Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00829
         (715 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    24   4.1  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   4.1  
Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.        23   7.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.5  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   9.5  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 152 PRRVKTSVPCALATXASVTRAPFSIVSSPISCCKGG 259
           P ++K S+P       S T  P+S    P   C GG
Sbjct: 307 PIKLKLSLPYVEREKCSKTFRPWSFALGPGQMCAGG 342


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 386 WFPVLHHHCQD 418
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>Y09953-1|CAA71084.1|   91|Anopheles gambiae histone H4 protein.
          Length = 91

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 187 GDXGFGYKGSIFHRVIPNFMLQGGTSPTITAL 282
           G  G G  G+  HR +    +QG T P I  L
Sbjct: 7   GGKGLGKGGARRHRKVLRDNIQGTTKPAIRRL 38


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 106 HRQQ*RRRILVVETFCRY*QCKQFTK 29
           H QQ   +  ++  FCR  +CK+  K
Sbjct: 427 HHQQVHNQQRILYCFCRNVECKELEK 452


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +1

Query: 259 TSPTITALGESPSTAISLKTRISPLSTLDLASSPW 363
           T+PT TA G + +  +S        ++L L  SP+
Sbjct: 524 TAPTATAAGTAKARKVSAGVATIQKASLSLPGSPF 558


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 481 LTTSMPSTTFPKTTCLPSSQEVLTV 407
           L+ ++  T F +  CLP+S+E  TV
Sbjct: 226 LSETVEFTDFIRPICLPTSEESRTV 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,397
Number of Sequences: 2352
Number of extensions: 17696
Number of successful extensions: 41
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)