Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00833
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 28 0.11
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 1.0
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 3.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 4.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 4.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 4.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 4.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 4.1
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 22 7.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 7.2
AB006152-1|BAA24504.1| 178|Apis mellifera inositol 1,4,5-tripho... 22 7.2
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 9.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 9.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.5
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 27.9 bits (59), Expect = 0.11
Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 419 IMDKKSYQKESSTKNVCSFSCIDIRNNVIF-NLALSYLNYPTQLIFKSCKLIPVMIGSII 595
I++ SY K+ T+ + + + I+ NL + LN+P + + K + P + +
Sbjct: 183 ILESISYVKDDGTEGIAKSGDVLVETEPIYYNLTMVKLNWPKKRVTKMSSINPCIFDNAT 242
Query: 596 IM 601
I+
Sbjct: 243 IV 244
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 419 IMDKKSYQKESSTKNVCSFSCIDIRNNVIFNLALSYLNYP-TQLIFKSCKLIPV 577
++ + QK+S KN+ + C+ +V+ + +N P T +I S +P+
Sbjct: 804 VISSRKEQKKSEEKNI-NDHCVTTEQSVVVTNVTTTINTPTTSVISMSGTTVPI 856
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.0 bits (47), Expect = 3.1
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +2
Query: 374 NLSAIYDYNVIELRRIMDKKSYQKESSTKNVCSFSCIDIRNNVIFNLALSY--LNYPTQL 547
N ++ Y R D+K ++ K + S S I NN L Y +NY Q+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQI 111
Query: 548 IFKSCKLIPVMIGSII 595
+PV G+ +
Sbjct: 112 PVPVPIPVPVYYGNFL 127
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.1
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 374 NLSAIYDYNVIELRRIMDKKSYQKESSTKNVCSFSCIDIRNNVIFNLALSY--LNYPTQL 547
N ++ Y R D+K ++ K + S S I NN L Y +NY Q+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQI 111
Query: 548 IFKSCKLIPVMIGS 589
+PV G+
Sbjct: 112 PVPVPVPVPVYYGN 125
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.1
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 374 NLSAIYDYNVIELRRIMDKKSYQKESSTKNVCSFSCIDIRNNVIFNLALSY--LNYPTQL 547
N ++ Y R D+K ++ K + S S I NN L Y +NY Q+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQI 111
Query: 548 IFKSCKLIPVMIGS 589
+PV G+
Sbjct: 112 PVPVPVPVPVYYGN 125
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.6 bits (46), Expect = 4.1
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 374 NLSAIYDYNVIELRRIMDKKSYQKESSTKNVCSFSCIDIRNNVIFNLALSY--LNYPTQL 547
N ++ Y R D+K ++ K + S S I NN L Y +NY Q+
Sbjct: 52 NENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQI 111
Query: 548 IFKSCKLIPVMIGS 589
+PV G+
Sbjct: 112 PVPVPVPVPVYYGN 125
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.6 bits (46), Expect = 4.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -2
Query: 670 SKHSQSYTHNNCRYIIQKRITFPHYDNTTNHNWYKFTALEYQLSWIVQI 524
S S HNN Y +Y+N N+N+ + L Y + I QI
Sbjct: 316 SSLSNKTIHNNNNY--NNNNYNNNYNNYNNNNYNNYKKLYYNIINIEQI 362
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.6 bits (46), Expect = 4.1
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +2
Query: 374 NLSAIYDYNVIELRRIMDKKSYQKESSTKNVCSFSCIDIRNNVIFNLALSY--LNYPTQL 547
N ++ Y R D+K ++ K + S S I NN L Y +NY Q+
Sbjct: 285 NENSYRKYRETSKERSRDRKERERSKEPKIISSLSNKTIHNNNNNYKKLQYYNINYIEQI 344
Query: 548 IFKSCKLIPVMIGS 589
+PV G+
Sbjct: 345 PVPVPVPVPVYYGN 358
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 679 LQHITEFRFDWRSSYILSI 735
LQ I + R D+R S +LSI
Sbjct: 55 LQFILDVRLDYRISCLLSI 73
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 753 IIASHSNAKDITRTPIKSKFGDVLESARVNI 661
I ++H+N + + SK G SAR+N+
Sbjct: 458 ISSTHTNDGGLYKCIAASKVGSAEHSARLNV 488
>AB006152-1|BAA24504.1| 178|Apis mellifera inositol
1,4,5-triphosphate recepter protein.
Length = 178
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 679 LQHITEFRFDWRSSYILSI 735
LQ I + R D+R S +LSI
Sbjct: 23 LQFILDVRLDYRISCLLSI 41
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/32 (25%), Positives = 17/32 (53%)
Frame = -2
Query: 619 KRITFPHYDNTTNHNWYKFTALEYQLSWIVQI 524
K + +Y+N N+N+ + Y ++I+ I
Sbjct: 323 KYSNYNNYNNYNNNNYNNYNKKLYYKNYIINI 354
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 9.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 199 SHHLSL*RFPSQNSFYLMTFPLHITY 122
+ HL F S SFYL F + TY
Sbjct: 201 TEHLGYLIFSSTISFYLPLFVMVFTY 226
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 9.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 288 ISNNTGTELIDLI 250
+ NNTG+ L DL+
Sbjct: 124 VENNTGSSLCDLV 136
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 9.5
Identities = 12/57 (21%), Positives = 25/57 (43%)
Frame = +2
Query: 476 SCIDIRNNVIFNLALSYLNYPTQLIFKSCKLIPVMIGSIIIMRKRYSFLDYVAAIVM 646
SC + N +++ SY N + + + KL + GS+ I + + A+ +
Sbjct: 162 SCCNSPENNTCSISNSYTNGCVEALKDTVKLAGTVFGSVAIAIAIVELIGIICALCL 218
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,321
Number of Sequences: 438
Number of extensions: 4335
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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