Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00826
(452 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.090
At1g24560.1 68414.m03090 expressed protein 32 0.16
At2g22610.1 68415.m02680 kinesin motor protein-related 31 0.36
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 31 0.36
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 31 0.48
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 31 0.48
At5g13340.1 68418.m01535 expressed protein 30 0.64
At4g26760.1 68417.m03855 microtubule associated protein (MAP65/A... 30 0.84
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 29 1.1
At4g02940.1 68417.m00401 oxidoreductase, 2OG-Fe(II) oxygenase fa... 29 1.5
At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1... 29 1.5
At4g32190.1 68417.m04581 centromeric protein-related low similar... 29 1.9
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.9
At5g55820.1 68418.m06956 expressed protein 28 2.6
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 28 2.6
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 28 2.6
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 28 3.4
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 28 3.4
At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5) iden... 28 3.4
At3g05110.1 68416.m00555 hypothetical protein 28 3.4
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 28 3.4
At1g16520.1 68414.m01977 expressed protein 28 3.4
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 28 3.4
At3g62940.2 68416.m07071 OTU-like cysteine protease family prote... 27 4.5
At3g62940.1 68416.m07070 OTU-like cysteine protease family prote... 27 4.5
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 27 4.5
At2g38823.1 68415.m04770 expressed protein 27 4.5
At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKL... 27 4.5
At5g43310.1 68418.m05293 COP1-interacting protein-related contai... 27 5.9
At5g26350.1 68418.m03150 hypothetical protein 27 5.9
At4g40020.1 68417.m05666 hypothetical protein 27 5.9
At4g25950.1 68417.m03733 vacuolar ATP synthase, putative / V-ATP... 27 5.9
At4g23800.1 68417.m03422 high mobility group (HMG1/2) family pro... 27 5.9
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 27 5.9
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 27 5.9
At1g14840.1 68414.m01775 expressed protein 27 5.9
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 7.8
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 27 7.8
At3g14670.1 68416.m01856 hypothetical protein 27 7.8
At2g01750.1 68415.m00104 expressed protein 27 7.8
At1g68060.1 68414.m07775 expressed protein 27 7.8
At1g59540.1 68414.m06694 kinesin motor protein-related similar t... 27 7.8
At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and gb... 27 7.8
At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N domain-... 27 7.8
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 33.1 bits (72), Expect = 0.090
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLA 400
E R +KE+EE +++++E Q+RK +E +A
Sbjct: 580 EQERQRKEREEVERKIREEQERKREEEMA 608
Score = 29.9 bits (64), Expect = 0.84
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +2
Query: 263 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 412
E++ K KK +E R KK +EEA KR +E+ + +E+ER + E
Sbjct: 605 EEMAKRREQERQKKEREEMER-KKREEEARKREEEMAKIREEERQRKERE 653
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLANDFE 412
E R +KE+EE +++ +E Q+RK +E A E
