Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00829
(715 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 149 3e-36
09_06_0359 + 22508900-22509439 143 1e-34
02_01_0160 + 1116160-1116678 141 4e-34
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 139 2e-33
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 125 3e-29
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 120 9e-28
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 119 2e-27
10_01_0309 + 3417602-3418147 114 6e-26
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 105 3e-23
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 105 5e-23
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 104 6e-23
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 103 1e-22
06_01_0214 + 1634171-1634173,1634263-1634742 84 1e-16
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 81 1e-15
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 79 5e-15
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 78 8e-15
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 68 9e-12
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 66 3e-11
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 62 3e-10
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 60 1e-09
02_01_0086 + 613113-613532 45 5e-05
01_01_0077 - 585670-585787,585921-586687 44 1e-04
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 40 0.003
10_01_0310 + 3425099-3425218 38 0.008
11_06_0322 + 22358505-22358642,22358690-22358791,22359444-223595... 37 0.018
08_02_0053 + 11721658-11721689,11721960-11722710 36 0.032
03_02_0894 + 12226006-12226484,12226601-12226709 30 2.1
07_03_1767 + 29338867-29338912,29339261-29339325,29339571-293396... 29 3.7
12_02_1032 + 25542420-25542573,25543511-25543577,25543816-255439... 29 4.8
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 29 4.8
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11... 28 6.4
01_03_0106 - 12607995-12608327,12608863-12609063 28 6.4
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 6.4
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 149 bits (360), Expect = 3e-36
Identities = 70/107 (65%), Positives = 79/107 (73%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT +G GG+SIYG KF DENF +KHTGPG+LSMANAG
Sbjct: 100 LHFKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGTKFADENFKIKHTGPGLLSMANAGR 159
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
DTNGSQFFITTV TSWLDG+HVVFG V+ GM+VV +IE G QSG P
Sbjct: 160 DTNGSQFFITTVTTSWLDGKHVVFGKVLSGMDVVYKIEAEGQQSGSP 206
Score = 79.4 bits (187), Expect = 3e-15
Identities = 36/68 (52%), Positives = 47/68 (69%), Gaps = 7/68 (10%)
Frame = +1
Query: 76 RVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG-------YKGSIFHRVI 234
+V+FDV +D P G++V+ L PKT ENFRALCTG+ G G +KGS FHR+I
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 235 PNFMLQGG 258
P+FM+QGG
Sbjct: 112 PSFMIQGG 119
>09_06_0359 + 22508900-22509439
Length = 179
Score = 143 bits (347), Expect = 1e-34
Identities = 66/105 (62%), Positives = 79/105 (75%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GDFT NGTGG+SIYG++F DENF L+HTGPGVLSMANAG
Sbjct: 55 LHYKGSAFHRIIPNFMCQGGDFTRGNGTGGESIYGDRFADENFKLRHTGPGVLSMANAGP 114
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 512
+TNGSQFFI T +T+WLDG+HVVFG VV+G VV+++E GS SG
Sbjct: 115 NTNGSQFFICTTRTTWLDGKHVVFGKVVDGYTVVEKMEQVGSGSG 159
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 7/69 (10%)
Frame = +1
