Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00828
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein. 88 3e-17
AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygena... 88 3e-17
AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 82 2e-15
BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygena... 81 3e-15
AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygena... 78 3e-14
BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein. 74 6e-13
AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygena... 74 6e-13
AK126701-1|BAC86649.1| 173|Homo sapiens protein ( Homo sapiens ... 31 3.1
>BC053853-1|AAH53853.1| 291|Homo sapiens PHYHD1 protein protein.
Length = 291
Score = 88.2 bits (209), Expect = 3e-17
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 VKSICKELGFIEPAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATV 433
V+++ + LG P VVQSMYIFK P G EV HQDA++LYTEP V G WIA+E+AT+
Sbjct: 123 VQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATL 182
Query: 434 QNGCLWLXXXXXXXXXXXXLIRNP 505
+NGCLW ++R P
Sbjct: 183 ENGCLWFIPGSHTSGVSRRMVRAP 206
Score = 78.2 bits (184), Expect = 3e-14
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYSEA*RAFAKSLAL 287
P+F+ T+S + A+SL L
Sbjct: 110 HDPVFKSITHSFKVQTLARSLGL 132
Score = 66.5 bits (155), Expect = 9e-11
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 562 SSFTPIPVSKGTCILLHGNVVHKSSHNKSDKSRHAYTFHVVETYNNLYSTEN 717
S F P PV +G +L+HG VVHKS N SD+SR AYTFH++E +S EN
Sbjct: 225 SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN 276
>AL672142-6|CAI10842.1| 291|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 291
Score = 88.2 bits (209), Expect = 3e-17
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 VKSICKELGFIEPAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATV 433
V+++ + LG P VVQSMYIFK P G EV HQDA++LYTEP V G WIA+E+AT+
Sbjct: 123 VQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATL 182
Query: 434 QNGCLWLXXXXXXXXXXXXLIRNP 505
+NGCLW ++R P
Sbjct: 183 ENGCLWFIPGSHTSGVSRRMVRAP 206
Score = 78.2 bits (184), Expect = 3e-14
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYSEA*RAFAKSLAL 287
P+F+ T+S + A+SL L
Sbjct: 110 HDPVFKSITHSFKVQTLARSLGL 132
Score = 66.5 bits (155), Expect = 9e-11
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 562 SSFTPIPVSKGTCILLHGNVVHKSSHNKSDKSRHAYTFHVVETYNNLYSTEN 717
S F P PV +G +L+HG VVHKS N SD+SR AYTFH++E +S EN
Sbjct: 225 SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN 276
>AL672142-7|CAI10843.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 81.8 bits (193), Expect = 2e-15
Identities = 55/151 (36%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYSEA*RAFAKSLALLSRLWCKACIFLRTLALVPKWLHIKTQHICTQNQLPQ 398
P+F+ T+S + A+SL L + + ++++ + L I+T CT++
Sbjct: 110 HDPVFKSITHSFKVQTLARSLGL------QMPVVVQSMYIFKSPL-IRTPPSCTRSPWAG 162
Query: 399 L-ASG*LLKKPQFKTAVCGCLEALTGQECTD 488
A G + P+++TAV G A T C +
Sbjct: 163 CWACGSQWRMPRWRTAVSGSSLAPTPVVCQE 193
>BC009373-1|AAH09373.1| 297|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 297
Score = 81.4 bits (192), Expect = 3e-15
Identities = 55/149 (36%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYSEA*RAFAKSLALLSRLWCKACIFLRTLALVPKWLHIKTQHICTQNQLPQ 398
P+F+ T+S + A+SL L + + ++++ + L I+T CT++
Sbjct: 110 HDPVFKSITHSFKVQTLARSLGL------QMPVVVQSMYIFKSPL-IRTPPSCTRSPWAG 162
Query: 399 L-ASG*LLKKPQFKTAVCGCLEALTGQEC 482
A G + P+++TAV G A T C
Sbjct: 163 CWACGSQWRMPRWRTAVSGSSLAPTPVVC 191
>AL672142-4|CAI10840.1| 177|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 177
Score = 78.2 bits (184), Expect = 3e-14
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYSEA*RAFAKSLAL 287
P+F+ T+S + A+SL L
Sbjct: 110 HDPVFKSITHSFKVQTLARSLGL 132
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 VKSICKELGFIEPAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIAL 418
V+++ + LG P VVQSMYIFK P G EV HQDA++LYTEP V G WIA+
Sbjct: 123 VQTLARSLGLQMPVVVQSMYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAV 177
>BC051300-1|AAH51300.1| 270|Homo sapiens PHYHD1 protein protein.