Sbjct: 534 EEERQRKEREEVERKRREEQERKRREEEARKRE 566
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQE 445
KK +EA + +K +EE +K +E+ +++E+ER + E +QE
Sbjct: 507 KKREEEAEQARKREEEREKE-EEMAKKREEERQRKEREEVERKRREEQE 554
Score = 28.3 bits (60), Expect = 2.6
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +2
Query: 254 REWEQVVKDTFYTHAKKACDEANRIKKEK---EEADKRLKEIQQRKEQERLANDFEP 415
RE E+ K+ K+ +EA R ++E+ EEA KR +E +++KE+E + P
Sbjct: 643 REEERQRKEREDVERKRREEEAMRREEERKREEEAAKRAEEERRKKEEEEEKRRWPP 699
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 263 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 412
E++ K +K +E R +E++E KR +E+ +R+EQER + E
Sbjct: 573 EEMAKRREQERQRKEREEVERKIREEQER-KREEEMAKRREQERQKKERE 621
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 442
+E R K+E+EEA KR +E ++R+E+E + E E +Q
Sbjct: 473 EETERKKREEEEARKR-EEERKREEEEAKRREEERKKREEEAEQ 515
>At1g24560.1 68414.m03090 expressed protein
Length = 678
Score = 32.3 bits (70), Expect = 0.16
Identities = 12/43 (27%), Positives = 29/43 (67%)
Frame = +2
Query: 323 RIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQEAE 451
++ + +E ++R+++I++ KE+ER+AN+ +T++ E E
Sbjct: 495 QLDTQTKELNQRMRQIEELKEKERIANENVEGLMTDIAAAEEE 537
>At2g22610.1 68415.m02680 kinesin motor protein-related
Length = 1093
Score = 31.1 bits (67), Expect = 0.36
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 260 WEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTD 439
W+Q +K+ H + EA ++++ +E + RLKE Q K + +A E V T
Sbjct: 911 WQQKIKELEIKHKDEQSQEAVLLRQKIKELEMRLKE--QEKHIQEMATTREFPEVANATP 968
Query: 440 QEAE 451
E +
Sbjct: 969 NEVK 972
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 31.1 bits (67), Expect = 0.36
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +2
Query: 329 KKEKEEADKRLKEIQQRKEQER 394
KK+KEE DK+ KE +++KE+E+
Sbjct: 193 KKKKEEEDKKKKEDEKKKEEEK 214
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 272 VKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 391
+K + HA+ + KK KEE DK+ KE + +K++E
Sbjct: 167 IKKKVHKHAEIISSKTEEEKK-KEEEDKKKKEEEDKKKKE 205
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQEAE 451
K A D+ + KK+KEE +K+ KE ++++++++L + + E +E E
Sbjct: 70 KAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKE 120
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQE 445
KK ++A + KKEKE+ DK KE +K++ER + + E D+E
Sbjct: 65 KKDKEKAAKDKKEKEKKDKEEKE---KKDKERKEKEKKDKLEKEKKDKE 110
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQ--QRKEQERLANDFEPATVTELTDQEA 448
K+ ++ ++ +KEKE+ DK KE + +RKE+ER + + + + EA
Sbjct: 83 KEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKERKAKEKKDKEESEA 134
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 260 WEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKE-QERLANDFEPATVTELT 436
W Q + + K+ +EA ++ K + +KRL++++ R + ++RL E A +E++
Sbjct: 870 WRQKLAKREFRKLKQVANEAGALRLAKTKLEKRLEDLEWRLQLEKRLRTSGEEAKSSEIS 929
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 30.3 bits (65), Expect = 0.64
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 263 EQVVKDTFYTHAKKACDEANRIKKEKEEA--DKRLKEIQQRKEQERL 397
E++ + T + K D ++KKEKE A + R KE Q R+E+E L
Sbjct: 119 EEIERRTKEAYEKMFLDVEIQLKKEKEAALNEARRKEEQARREREEL 165
>At4g26760.1 68417.m03855 microtubule associated protein
(MAP65/ASE1) family protein low similarity to protein
regulating cytokinesis 1 (PRC1) [Homo sapiens]
GI:2865521; contains Pfam profile PF03999: Microtubule
associated protein (MAP65/ASE1 family)
Length = 578
