Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00828
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    24   5.4  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.2  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   7.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.5  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 586 SKGTCILLHGNVVHKSSHNKSDKSRHAYTFH 678
           S  TC  LHG+  H  +H      RH +  H
Sbjct: 409 SLNTC-RLHGSPTHLHNHRSGGGGRHHHHHH 438


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 137 RGSHRRRWKSYSRTGDFIKQGRSRTASSTS 226
           R  +RR  K Y   G   K G SR + S+S
Sbjct: 609 RDDYRRTEKDYRGNGKHDKYGSSRHSDSSS 638


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 549  GLSTI*LYTHTGFERNVYTITRQR 620
            G S +  Y   G ERN +T+T  R
Sbjct: 1267 GTSVVLYYYKMGTERNCFTVTAYR 1290


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 137  RGSHRRRWKSYSRTGDFIKQGRSRTASST 223
            RGS R R +S SR+G    + RSR+ S +
Sbjct: 1158 RGSRRSRSRSRSRSG---SRSRSRSGSGS 1183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,371
Number of Sequences: 2352
Number of extensions: 16967
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)