
Sbjct: 531 NPPVPQLHQTQPIPQQLQGKNSEKLIASLLANAKPQEQKQILGERLYPMIEHMHANLAGK 590
Query: 157 ITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVCRL 264
ITGMLLEI+NSELLHM+E E+LKAKV+EAVAV ++
Sbjct: 591 ITGMLLEIENSELLHMIEDQEALKAKVEEAVAVLQV 626
>L14644-1|AAB88625.1| 2895|Drosophila melanogaster hyperplastic discs
protein protein.
Length = 2895
Score = 52.8 bits (121), Expect = 5e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 94 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
Q +GERL+P I ++ A KITGMLLEI +LL ++ E+L+ KV+EA+ +
Sbjct: 2512 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEI 2565
>AE014297-1012|AAF54431.2| 2885|Drosophila melanogaster CG9484-PA
protein.
Length = 2885
Score = 52.8 bits (121), Expect = 5e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 94 QMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 255
Q +GERL+P I ++ A KITGMLLEI +LL ++ E+L+ KV+EA+ +
Sbjct: 2502 QQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIEI 2555
>BT001711-1|AAN71466.1| 182|Drosophila melanogaster RE67695p
protein.
Length = 182
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 6 TSSTTSSAYPRTRTSDLYYAC--SSTTPGTETDAWGTTVST 122
T TT+S P + TS A SSTTP T T GTT +T
Sbjct: 76 TEKTTTSTTPASTTSSTTPASTTSSTTPATTTTTPGTTSTT 116
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP 140
+STTSS P + TS A ++TTPGT + + ST + P
Sbjct: 86 ASTTSSTTPASTTSSTTPATTTTTPGTTSTTTPSPNSTTTTPPP 129
>AE014296-1719|AAN11954.1| 182|Drosophila melanogaster CG16707-PB,
isoform B protein.
Length = 182
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 6 TSSTTSSAYPRTRTSDLYYAC--SSTTPGTETDAWGTTVST 122
T TT+S P + TS A SSTTP T T GTT +T
Sbjct: 76 TEKTTTSTTPASTTSSTTPASTTSSTTPATTTTTPGTTSTT 116
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP 140
+STTSS P + TS A ++TTPGT + + ST + P
Sbjct: 86 ASTTSSTTPASTTSSTTPATTTTTPGTTSTTTPSPNSTTTTPPP 129
>AE014296-1718|AAN11953.1| 182|Drosophila melanogaster CG16707-PA,
isoform A protein.
Length = 182
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 6 TSSTTSSAYPRTRTSDLYYAC--SSTTPGTETDAWGTTVST 122
T TT+S P + TS A SSTTP T T GTT +T
Sbjct: 76 TEKTTTSTTPASTTSSTTPASTTSSTTPATTTTTPGTTSTT 116
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP 140
+STTSS P + TS A ++TTPGT + + ST + P
Sbjct: 86 ASTTSSTTPASTTSSTTPATTTTTPGTTSTTTPSPNSTTTTPPP 129
>AE014296-1717|AAN11952.1| 183|Drosophila melanogaster CG16707-PD,
isoform D protein.
Length = 183
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 6 TSSTTSSAYPRTRTSDLYYAC--SSTTPGTETDAWGTTVST 122
T TT+S P + TS A SSTTP T T GTT +T
Sbjct: 77 TEKTTTSTTPASTTSSTTPASTTSSTTPATTTTTPGTTSTT 117
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP 140
+STTSS P + TS A ++TTPGT + + ST + P
Sbjct: 87 ASTTSSTTPASTTSSTTPATTTTTPGTTSTTTPSPNSTTTTPPP 130
>AE014296-1716|AAF50218.1| 183|Drosophila melanogaster CG16707-PC,
isoform C protein.
Length = 183
Score = 30.7 bits (66), Expect = 2.2
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 6 TSSTTSSAYPRTRTSDLYYAC--SSTTPGTETDAWGTTVST 122
T TT+S P + TS A SSTTP T T GTT +T
Sbjct: 77 TEKTTTSTTPASTTSSTTPASTTSSTTPATTTTTPGTTSTT 117
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVSTYSENAP 140
+STTSS P + TS A ++TTPGT + + ST + P
Sbjct: 87 ASTTSSTTPASTTSSTTPATTTTTPGTTSTTTPSPNSTTTTPPP 130
>AY071754-1|AAL49376.1| 195|Drosophila melanogaster RH61722p
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVST 122
S+TT+S P T TS STTP T TT +T
Sbjct: 69 STTTTSTTPSTTTSTTPSTTPSTTPSTTPSTTTTTTTT 106
>AE014298-471|AAF45831.1| 195|Drosophila melanogaster CG14419-PA
protein.
Length = 195
Score = 29.9 bits (64), Expect = 3.8
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 9 SSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTVST 122
S+TT+S P T TS STTP T TT +T
Sbjct: 69 STTTTSTTPSTTTSTTPSTTPSTTPSTTPSTTTTTTTT 106
>AE014298-2362|AAS65385.1| 326|Drosophila melanogaster CG33251-PA
protein.
Length = 326
Score = 28.7 bits (61), Expect = 8.7
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 40 QEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGML--LEIDNSELLHMLEH 213
+ PL + PL E+ L ERL PL++R+ P L ++ +L LE L +LE
Sbjct: 25 EPPLMERLRERDPLLERLDPLLERLDPLLERLDP-LLERLDPLLERLEPLLERLDPLLER 83
Query: 214 AESLKAKVD 240
E L ++D
Sbjct: 84 LEPLLERLD 92
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,883,956
Number of Sequences: 53049
Number of extensions: 490588
Number of successful extensions: 1691
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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