Query: 73 PRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG-------YKGSIFHRV 231
P+VFFD+ + A G++V+EL +D PKT ENFR LCTG+ G G YKGS FHR+
Sbjct: 6 PKVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRI 65
Query: 232 IPNFMLQGG 258
IPNFM QGG
Sbjct: 66 IPNFMCQGG 74
>02_01_0160 + 1116160-1116678
Length = 172
Score = 141 bits (342), Expect = 4e-34
Identities = 67/105 (63%), Positives = 75/105 (71%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P+F GDFT NGTGG+SIYG KF DE F KH PG+LSMANAG
Sbjct: 53 LHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFADEVFKFKHDSPGILSMANAGP 112
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 512
+TNGSQFFI TV SWLDG+HVVFG VVEGM+VVK IE GS+ G
Sbjct: 113 NTNGSQFFICTVPCSWLDGKHVVFGRVVEGMDVVKAIEKVGSRGG 157
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/72 (61%), Positives = 50/72 (69%), Gaps = 7/72 (9%)
Frame = +1
Query: 64 MSLPRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG-------YKGSIF 222
MS RVFFD+TV AP G+IV+EL + P+T ENFRALCTG+ G G YKGS F
Sbjct: 1 MSNTRVFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTF 60
Query: 223 HRVIPNFMLQGG 258
HRVIP FM QGG
Sbjct: 61 HRVIPEFMCQGG 72
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 139 bits (337), Expect = 2e-33
Identities = 67/108 (62%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +3
Query: 207 QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 386
+G F F GDF NGTGGKSIYG F+DENF L HTGPGV+SMANAG +TN
Sbjct: 131 KGSSFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPGVVSMANAGPNTN 190
Query: 387 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG-RPLRE 527
GSQFFI TVKT WLDGRHVVFG V+EGM++VK IE+ + G RP ++
Sbjct: 191 GSQFFICTVKTPWLDGRHVVFGQVIEGMDIVKMIESQETDRGDRPKKK 238
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/64 (56%), Positives = 48/64 (75%), Gaps = 3/64 (4%)
Frame = +1
Query: 76 RVFFDVTVDDAPX---GKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFM 246
+V+FD+++ + G++VI L D P+T ENFRALCTG+ GFGYKGS FHRVI +FM
Sbjct: 84 KVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIKDFM 143
Query: 247 LQGG 258
+QGG
Sbjct: 144 IQGG 147
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 125 bits (302), Expect = 3e-29
Identities = 62/107 (57%), Positives = 72/107 (67%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 377
L +G F P F GD + NGTG SIYG F DENF + H+ PG+LSMAN
Sbjct: 89 LSYKGTPFHRIIPGFMIQGGDTVSGNGTGCDSIYGGMFPDENFKINHSAPGLLSMANYAK 148
Query: 378 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRP 518
DTNGSQFFITTVK + LDG+HVVFG V+ GM+VV +IE GSQSG P
Sbjct: 149 DTNGSQFFITTVKLTRLDGKHVVFGKVLSGMDVVYKIEAEGSQSGTP 195
Score = 81.0 bits (191), Expect = 9e-16
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Frame = +1
Query: 76 RVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG-------YKGSIFHRVI 234
+VFFD+T++ P G+IV+ L + PKT ENFRA+CTG+ G G YKG+ FHR+I
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII 100
Query: 235 PNFMLQGG 258
P FM+QGG
Sbjct: 101 PGFMIQGG 108
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 120 bits (290), Expect = 9e-28
Identities = 58/97 (59%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Frame = +3
Query: 240 FHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 419
F GD T +GTGG+SIYG FEDENF LKH G+LSMANAG DTNGSQFFITT +T
Sbjct: 111 FMVQGGDITAGDGTGGESIYGLNFEDENFVLKHERKGMLSMANAGPDTNGSQFFITTTRT 170
Query: 420 SWLDGRHVVFGNVVEGMEVVKQIETFG-SQSGRPLRE 527
LDG+HVVFG V++GM VV+ +E +S RP+ +
