Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00828
(718 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical ... 80 2e-15
AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical ... 31 0.62
Z36719-5|CAA85313.2| 351|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 30 1.9
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical pr... 29 3.3
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 29 4.4
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 29 4.4
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 29 4.4
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical p... 28 5.8
AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB serin... 28 5.8
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 28 7.7
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical
protein Y105C5B.9 protein.
Length = 288
Score = 79.8 bits (188), Expect = 2e-15
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 RATFST-TEKTHLKDKYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHP 227
++ FST E H D YFL S+DKIR FFEEGA+D DG LTV + +LNK+GH LH L P
Sbjct: 46 KSVFSTYDEDKHAADSYFLNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDP 105
Query: 228 IFRCYTYS 251
F T++
Sbjct: 106 TFEKMTFN 113
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/65 (53%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +2
Query: 257 VKSICKELGFIEPAVVQSMYIFKNPGIGSEVVAHQDATYLYTEPTPPV-GFWIALEEATV 433
+++I KE+G+ EP VVQSMYIFK P IG V H D+T+L +P + G WIA++EA+V
Sbjct: 116 IQNIFKEIGYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDPIDHLTGVWIAIDEASV 175
Query: 434 QNGCL 448
+NGCL
Sbjct: 176 ENGCL 180
Score = 72.9 bits (171), Expect = 2e-13
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = +1
Query: 553 YPQSSFTPIPVSKGTCILLHGNVVHKSSHNKSDKSRHAYTFHVVETYNNLYSTEN 717
Y QS F +P+SKG+ IL+HG VVHKS N S+KSRHAYT HV+E N +S +N
Sbjct: 218 YDQSKFQHVPISKGSLILIHGLVVHKSEANTSEKSRHAYTIHVMERKNTKWSEQN 272
>AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical
protein F37C4.8 protein.
Length = 324
Score = 31.5 bits (68), Expect = 0.62
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -1
Query: 397 WGSWFCVQICCV--LMCNHFGTNARVLKNIHALHHSR 293
W +W C CC +C F T+ K + ++ H R
Sbjct: 53 WSNWSCCSACCCPKAVCKQFETSGDKCKTVKSIQHRR 89
>Z36719-5|CAA85313.2| 351|Caenorhabditis elegans Hypothetical
protein C06C3.6 protein.
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 202 VTHCIFYIRFSDVTRIVKREEHLQRAWLY 288
++HCI+YI D R K LQ+ +LY
Sbjct: 236 ISHCIWYIYSEDAVRYSKSTRKLQKMFLY 264
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +2
Query: 302 VQSMYIFKNPGIG---SEVVAHQDATYLYTEPTP-PVGFWIALEEATVQNGCL 448
+ +M I K P G S HQD Y P V W A+E+ QNGCL
Sbjct: 137 MHTMLINKPPDTGALTSRHPMHQDLIYFPWRPEELTVCAWTAMEKINKQNGCL 189
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +3
Query: 186 SLNKVGHALHLLHPIF-RCYTYSEA*RAFAKSLAL-LSRLWCKACIFLRTLALVPKWLHI 359
SLNK+ LH HP F RC +E ++ AL L++L C L + + K
Sbjct: 659 SLNKLMTMLHKTHPHFIRCIIPNEKKQSGMIDAALVLNQLTCNG--VLEGIRICRKGFPN 716
Query: 360 KTQHICTQNQLPQLASG*LLKKPQFKTAVCGCLEALTGQE 479
+TQH + LA+ KT L+AL Q+
Sbjct: 717 RTQHPDFVQRYAILAAKEAKSSDDMKTCAGAILQALINQK 756
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 29.9 bits (64), Expect = 1.9
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +3
Query: 186 SLNKVGHALHLLHPIF-RCYTYSEA*RAFAKSLAL-LSRLWCKACIFLRTLALVPKWLHI 359
SLNK+ LH HP F RC +E ++ AL L++L C L + + K
Sbjct: 659 SLNKLMTMLHKTHPHFIRCIIPNEKKQSGMIDAALVLNQLTCNG--VLEGIRICRKGFPN 716
Query: 360 KTQHICTQNQLPQLASG*LLKKPQFKTAVCGCLEALTGQE 479
+TQH + LA+ KT L+AL Q+
Sbjct: 717 RTQHPDFVQRYAILAAKEAKSSDDMKTCAGAILQALINQK 756
>Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical
protein T26E3.4 protein.
Length = 240
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 12 GLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEE 140
G+EFTEN PD T + E ++ ES DK+R EE
Sbjct: 57 GIEFTENYPDEIPIITLNGIEDAFTAER-IAESIDKLRSVAEE 98
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 28.7 bits (61), Expect = 4.4
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = +3
Query: 186 SLNKVGHALHLLHPIF-RCYTYSEA*RAFAKSLAL-LSRLWCKACIFLRTLALVPKWLHI 359
SLNK+ LH HP F RC E ++ AL L++L C L + + K
Sbjct: 659 SLNKLMTMLHKTHPHFIRCIIPIEKKQSGMIDAALVLNQLTCNG--VLEGIRICRKGFPN 716
Query: 360 KTQHICTQNQLPQLASG*LLKKPQFKTAVCGCLEALTGQE 479
+TQH + LA+ KT L+AL Q+
Sbjct: 717 RTQHPDFVQRYAILAAKEAKSSDDMKTCAGAILQALINQK 756
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 312 CIFLRTLALVPKWLHIKTQH-ICTQNQLPQ 398
CI RT AL+ K+L +K +H IC +N Q
Sbjct: 440 CIIRRTSALLTKYLPVKYEHIICCKNSTLQ 469
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 312 CIFLRTLALVPKWLHIKTQH-ICTQNQLPQ 398
CI RT AL+ K+L +K +H IC +N Q
Sbjct: 440 CIIRRTSALLTKYLPVKYEHIICCKNSTLQ 469
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 426 PQFKTAVCGCLEALTGQECTDV 491
P+FK C CL LTG C+++
Sbjct: 478 PKFKGYDCTCLTGLTGANCSEI 499
>Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical
protein C12D8.10b protein.
Length = 546
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 93 KYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVG 203
KY ++ND++ CF E AI D + E+ +NK G
Sbjct: 257 KYSFQTNDRL-CFVMEFAIGGDLYYHLNREVQMNKEG 292
>AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 546
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 93 KYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVG 203
KY ++ND++ CF E AI D + E+ +NK G
Sbjct: 257 KYSFQTNDRL-CFVMEFAIGGDLYYHLNREVQMNKEG 292
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 423 KPQFKTAVCGCLEALTGQECTDV 491
KP+FK C C+ LTG C+ +
Sbjct: 431 KPKFKGYDCTCITGLTGVNCSTI 453
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 186 SLNKVGHALHLLHPIF-RCYTYSEA*RA-FAKSLALLSRLWCKACI 317
SLNK+ H LH HP F RC +E +A + +L++L C +
Sbjct: 662 SLNKLMHMLHQTHPHFIRCIIPNELKKAGMIDANLVLNQLTCNGVL 707
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,604,976
Number of Sequences: 27780
Number of extensions: 383829
Number of successful extensions: 1087
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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