Length = 270
Score = 73.7 bits (173), Expect = 6e-13
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYS 251
P+F+ T+S
Sbjct: 110 HDPVFKSITHS 120
Score = 66.5 bits (155), Expect = 9e-11
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 562 SSFTPIPVSKGTCILLHGNVVHKSSHNKSDKSRHAYTFHVVETYNNLYSTEN 717
S F P PV +G +L+HG VVHKS N SD+SR AYTFH++E +S EN
Sbjct: 204 SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN 255
Score = 63.3 bits (147), Expect = 8e-10
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 SVKSICKELGFIEPAVVQSMYIFK--NPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEE 424
S+ I L +P + FK P G EV HQDA++LYTEP V G WIA+E+
Sbjct: 99 SINKIGHALHAHDPVFKSITHSFKVQQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVED 158
Query: 425 ATVQNGCLWLXXXXXXXXXXXXLIRNP 505
AT++NGCLW ++R P
Sbjct: 159 ATLENGCLWFIPGSHTSGVSRRMVRAP 185
>AL672142-5|CAI10841.1| 255|Homo sapiens phytanoyl-CoA dioxygenase
domain containing 1 protein.
Length = 255
Score = 73.7 bits (173), Expect = 6e-13
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Frame = +3
Query: 51 RATFSTTEKTHLKDK----YFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHL 218
R FST E+ L+ + YFL S DKIR FFE+G D GN V PE S+NK+GHALH
Sbjct: 50 RTEFSTQEEEQLRAQGSTDYFLSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHA 109
Query: 219 LHPIFRCYTYS 251
P+F+ T+S
Sbjct: 110 HDPVFKSITHS 120
Score = 66.5 bits (155), Expect = 9e-11
Identities = 28/52 (53%), Positives = 35/52 (67%)
Frame = +1
Query: 562 SSFTPIPVSKGTCILLHGNVVHKSSHNKSDKSRHAYTFHVVETYNNLYSTEN 717
S F P PV +G +L+HG VVHKS N SD+SR AYTFH++E +S EN
Sbjct: 204 SLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPEN 255
Score = 63.3 bits (147), Expect = 8e-10
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 SVKSICKELGFIEPAVVQSMYIFK--NPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEE 424
S+ I L +P + FK P G EV HQDA++LYTEP V G WIA+E+
Sbjct: 99 SINKIGHALHAHDPVFKSITHSFKVQQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVED 158
Query: 425 ATVQNGCLWLXXXXXXXXXXXXLIRNP 505
AT++NGCLW ++R P
Sbjct: 159 ATLENGCLWFIPGSHTSGVSRRMVRAP 185
>AK126701-1|BAC86649.1| 173|Homo sapiens protein ( Homo sapiens
cDNA FLJ44747 fis, clone BRACE3028998, moderately
similar to D-beta-hydroxybutyrate dehydrogenase
precursor (EC 1.1.1.30). ).
Length = 173
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +2
Query: 602 YYYTATLYIRAPTTNLIRVATPTLSTWWRHTTICTRP 712
+Y ATL R P T L + A + S WR T C+RP
Sbjct: 56 FYQPATLVERGPLTQLYQQAV-SRSRGWRDTQCCSRP 91
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,673,904
Number of Sequences: 237096
Number of extensions: 2407480
Number of successful extensions: 5808
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5801
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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