Sbjct: 171 PHLDGKHVVFGRVIKGMGVVRSMEHVSVGESDRPITD 207
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 22/84 (26%)
Frame = +1
Query: 73 PRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG---------------- 204
PR + DV++ G+IV+EL + V P+T ENFRALCTG+ G
Sbjct: 33 PRCYLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAA 92
Query: 205 ------YKGSIFHRVIPNFMLQGG 258
KGS HR++ FM+QGG
Sbjct: 93 SVCTRWTKGSCIHRIVKGFMVQGG 116
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 119 bits (287), Expect = 2e-27
Identities = 59/105 (56%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Frame = +3
Query: 186 WRXXLRL---QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVL 356
W L++ QG F F GD T +GTGG+SIYG KFEDENF LKH G+L
Sbjct: 108 WHFTLKIFHVQGSCFHRVIKGFMVQGGDITAGDGTGGESIYGLKFEDENFVLKHERKGML 167
Query: 357 SMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
SMAN+G +TNGSQFFITT +T LDG+HVVFG V++GM VV+ +E
Sbjct: 168 SMANSGPNTNGSQFFITTTRTPHLDGKHVVFGRVIKGMGVVRSVE 212
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +1
Query: 73 PRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG 204
PR F DV++ G+IVIEL + V P+T ENFRALCTG+ G G
Sbjct: 26 PRCFMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
>10_01_0309 + 3417602-3418147
Length = 181
Score = 114 bits (275), Expect = 6e-26
Identities = 58/112 (51%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Frame = +3
Query: 198 LRLQGLHFPSCHPQFHAARGDFTNHNGTGGKSIY---GNKFEDENFTLKHTGPGVLSMAN 368
L +G F P F GD T NGTGG+S F DE F +KH GPGV+SMAN
Sbjct: 60 LHYKGSAFHRVVPGFMCQGGDITAGNGTGGESALDGAARHFPDEGFAVKHDGPGVVSMAN 119
Query: 369 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRPLR 524
AG +TNGSQFFIT K WLDGRHV FG VV GM V+ I+ G+ SG+ ++
Sbjct: 120 AGPNTNGSQFFITVDKAPWLDGRHVAFGRVVAGMGAVRAIDRTGTWSGKTVK 171
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/71 (50%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Frame = +1
Query: 67 SLPRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXG-------FGYKGSIFH 225
S PRVF D+ + G++VIEL +D P T ENFR LCTG+ YKGS FH
Sbjct: 9 SNPRVFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFH 68
Query: 226 RVIPNFMLQGG 258
RV+P FM QGG
Sbjct: 69 RVVPGFMCQGG 79
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 105 bits (252), Expect = 3e-23
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = +3
Query: 207 QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 386
+G F F GDF N+NGTGG+SIYG F+DENFTLKHTGPGVLSMANAG DTN
Sbjct: 111 KGCSFHRIIKDFMIQGGDFQNNNGTGGRSIYGECFDDENFTLKHTGPGVLSMANAGPDTN 170
Query: 387 GSQFFITTVKTS 422
GSQFFI TVK S
Sbjct: 171 GSQFFICTVKFS 182
Score = 87.8 bits (208), Expect = 7e-18
Identities = 38/61 (62%), Positives = 46/61 (75%)
Frame = +1
Query: 76 RVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQG 255
+ FFDV V P G+IVI L +V PKT +NFRALCTGD G+GYKG FHR+I +FM+QG
Sbjct: 67 KCFFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQG 126
Query: 256 G 258
G
Sbjct: 127 G 127
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 105 bits (251), Expect = 5e-23
Identities = 49/74 (66%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +3
Query: 273 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 449
+GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV T WLD +H VF
Sbjct: 554 DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVF 613
Query: 450 GNVVEGMEVVKQIE 491
G VV+GM+VV+QIE
Sbjct: 614 GRVVKGMDVVQQIE 627
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/68 (41%), Positives = 32/68 (47%)