Score = 29.9 bits (64), Expect = 0.84
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPA 418
DE +++E+E+ +RLKE Q+K+QE+ D E A
Sbjct: 464 DEYTMLRQEREDEKRRLKE--QKKQQEQPHTDQESA 497
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 296 AKKACDEANRIKK--EKEEADKRLKEIQQRKEQERLAND 406
A++ + R+K E+EE ++++KE Q+R+E ER A +
Sbjct: 756 AREKAELEQRLKATLEQEEKERQIKERQEREENERRAKE 794
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +2
Query: 311 DEANRIK--KEKEEADKRLKEIQQRKEQER 394
++ RIK +EKEE ++R+KE +++ E E+
Sbjct: 735 EKERRIKEAREKEENERRIKEAREKAELEQ 764
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 257 EWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 394
E EQ +K T K + + ++E+EE ++R KE+ ++ E ER
Sbjct: 761 ELEQRLKATLEQEEK---ERQIKERQEREENERRAKEVLEQAENER 803
>At4g02940.1 68417.m00401 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to A. thaliana hypothetical
protein T13L16.2, GenBank accession number 2708738;
contains Pfam domain PF03171 2OG-Fe(II) oxygenase
superfamily
Length = 569
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 296 AKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTE 430
AKKA E + KK +EEA++ LKE+ +E+E F VTE
Sbjct: 122 AKKA--EDLKQKKTEEEAEEDLKEVVATEEEEVKKECFNGEKVTE 164
>At3g57060.1 68416.m06353 non-SMC condensin subunit, XCAP-D2/Cnd1
family protein similar to 13S condensin XCAP-D2 subunit
[Xenopus laevis] GI:3764087; contains Pfam profile
PF04594: Non-SMC condensin subunit, XCAP-D2/Cnd1
Length = 1439
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 220 DKKLTIVFSRSFTPPSCCCAIARSMESNLS 131
D+ ++V S PPSC C + S+ SNLS
Sbjct: 66 DRVYSLVRSFFSLPPSCKCNLVESLRSNLS 95
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRK-EQERLANDFEPATVTELTDQEAE 451
+K + N++ + KEE +KR K I + + E L + + A V EL Q E
Sbjct: 133 RKLLSDKNKLNRAKEELEKREKTISEASLKHESLQEELKRANV-ELASQARE 183
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 28.7 bits (61), Expect = 1.9
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +2
Query: 254 REWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTEL 433
+E Q KD A+K + R K+E K ++ ++++E+ERL + E + E
Sbjct: 200 KEDRQGKKDVKIKVAEKKVPKHVREKQETLARWKEAEDGKKKEEEERLRKEEEERRIEEE 259
Query: 434 TDQEAE 451
++EAE
Sbjct: 260 REREAE 265
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQE 445
+K E +R KKE E A K+ E +++KE+ER +FE A ++E
Sbjct: 1564 EKKKKEEDRKKKEAEMAWKQEME-KKKKEEERKRKEFEMADRKRQREEE 1611
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRK 382
+K + A+R K+++EE DKRLKE ++R+
Sbjct: 1596 RKEFEMADR-KRQREEEDKRLKEAKKRQ 1622
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRKEQER 394
+K +E R +KE++E +KR + ++R+E+ER
Sbjct: 799 RKRDEEKVRKEKERDEKEKRKDKDKERREKER 830
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; contains TIGRFAM TIGR00864:
polycystin cation channel protein; similar to
fimbriae-associated protein Fap1 [Streptococcus
parasanguinis] (GI:3929312)
Length = 1498
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPA 418
DE + EKE+ ++RLK + RKE + L ND A
Sbjct: 955 DEVKQALDEKEKTEERLKVL--RKELDALRNDLSKA 988
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor
3 large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLK--EIQQRKEQERLA 400
+K E +++ E+EE KRLK ++ + EQ+RLA
Sbjct: 574 RKEDQERQQLEMEREEEQKRLKLQKLTEEAEQKRLA 609
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 293 HAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFE 412
+ K+ D +R+K EK EAD+R K + +E E + + E
