Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00832
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 155 2e-38
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 132 3e-31
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 120 1e-27
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 98 5e-21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 93 2e-19
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 93 2e-19
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 93 2e-19
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 83 2e-16
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 80 2e-15
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 74 9e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 74 9e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 74 9e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 74 1e-13
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 74 1e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 72 4e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 72 4e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 69 4e-12
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 69 4e-12
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 69 4e-12
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 65 6e-11
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 63 2e-10
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 63 2e-10
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 62 4e-10
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 62 5e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 58 5e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 57 2e-08
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 56 3e-08
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 55 5e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 55 5e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 50 1e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 48 9e-06
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 47 1e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 47 1e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.004
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 38 0.010
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.28
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 30 1.5
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.0
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.6
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 29 2.6
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.5
U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 29 3.5
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.5
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 4.6
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 4.6
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 4.6
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 4.6
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 28 6.1
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 28 8.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 155 bits (377), Expect = 2e-38
Identities = 75/163 (46%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHELLY 146
Query: 436 TMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
+++PT IQ+ WPIAMSG+++++ +TGSGKTLA++LPA+VHI Q +RG+GP
Sbjct: 147 GK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 613 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 741
LVL PTRELAQQ+Q+V+ DF H+ ++ TC+FGGA K QARD
Sbjct: 206 LVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARD 248
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 132 bits (318), Expect = 3e-31
Identities = 62/162 (38%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 439 MGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 615
Y++PTPIQA P A+SG++++ +TGSGKT AY+ PAIVHI +QP ++ G+GP+A+
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAV 342
Query: 616 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 741
++ PTRELA Q+ Q A F + C +GG K EQ+ +
Sbjct: 343 IVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNE 384
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 120 bits (288), Expect = 1e-27
Identities = 58/139 (41%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 510
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 511 AY-QTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 675
+TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 676 HTSYVRNTCVFGGAPKREQ 732
++ V GGA + +Q
Sbjct: 403 KLLGIKTVSVIGGASREDQ 421
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 120 bits (288), Expect = 1e-27
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Frame = +1
Query: 265 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 441
F KNFY + + + EV+ YR + + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 442 GYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
Y +PT IQAQ P MSG++++ +TGSGKTLA++LP HI +QP + GDGPIA++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 619 LAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 741
LAPTRELA Q + A F ++ C +GG EQ D
Sbjct: 383 LAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIAD 423
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 98.3 bits (234), Expect = 5e-21
Identities = 61/177 (34%), Positives = 101/177 (57%), Gaps = 15/177 (8%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 405
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 406 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQ 579
+ G ++ G+++P+PIQ+Q WP+ +SG++ + QTGSGKTLA++LPA++HI+ Q
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
Query: 580 -PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 732
+ D P LVL+PTRELAQQI+ + + Y ++ C++GG + EQ
Sbjct: 150 LAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQ 205
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 505 LVA-YQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 651
L++ QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 652 QQVAADFGHTSYVRNTCVFGGAPKREQARD 741
+ A F + S ++ ++GG RE RD
Sbjct: 239 HKEATKFSYKSNIQTAILYGG---RENYRD 265
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 505 LVA-YQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 651
L++ QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 652 QQVAADFGHTSYVRNTCVFGGAPKREQARD 741
+ A F + S ++ ++GG RE RD
Sbjct: 223 HKEATKFSYKSNIQTAILYGG---RENYRD 249
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 505 LVA-YQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTRELAQQI 651
L++ QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 652 QQVAADFGHTSYVRNTCVFGGAPKREQARD 741
+ A F + S ++ ++GG RE RD
Sbjct: 220 HKEATKFSYKSNIQTAILYGG---RENYRD 246
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 83.4 bits (197), Expect = 2e-16
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 462
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 463 IQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 630
IQ QG P+A+SG++++ TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 631 RELAQQIQQVAAD----FGHTSY--VRNTCVFGGAPKREQARD 741
RELA+QI + + G +R GG P EQA+D
Sbjct: 276 RELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKD 318
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 79.8 bits (188), Expect = 2e-15
Identities = 47/143 (32%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Frame = +1
Query: 349 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTG 525