Frame = +1
Query: 55 TGKMSLPRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVI 234
T SLP D V G I + L + PKT ENF C G+ Y IFHRVI
Sbjct: 489 TATTSLP----DNLVMHTSMGDIHLRLYPEECPKTVENFTTHCRN--GY-YDNLIFHRVI 541
Query: 235 PNFMLQGG 258
FM+Q G
Sbjct: 542 KGFMIQTG 549
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 104 bits (250), Expect = 6e-23
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 431
GD T G GG+SIYG KFEDE LKHTG G+LSMANAG +TNGSQFFIT LD
Sbjct: 63 GDPTG-TGRGGESIYGAKFEDEIRPELKHTGAGILSMANAGPNTNGSQFFITLAPCQSLD 121
Query: 432 GRHVVFGNVVEGMEVVKQIETFGS-QSGRPLRE-SLSKTVVR 551
G+H +FG V +GME+VK++ + + +S RP+ E + +TVV+
Sbjct: 122 GKHTIFGRVSKGMEIVKRLGSVQTDKSDRPIHEVKILRTVVK 163
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = +1
Query: 88 DVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQGGTSP 267
+VT++ + G IE+ PKTC NF L G+ Y IFHR+I +F++QGG P
Sbjct: 11 EVTLETS-MGAFTIEMYYKHAPKTCRNFLELSR--RGY-YDNVIFHRIIKDFIVQGG-DP 65
Query: 268 TITALGESPSTAISLKTRISP 330
T T G + I P
Sbjct: 66 TGTGRGGESIYGAKFEDEIRP 86
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 103 bits (247), Expect = 1e-22
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +3
Query: 240 FHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 419
F A GDF+N +G+GG+SIYG FEDENF L+H G+LSMANAG +TNGSQFFIT
Sbjct: 71 FMAQGGDFSNGDGSGGESIYGGTFEDENFVLRHDERGLLSMANAGPNTNGSQFFITFKHN 130
Query: 420 SWLDGRHVVFGNVVEGMEVVKQIE 491
S LD + VFG ++ G +V+K+IE
Sbjct: 131 SRLDRKSTVFGKLILGNDVLKRIE 154
Score = 80.6 bits (190), Expect = 1e-15
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 8/74 (10%)
Frame = +1
Query: 61 KMSLPRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG--------YKGS 216
K P VF DV++ D P ++V EL +DV P+T ENFRALCTG+ G G YKGS
Sbjct: 3 KKKNPIVFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGS 62
Query: 217 IFHRVIPNFMLQGG 258
+FHRVI FM QGG
Sbjct: 63 LFHRVIKGFMAQGG 76
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 83.8 bits (198), Expect = 1e-16
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 431
GD T G GG SI+G KF DE +LKH GV+SMAN+G +TNGSQFFIT K L+
Sbjct: 54 GDPTG-TGKGGTSIWGKKFADEFRESLKHNARGVMSMANSGPNTNGSQFFITYAKQPHLN 112
Query: 432 GRHVVFGNVVEGMEVVKQIETFGSQSG-RPLRE 527
G + VF V+ G EV+ +E + G RPL E
Sbjct: 113 GHYTVFAKVIHGFEVLDLMEKAQTGPGDRPLAE 145
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/57 (50%), Positives = 34/57 (59%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G I E+ D P+T ENF ALC G+ Y G+IFHR I FM+QGG PT T G
Sbjct: 10 GDIKCEVFCDQAPRTAENFLALCAS--GY-YDGTIFHRNIKGFMIQGG-DPTGTGKG 62
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/60 (58%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = +3
Query: 351 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGRPLRE 527
V++MAN+G D+NGSQF+ITT+KTSWLDG HVVFG V++GM+ V IE G+ +G+P ++
Sbjct: 117 VIAMANSGPDSNGSQFYITTIKTSWLDGEHVVFGRVIQGMDYVYAIEGGAGTYNGKPRKK 176
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 11/78 (14%)
Frame = +1
Query: 58 GKMSLP----RVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG------- 204
G++ LP RV+ DV +D G+IVI L DV PKT NFRALCTG+ G G
Sbjct: 29 GEVRLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLH 88
Query: 205 YKGSIFHRVIPNFMLQGG 258
YKGS FHR+IP FM+QGG
Sbjct: 89 YKGSRFHRIIPGFMIQGG 106
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 78.6 bits (185), Expect = 5e-15
Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +3