Sbjct: 324 YRKQKKDYEDRLKIEKAEADERKKMRELEREMEGIEEEDE 363
>At3g12980.1 68416.m01617 histone acetyltransferase 5 (HAC5)
identical to HAC5 (GI:21105780) [Arabidopsis thaliana];
similar to CREB-binding protein GB:S39162 from [Homo
sapiens]
Length = 1670
Score = 27.9 bits (59), Expect = 3.4
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +2
Query: 254 REWEQ-VVKDTFY-THAKKACDEANRIKKEKEEADKRLKEIQQRKEQ 388
RE E+ V KDT H K+ + ++ K+E KR+ EI KE+
Sbjct: 818 RELEKPVCKDTHMGRHGVKSALDGESLRLSKQEKPKRMNEISAPKEE 864
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 263 EQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQER 394
EQ+ K+ +++ C E+ R++KE E + LK+++ R+ + R
Sbjct: 37 EQIQKED---SSEEICTESERMRKETELIETSLKQLEARENELR 77
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 287 YTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLAN 403
Y K+ DE R+K+++EE L+E ++R + R A+
Sbjct: 463 YRKEKERIDEIRRLKQKREELMFSLQEAERRYDLARAAD 501
>At1g16520.1 68414.m01977 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELT 436
++A+R++++ EAD RLK + + D TVT+LT
Sbjct: 67 EKASRLERDCREADSRLKVVLEDNMNLTKEKDSLAMTVTKLT 108
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +2
Query: 275 KDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQE 445
K++F +KA + + +KEK +A K+LK Q RKE + A + + +QE
Sbjct: 20 KESFEESKEKAAEMS---RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQE 73
>At3g62940.2 68416.m07071 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 332
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 293 HAKKACDEANRIKKEKEEADK--RLKEIQQRKEQERLAND 406
H+K + R K+ KEEAD+ R+KE Q + +R+ +
Sbjct: 130 HSKPSKSVKRREKRAKEEADREQRIKEEQSHVKSDRMVEN 169
>At3g62940.1 68416.m07070 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 316
Score = 27.5 bits (58), Expect = 4.5
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 293 HAKKACDEANRIKKEKEEADK--RLKEIQQRKEQERLAND 406
H+K + R K+ KEEAD+ R+KE Q + +R+ +
Sbjct: 114 HSKPSKSVKRREKRAKEEADREQRIKEEQSHVKSDRMVEN 153
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQ 376
KKA +A RIKK+ EE K+ ++++
Sbjct: 473 KKAARDARRIKKKAEEEHKKKNKVEE 498
>At2g38823.1 68415.m04770 expressed protein
Length = 258
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQ 376
D N +KK EA+KRLK+++Q
Sbjct: 16 DYDNNLKKHNLEAEKRLKKVEQ 37
>At2g25170.1 68415.m03010 chromatin remodeling factor CHD3 (PICKLE)
identical to chromatin remodeling factor CHD3
[Arabidopsis thaliana] GI:6478518
Length = 1384
Score = 27.5 bits (58), Expect = 4.5
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 260 WEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQ--RKEQERLANDFEPATVTEL 433
WE+++KD F H +E N + K K + K+L I++ E +++D + + E
Sbjct: 855 WEELLKDKFELH---QAEELNALGKRK-RSRKQLVSIEEDDLAGLEDVSSDGDESYEAES 910
Query: 434 TDQEA 448
TD EA
Sbjct: 911 TDGEA 915
>At5g43310.1 68418.m05293 COP1-interacting protein-related contains
similarity to COP1-Interacting Protein 7 (CIP7)
[Arabidopsis thaliana] GI:3327868
Length = 1237
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +2
Query: 290 THAKKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQEAE 451
T A DEA R K+ + + Q ER ++EP ++ + ++E E
Sbjct: 615 TRVSSARDEAGRNKRNAIDIGSEISSCYQTDGNERKQVNYEPHDLSLIPERETE 668
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLAN 403
+ ++KKEKEE D++ E + + Q+R+A+
Sbjct: 747 DLQKMKKEKEEEDRKRIEALKIERQKRIAS 776
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +2
Query: 299 KKACDEANRIKKEK---EEADKRLKEIQQRKEQERLANDFE 412