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++ QTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 526 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQVAADF 672
SGKT A+++P + I P R+ P ALVL+PTREL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 673 GHTSYVRNTCVFGGAPKREQARD 741
+ + + + ++GG RE +D
Sbjct: 274 AYRTPITSALLYGG---RENYKD 293
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 74.1 bits (174), Expect = 9e-14
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILP 555
P + F EAN + +Q+ V GY + TPIQ P+ G +++A QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 556 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 74.1 bits (174), Expect = 9e-14
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILP 555
P + F EAN + +Q+ V GY + TPIQ P+ G +++A QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 556 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 74.1 bits (174), Expect = 9e-14
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILP 555
P + F EAN + +Q+ V GY + TPIQ P+ G +++A QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 556 AIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ + + + G+G P ++L PTRELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 73.7 bits (173), Expect = 1e-13
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILP 555
P + F +++ P +++ V+ GY TPIQ P+ GK+++A QTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 556 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 73.7 bits (173), Expect = 1e-13
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILP 555
P + F +++ P +++ V+ GY TPIQ P+ GK+++A QTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 556 AIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ + + + G +G P ++L PTRELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 72.1 bits (169), Expect = 4e-13
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +1
Query: 373 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYI 549
H +++ V + ++ G+ +PTPIQ + P M GK++VA +TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 550 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 729
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 730 Q 732
Q
Sbjct: 136 Q 136
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 72.1 bits (169), Expect = 4e-13
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +1
Query: 373 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYI 549
H +++ V + ++ G+ +PTPIQ + P M GK++VA +TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 550 LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 729
+P + + R G AL+++PTRELA Q +V + G + +R C+ GG E
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEE 135
Query: 730 Q 732
Q
Sbjct: 136 Q 136
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILPAIVH 567
F EAN + +++ V GY + TPIQ P+ G +++A QTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILPAIVH 567
F EAN + +++ V GY + TPIQ P+ G +++A QTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 68.9 bits (161), Expect = 4e-12
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILPAIVH 567
F EAN + +++ V GY + TPIQ P+ G +++A QTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 568 INNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ ++ + G+G P ++L PTREL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA-YQTGSGKTLAYILPAIVH 567
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 568 INNQPPIRRGDGPIALVLAPTRELAQQIQQV 660
+ +P + LVL PTRELA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPA 558
++ F++ + + +G+ G+++P+ IQ + +GK+++A Q+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 559 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 738
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/120 (30%), Positives = 67/120 (55%), Gaps = 1/120 (0%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPA 558
++ F++ + + +G+ G+++P+ IQ + +GK+++A Q+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 559 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 738
+ I+++ P + ALV+APTRELAQQIQ+V + G V GG R+ R
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQR 142
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 62.1 bits (144), Expect = 4e-10
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Frame = +1
Query: 409 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN--LVAYQTGSGKTLAYILPAIVHI---- 570
P+ V + ++ MG+ EPT IQ+ P A+ + L A +TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 571 --NNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 738
+ + GP AL++APTREL QI + T+ + T + GG + +Q R
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQER 280
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVH 567
F + ++ Q ++TM K TP+QA P + G +++ +TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 568 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 741
++ P G AL+L PTRELA QI + G ++ + + GG QAR+
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARE 203
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVH 567
F + ++ Q ++TM K TP+QA P + G +++ +TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 568 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARD 741
++ P G AL+L PTRELA QI + G ++ + + GG QAR+
Sbjct: 151 LSVDPY-----GIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARE 203
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 58.4 bits (135), Expect = 5e-09
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +1
Query: 376 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYIL 552
N I F++ + + +G+ G+++P+ IQ + P + ++++A Q+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 553 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQ 732
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGED 137
Query: 733 AR 738
R
Sbjct: 138 IR 139
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 56.8 bits (131), Expect = 2e-08
Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPA 558
I F++ + + +G+ G+++P+ IQ + P + ++++A Q+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 559 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 738
+ ++ Q +R AL+L+PTRELA QIQ+V G V+ GG E R
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIR 139
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +1
Query: 427 GVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQPPIRRGDG 603
G+ G+++P+PIQ +A++G++++A + G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 604 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKRE 729
A+V+ PTRELA Q Q+ + ++ GG R+
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRD 153
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Frame = +1
Query: 328 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 507
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 508 VAY-QTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 669
VA TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 670 FGHTSYVRNTCVFGG 714
+ + ++ FGG
Sbjct: 837 LTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Frame = +1
Query: 328 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 507
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 508 VAY-QTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 669
VA TGSGKTLA+++P ++ + ++ P L++APTREL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 670 FGHTSYVRNTCVFGG 714
+ + ++ FGG
Sbjct: 837 LTYETGLKCGLAFGG 851
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 54.8 bits (126), Expect = 6e-08