Query: 210 GLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 386
GL F F GD T G+GG+SI+G F+DE N L H+G GV+SMAN+G TN
Sbjct: 383 GLIFHRSIKNFMIQGGDPTG-TGSGGESIWGKPFKDELNSKLIHSGRGVVSMANSGPHTN 441
Query: 387 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG-SQSGRPLRE 527
GSQFFI L+ +H VFG VV G+ + +E RPL E
Sbjct: 442 GSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPVDDDDRPLEE 489
Score = 58.4 bits (135), Expect = 5e-09
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G + +EL D+TP+TCENF C + G+ Y G IFHR I NFM+QGG PT T G
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGG-DPTGTGSG 406
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 77.8 bits (183), Expect = 8e-15
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Frame = +1
Query: 73 PRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGD---XGF--GYKGSIFHRVIP 237
P VFFDVT+ P G+I +EL +D+ PKT ENFR CTG+ G GYKG FHRVI
Sbjct: 37 PVVFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIK 96
Query: 238 NFMLQGG 258
+FM+QGG
Sbjct: 97 DFMIQGG 103
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/55 (49%), Positives = 33/55 (60%)
Frame = +3
Query: 207 QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 371
+G F F GD+ +GTG SIYG KF+DENF KHTGPG+LSM +
Sbjct: 87 KGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTKFDDENFIAKHTGPGLLSMVRS 141
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +3
Query: 393 QFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIETFGS-QSGRP 518
QFFIT K WLD +HVVFG V+ +GM V++IE + + RP
Sbjct: 200 QFFITCAKCEWLDNKHVVFGRVLGDGMLAVRKIENVATGPNNRP 243
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 67.7 bits (158), Expect = 9e-12
Identities = 48/134 (35%), Positives = 70/134 (52%), Gaps = 16/134 (11%)
Frame = +3
Query: 174 CPVHWRXXLRL------QGLHFPSCHPQFHAARGDFTNHNGTGGKSIY----GNK---FE 314
CP+ + L+L G F F A GD T G GG S+Y G++ F+
Sbjct: 21 CPLTTKNFLKLCKMKYYNGCLFHKVEKDFLAQTGDPTG-TGAGGDSVYKFLYGDQARFFD 79
Query: 315 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 488
DE L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + + +I
Sbjct: 80 DEIRPDLRHSKKGTIAMASAGENCNASQFYITLRDDVDYLDDKHTVFGMVAEGFDTLTKI 139
Query: 489 -ETFGSQSGRPLRE 527
ET+ GRP ++
Sbjct: 140 SETYVDDKGRPFKD 153
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/57 (38%), Positives = 31/57 (54%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G I ++L +D+ P T +NF LC Y G +FH+V +F+ Q G PT T G
Sbjct: 10 GDIEVDLHTDMCPLTTKNFLKLCKMKY---YNGCLFHKVEKDFLAQTG-DPTGTGAG 62
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Frame = +1
Query: 73 PRVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFG--------YKGSIFHR 228
P VFFD+ + +I EL +DV PKT ENFRALCTG+ G G +KG+ HR
Sbjct: 8 PHVFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHR 67
Query: 229 VIPNFMLQG-GTSPT 270
++ FM Q SPT
Sbjct: 68 ILKGFMAQNTSLSPT 82
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 411 VKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGRPLRE 527
V TS + +HVVFG VV GM ++K++E GS +G+P E
Sbjct: 87 VSTSCVS-KHVVFGKVVTGMPLLKKLEAVGSDTGKPTCE 124
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 62.5 bits (145), Expect = 3e-10
Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 GDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD-TNGSQFFITTVKTSWL 428
GD T +GTGG+SIYG F DE T L+ G+++ ANAG +NGSQFFI+ + WL
Sbjct: 66 GDPTG-SGTGGESIYGAPFADEFHTRLRFNHRGLVACANAGTPHSNGSQFFISLDRCDWL 124
Query: 429 DGRHVVFGNV 458
D ++ +FG V
Sbjct: 125 DKKNTIFGKV 134
