Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00830
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064584-1|AAH64584.1|  598|Homo sapiens XRRA1 protein protein.        33   0.83 
AK074152-1|BAB84978.1|  402|Homo sapiens FLJ00225 protein protein.     33   0.83 
CR457249-1|CAG33530.1|  305|Homo sapiens FBXO34 protein.               33   1.1  
BC109121-1|AAI09122.1|  711|Homo sapiens F-box protein 34 protein.     33   1.1  
BC109120-1|AAI09121.1|  711|Homo sapiens F-box protein 34 protein.     33   1.1  
BC095482-1|AAH95482.2|  711|Homo sapiens F-box protein 34 protein.     33   1.1  
AK000732-1|BAA91346.1|  305|Homo sapiens protein ( Homo sapiens ...    33   1.1  

>BC064584-1|AAH64584.1|  598|Homo sapiens XRRA1 protein protein.
          Length = 598

 Score = 33.5 bits (73), Expect = 0.83
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 344 RHCRRLTRKARAHVRSTLATQSRQPYTLHRCPQLRRTKSPNKKCFLPLA 490
           +H   ++RK    V+S +    +QP  LH  P++R TKSP+K    P A
Sbjct: 353 KHHVLMSRKESWKVKSEIPKVPKQPLVLHH-PRMRTTKSPSKDMLEPEA 400


>AK074152-1|BAB84978.1|  402|Homo sapiens FLJ00225 protein protein.
          Length = 402

 Score = 33.5 bits (73), Expect = 0.83
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 344 RHCRRLTRKARAHVRSTLATQSRQPYTLHRCPQLRRTKSPNKKCFLPLA 490
           +H   ++RK    V+S +    +QP  LH  P++R TKSP+K    P A
Sbjct: 50  KHHVLMSRKESWKVKSEIPKVPKQPLVLHH-PRMRTTKSPSKDMLEPEA 97


>CR457249-1|CAG33530.1|  305|Homo sapiens FBXO34 protein.
          Length = 305

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -2

Query: 240 LGSSASGGSTPALENDDEAGGNSSSEEKSGLGGPSI 133
           L  S +  S+ A + +D AGG+S+SEEKSG   P +
Sbjct: 91  LNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFV 126


>BC109121-1|AAI09122.1|  711|Homo sapiens F-box protein 34 protein.
          Length = 711

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -2

Query: 240 LGSSASGGSTPALENDDEAGGNSSSEEKSGLGGPSI 133
           L  S +  S+ A + +D AGG+S+SEEKSG   P +
Sbjct: 497 LNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFV 532


>BC109120-1|AAI09121.1|  711|Homo sapiens F-box protein 34 protein.
          Length = 711

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -2

Query: 240 LGSSASGGSTPALENDDEAGGNSSSEEKSGLGGPSI 133
           L  S +  S+ A + +D AGG+S+SEEKSG   P +
Sbjct: 497 LNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFV 532


>BC095482-1|AAH95482.2|  711|Homo sapiens F-box protein 34 protein.
          Length = 711

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -2

Query: 240 LGSSASGGSTPALENDDEAGGNSSSEEKSGLGGPSI 133
           L  S +  S+ A + +D AGG+S+SEEKSG   P +
Sbjct: 497 LNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFV 532


>AK000732-1|BAA91346.1|  305|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20725 fis, clone HEP13903. ).
          Length = 305

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -2

Query: 240 LGSSASGGSTPALENDDEAGGNSSSEEKSGLGGPSI 133
           L  S +  S+ A + +D AGG+S+SEEKSG   P +
Sbjct: 91  LNESTTKESSEASQLEDAAGGDSASEEKSGSAEPFV 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,368,729
Number of Sequences: 237096
Number of extensions: 2033868
Number of successful extensions: 9265
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9249
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)