Identities = 33/99 (33%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHINNQPPIRRGD 600
+ V+ +G+ T IQA+ + GK+++A +TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 601 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGA 717
G ++++PTREL+ Q V ++ S + V GG+
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGS 178
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Frame = +1
Query: 298 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 477
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 478 WPIAMSGKNLVAYQ-TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTREL 639
P +N++A TGSGKTLA+ LP I+ + + + +A+VL PTREL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 640 AQQ 648
A Q
Sbjct: 217 AAQ 219
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVH 567
F E + + +G+ +P+ IQ P A+ GK+++ +TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 568 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQA 735
+ + P LVL PTRELA QI Q G + + GG QA
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQA 156
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 52.4 bits (120), Expect = 3e-07
Identities = 36/106 (33%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Frame = +1
Query: 445 YKEPTPIQAQGWPIAMSGKN--LVAYQTGSGKTLAYILPAIVHI------NNQPPIRRGD 600
+ EPT IQ+ P A+ + L A +TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 601 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQAR 738
GP AL++APTREL QI + T+ + T + GG + +Q R
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQER 113
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Frame = +1
Query: 418 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVHI-----NNQ 579
+ + +K + Y IQ P + G +++ +T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 580 PPIRRGDGPIALVLAPTRELAQQIQQ 657
R+ DGP+AL+LAPTRELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAY-QTGSGKTLAYILPAIVH 567
F + + + + + +G+++ +Q +A+ KN++ +TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 568 INNQPPIRRGD-GPIALVLAPTRELAQQIQQV 660
+ + G GP A+++APT+EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVAY-QTGSGKTLAYIL 552
I F E V + + TM ++ PT IQ P+ + NL+A Q+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 553 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
+ I+ P + LAPT ELA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVAY-QTGSGKTLAYIL 552
I F E V + + TM ++ PT IQ P+ + NL+A Q+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 553 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
+ I+ P + LAPT ELA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 47.6 bits (108), Expect = 9e-06
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVAY-QTGSGKTLAYIL 552
I F E V + + TM ++ PT IQ P+ + NL+A Q+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 553 PAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 675
+ I+ P + LAPT ELA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVAYQTGSGKTLAYILPAIVH 567
FE + +K + P+P+QA+ P+ + G++ LV ++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 568 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 723
+++ R +++ PTRE++ QI++ T + V G A K
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHK 130
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVAYQTGSGKTLAYILPAIVH 567
FE + +K + P+P+QA+ P+ + G++ LV ++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 568 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 723
+++ R +++ PTRE++ QI++ T + V G A K
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTGARTSVYVGGSAHK 130
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPIAMSGKNLV-AYQTGSGKTLAYILPAIVHINNQPPIRRGD 600
+G+K Y +PT IQ +++G ++V A +TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 601 GPIALVLAPTRELAQQ 648
G AL+++PTRELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 45.2 bits (102), Expect = 5e-05
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +1
Query: 382 IQYFEEANFPDYVQQGVKTMGYKEPTPIQA-QGWPIAMSGKNLVAYQTGSGKTLAYILPA 558
++ F E P+ ++ V YK T +Q G + +V TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 559 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG 714
+ I N G AL+L+P+REL QI V F + V GG
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGG 117
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN-LVAYQTGSGKTLAYILP 555
FEE + + ++ + PT +Q++ P + G + L+A +TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPIAMSGKNL-VAYQTGSGKTLAYILPAIVHINNQPPIRRGD 600
+G+ G+++P+ IQ +GK++ + Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 601 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCV 705
++LAP R +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +1
Query: 508 VAYQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSY 687
+A TGSGKT+ Y+LP + + ++P A++L P + L QI + S
Sbjct: 161 IAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKRWNDESG 216
Query: 688 VRNTCVFGGA 717
V GA
Sbjct: 217 VAKVVSLSGA 226
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.28
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = +1
Query: 505 LVAYQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 651
LV TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 133 LVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 508 VAYQTGSGKTLAYILPAIVH 567
V+ TG+GK+L Y LPA+VH
Sbjct: 199 VSLPTGAGKSLCYQLPAVVH 218
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 7 PASERIHSLNKHLQLNPKNNHVW 75
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 93 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 209
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -2
Query: 739 PGLALF*EHHQTHTCYEHKMCVQNLQQLAEFVVL 638
PGL L +HH +HT +H +C+Q + A VL
Sbjct: 21 PGLILG-DHHISHTINQHHLCIQKKRLKAGTTVL 53
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 148 RRIIAEFVASSKFGTTVSTAIIPI 77
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 148 RRIIAEFVASSKFGTTVSTAIIPI 77
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis
zeste white 10 (drosophila) homolog protein 1 protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 653 SKLLQILDTHLMFVTRVCLVVLLKESK 733
+KLL LDT +FVTR C ++ K +K
Sbjct: 372 AKLLFTLDTDTIFVTRRCFAIVSKANK 398
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 504 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 325
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 324 D 322
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 504 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 325
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 324 D 322
+
Sbjct: 86 N 86
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -2
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.3 bits (60), Expect = 6.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 442 GYKEPTPIQAQGW-PIAMSGKN-LVAYQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 615
G+K PIQ Q + + S +N +V GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 616 VLAPTRELAQQI 651
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 444
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 444
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 253 LLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPI 384
LL+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 169 LLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,100,096
Number of Sequences: 27780
Number of extensions: 383579
Number of successful extensions: 1265
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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