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQGGTSPTITALG 285
G + IEL PK NF LC G+ Y G++FHRVI +F++QGG PT + G
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGG-DPTGSGTG 74
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 60.5 bits (140), Expect = 1e-09
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Frame = +3
Query: 309 FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK-TSWLDGRHVVFGNVVEGMEVVK 482
F+DE + L+H+ G ++MA+AG + N SQF+IT +LD +H VFG V EG + +
Sbjct: 108 FDDEIHPELRHSKMGTIAMASAGENCNASQFYITLRDGVDYLDDKHTVFGMVAEGFDTIT 167
Query: 483 QI-ETFGSQSGRPLRE 527
+I ET+ GRP ++
Sbjct: 168 KINETYVDDKGRPFKD 183
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHR 228
G I ++L +D+ P T +NF LC G+ G G F +
Sbjct: 10 GDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRK 47
>02_01_0086 + 613113-613532
Length = 139
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = +3
Query: 315 DENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
+ENF L H P + N A+ N SQFF + W DG +VVFG ++ G +K IE
Sbjct: 63 NENFLLPHDRPW---LPNGSAENNISQFF---TRVPWFDGNYVVFGCIISGFHNLKAIE 115
Score = 31.1 bits (67), Expect = 0.91
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 127 IELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQG 255
+EL +D+ P T ENFRAL T YKG + P ++G
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEG 42
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 76 RVFFDVTVDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQG 255
+ F DV++ P G+I I L D P F +L T G GY+ F +++P ++ G
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYVQHG 132
Query: 256 G--TSPTITALGE 288
G + P I A+ E
Sbjct: 133 GVVSYPAIPAVTE 145
Score = 34.7 bits (76), Expect = 0.074
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 372 GADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 488
G NG++F ITT LD +V G VV+GM+V+ +I
Sbjct: 202 GVVPNGTEFVITTGDAPELDASALVVGRVVDGMDVLGKI 240
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +3
Query: 207 QGLHFPSCHPQFHAARGDFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADT 383
+G+ F F GDF + NG + I K EN + KH + + N +
Sbjct: 131 KGMPFRHVIKNFVIQGGDF-DFNGAAQEWILKAKASGENALSPKHEAFMIGTTKNP--NN 187
Query: 384 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
G FITT L+ + VVFG V+ G ++V++IE
Sbjct: 188 KGFDLFITTAPIPDLNDKLVVFGQVINGQDIVQEIE 223
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 97 VDDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIPNFMLQGG 258
V D G I IE+ D + + F +LC + +KG F VI NF++QGG
Sbjct: 97 VIDTAKGSITIEIYKDASADVVDRFVSLCKSNH---FKGMPFRHVIKNFVIQGG 147
>10_01_0310 + 3425099-3425218
Length = 39
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 115 GKIVIELRSDVTPKTCENFRALCTGDXGFG 204
G +VIE +D PKT ENFR +CTG G
Sbjct: 8 GSVVIEQFADKVPKTTENFRPMCTGGCDMG 37
>11_06_0322 +
22358505-22358642,22358690-22358791,22359444-22359557,
22359643-22359791,22360155-22360227,22360308-22360397,
22360752-22360791,22361579-22361661,22362614-22362775
Length = 316
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 327 TLKHTGPGVLSMA-NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 491
T+KH G+LSM ++ ++ GS F I LDG++ VFG + +G + ++++E
Sbjct: 156 TVKHVR-GILSMGRHSDPNSGGSSFSILLGDAPHLDGQYAVFGRLTKGDDTLRKLE 210
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 100 DDAPXGKIVIELRSDVTPKTCENFRALCTGDXGFGYKGSIFHRVIP-NFMLQGGTSP 267
D P G+++ L + P T NF+A CT Y+G++ H+++ F + G P
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACT---SAAYRGTLVHKLLQGQFFVAGRQGP 176
