Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00826
         (452 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    28   0.13 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.54 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   0.94 
AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450 CY...    25   1.2  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    25   1.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   5.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   8.8  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.3 bits (60), Expect = 0.13
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +2

Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQEAE 451
           E N I+K KEEAD+ LKE  ++KE  ++  +       E+ + EAE
Sbjct: 258 ELNIIEKRKEEADEVLKE--KKKEVGKMTREMAKKE-QEIREVEAE 300



 Score = 24.6 bits (51), Expect = 1.6
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 263 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 391
           +Q+ K       +K  +EA+ + KEK++   ++     +KEQE
Sbjct: 251 DQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQE 293



 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 314 EANRIKKEKEEADKRLKEIQQRKEQ 388
           EA R+K+++    + L  I++RKE+
Sbjct: 244 EAKRLKEDQISKQQELNIIEKRKEE 268


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 0.54
 Identities = 9/28 (32%), Positives = 20/28 (71%)
 Frame = +2

Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQER 394
           ++  R ++EKE+ +K  +E ++R+ Q+R
Sbjct: 476 EQREREQREKEQREKEQREKEERERQQR 503



 Score = 26.2 bits (55), Expect = 0.54
 Identities = 9/28 (32%), Positives = 21/28 (75%)
 Frame = +2

Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQER 394
           ++  + ++EKE+ +K  +E QQR++++R
Sbjct: 481 EQREKEQREKEQREKEERERQQREKEQR 508



 Score = 25.4 bits (53), Expect = 0.94
 Identities = 9/24 (37%), Positives = 19/24 (79%)
 Frame = +2

Query: 323 RIKKEKEEADKRLKEIQQRKEQER 394
           R ++E+E+ +K  +E +QR+++ER
Sbjct: 475 REQREREQREKEQREKEQREKEER 498



 Score = 25.4 bits (53), Expect = 0.94
 Identities = 8/28 (28%), Positives = 21/28 (75%)
 Frame = +2

Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQER 394
           ++  + ++EKEE +++ +E +QR+ ++R
Sbjct: 486 EQREKEQREKEERERQQREKEQREREQR 513



 Score = 23.0 bits (47), Expect = 5.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERL 397
           E    ++E+E A +R +E ++ +E+ER+
Sbjct: 511 EQREKEREREAARERERERERERERERM 538


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 329 KKEKEEADKRLKEIQQRKE 385
           K  KEE D+ L+E +QRKE
Sbjct: 470 KNPKEEIDEELEEQRQRKE 488


>AY062199-1|AAL58560.1|  151|Anopheles gambiae cytochrome P450
           CYP4H19 protein.
          Length = 151

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +3

Query: 81  VPVTYRLNTKVNMANDPERFDSMLLAMAQQHEGGVKDLL 197
           +P+ Y ++    +  DPERFD    + A QH  G  D +
Sbjct: 102 IPI-YVIHRNPAVFPDPERFDPERFSGANQHPPGPYDYI 139


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 81  VPVTYRLNTKVNMANDPERFDSMLLAMAQQH 173
           +P+ Y ++   ++  DPERFD    A+A  H
Sbjct: 404 IPI-YAIHHDASIYPDPERFDPDRFALAATH 433


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 287  YTHA-KKACDEANRIKKEKEEADKRLKEIQQRKEQ 388
            Y H  KKA D+     ++KE+  KR  E+   K++
Sbjct: 978  YNHVNKKALDQFLSFSEQKEKLYKRKAELDVGKDK 1012


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/31 (29%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
 Frame = +2

Query: 314 EANRIKKEKEEADKRLKEIQQR----KEQER 394
           E ++I+ ++ + +  +KE+Q+R    +EQ+R
Sbjct: 627 ECDKIRNQRGQIENSIKELQERCAELREQKR 657


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,446
Number of Sequences: 2352
Number of extensions: 5564
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)