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 12/60 (20%)
Frame = +3
Query: 324 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVKTSW--LDGRHVVFGNVVEG 467
F LKH PG LS+ D + +F +TT LDG+++VFG V+EG
Sbjct: 201 FELKHARPGTLSLCLGQNDDDDDIKLNPNYHNVEFLVTTGPGPCPELDGQNIVFGTVLEG 260
>03_02_0894 + 12226006-12226484,12226601-12226709
Length = 195
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Frame = -3
Query: 425 PGGLDSGDEELGTISISTGISHG-EDARSSVLKGEILVFKLIAVDGLSPSAVMVGEVPPC 249
P LD E T++ S G + G G + + S +AVM+ P C
Sbjct: 77 PSPLDGDSEIHKTVTTSCGWAEGLRRPPLGYCGGRVEATATFSSSYSSSTAVMLPTQPKC 136
Query: 248 SMKLGMTRWKMEPL*PKPXSPVHRARKFSHVLGVTSLLSSITI 120
S + MT PL + RA + + V + L+S+I I
Sbjct: 137 STTMRMTPGHPPPLANEVGGVERRATRMADVAPMAHLVSAIFI 179
>07_03_1767 +
29338867-29338912,29339261-29339325,29339571-29339642,
29339913-29339956,29340047-29340158,29340879-29340950,
29341449-29341511,29341957-29342034,29342110-29342202,
29342294-29342413,29342762-29342845,29343094-29343309,
29343401-29343448,29343761-29343871,29344170-29344267,
29345004-29345248,29345764-29345832,29345919-29345983,
29346168-29346337,29346434-29346512,29346614-29346869,
29347416-29347461,29347602-29347710,29347820-29347882,
29350075-29350107,29350924-29351442
Length = 991
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -3
Query: 353 DARSSVLKGEILVFKLIAVDGLSPSAVMVGEV 258
DA +V GEIL+ ++ V G++PS V++ ++
Sbjct: 778 DAFVNVQNGEILLIEVNTVPGMTPSTVLIHQI 809
>12_02_1032 +
25542420-25542573,25543511-25543577,25543816-25543918,
25544435-25544505,25544639-25544702,25545260-25545316,
25545435-25545593,25545967-25546035,25546111-25546202,
25546579-25546657,25546923-25547088,25547480-25547604,
25547737-25548078,25548271-25548432,25548520-25548624,
25548766-25548860,25548948-25549044,25549848-25550165,
25550228-25550296
Length = 797
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 212 PL*PKPXSPVHRARKFSHVLGVTSLLSSITIFPXGASSTVTSKNTRGRDILP 57
PL P SP+ R+ H + + + +++ P +SSTVTS G D P
Sbjct: 722 PLLLSPRSPMSELRRPLH-MPFSPVRKAVSPSPSSSSSTVTSPRNAGEDQKP 772
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -1
Query: 484 CLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAM 359
C T ++P +T PK+ L +S L V M+N + S ALA+
Sbjct: 2901 CFTAALPLSTIPKS--LNNSHFALEVTMRNGKKHASLRALAI 2940
>03_01_0014 +
113638-113754,113836-113950,114570-114835,115365-115575,
115915-115979,118723-118930,119457-119566,119663-119913,
120250-120356,120442-120509,120624-120701,121070-121198,
121341-121481,122297-122344,122648-122743,124071-124183,
124441-124591,124745-124818,124913-125072,125356-125454,
125532-125618,125761-125907
Length = 946
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -3
Query: 386 ISISTGISHGEDARSSVLKGEILVF 312
++I T I HG D R+S L GE LVF
Sbjct: 119 LAILTAIFHGVDPRTSFLIGEGLVF 143
>01_03_0106 - 12607995-12608327,12608863-12609063
Length = 177
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 528 ILLEVFPTGCQRSQSA*QLPCLQQHSQRQHVC 433
IL VFP+ C +S LP QH Q+VC
Sbjct: 30 ILSTVFPSPCLNVRSPCLLPIATQHDIDQYVC 61
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +3
Query: 15 CHCGGFVNCLHC*YRQNVSTT 77
CHCG V+ C Y N++ T
Sbjct: 613 CHCGAMVHAFECMYYNNLNAT 633
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,710,913
Number of Sequences: 37544
Number of extensions: 470203
Number of successful extensions: 1269
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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