KK +E N++++EK E+ K+L+E +++ E+E+ +FE
Sbjct: 51 KKHKEEKNKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFE 91
>At4g40020.1 68417.m05666 hypothetical protein
Length = 615
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 254 REWEQVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQE 391
+E +VV+ KK +E KKEK+E+ K KE ++KE +
Sbjct: 388 KEVVEVVEKKIEEKEKK--EEKKENKKEKKESKKEKKEHSEKKEDK 431
>At4g25950.1 68417.m03733 vacuolar ATP synthase, putative /
V-ATPase, putative / vacuolar proton pump, putative
similar to Swiss-Prot:O82629 vacuolar ATP synthase
subunit G 2 (V-ATPase G subunit 2, Vacuolar proton pump
G subunit 2) [Arabidopsis thaliana]
Length = 108
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2
Query: 323 RIKKEKEEADKRLKEIQQRKEQE 391
R+K+ K+EA+K ++E + R E+E
Sbjct: 34 RMKQAKDEAEKEMEEYRSRLEEE 56
>At4g23800.1 68417.m03422 high mobility group (HMG1/2) family
protein similar to HMG2B [Homo sapiens] GI:32335;
contains Pfam profile PF00505: HMG (high mobility group)
box
Length = 456
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 299 KKACDEANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQEA 448
KK KK KE + ++E ++ KE+E L+ E + +L QEA
Sbjct: 297 KKKAPYEKVAKKNKETYLQAMEEYKRTKEEEALSQKKEEEELLKLHKQEA 346
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 266 QVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQ 376
Q + Y H AC R+KKE++EA + L E+++
Sbjct: 99 QELSHALYQH-DSACRVIARLKKERDEARQLLAEVER 134
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 266 QVVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQ 376
Q + Y H AC R+KKE++EA + L E+++
Sbjct: 99 QELSHALYQH-DSACRVIARLKKERDEARQLLAEVER 134
>At1g14840.1 68414.m01775 expressed protein
Length = 604
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 442
E NR++ E + D+ L E Q + RL+ V ELT++
Sbjct: 54 ELNRLENEVRDKDRELSEGQAEIKALRLSERQREKAVEELTEE 96
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 311 DEANRIKKEKEEADKR--LKEIQQRKEQERLANDFEPATVTELTDQEAE 451
DE + +++E EE+ + ++ + Q ++ + + ND EP D+E E
Sbjct: 361 DEDDDVEEEDEESGEGYLVQPVSQVEDHDAVGNDIEPINEDNDPDEEEE 409
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQERLAND 406
DEA R + ++EE + L I+Q+ E R A++
Sbjct: 2277 DEAERQRLQREELEMELHTIRQQMESARNADE 2308
>At3g14670.1 68416.m01856 hypothetical protein
Length = 232
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 311 DEANRIKKEKEEADKRLKEIQQRKEQER 394
+E N K EKEE+++ E ++++E+E+
Sbjct: 78 EEENSEKDEKEESEEEESEEEEKEEEEK 105
>At2g01750.1 68415.m00104 expressed protein
Length = 629
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQ 442
E NR++ + + D+ L E Q + RL+ V ELT++
Sbjct: 78 ELNRLENDVRDKDRELSESQAEIKALRLSERQREKAVEELTEE 120
>At1g68060.1 68414.m07775 expressed protein
Length = 622
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLANDFEPATVTELTDQEAE 451
E NR++ E + D+ L E + RL+ ELTD+ A+
Sbjct: 71 ELNRLENEVRDKDRELSEANAEIKALRLSERQREKACEELTDELAK 116
>At1g59540.1 68414.m06694 kinesin motor protein-related similar to
kinesin motor protein (kin2) GI:2062751 from (Ustilago
maydis)
Length = 823
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/40 (25%), Positives = 23/40 (57%)
Frame = +2
Query: 269 VVKDTFYTHAKKACDEANRIKKEKEEADKRLKEIQQRKEQ 388
++K+ + K+ C + ++ +E +K +KE+Q KE+
Sbjct: 705 IIKERYNELEKELCLDKQLLEASRESHEKLIKEVQFLKEE 744
>At1g16210.1 68414.m01941 expressed protein ESTs gb|T04357 and
gb|AA595092 come from this gene
Length = 234
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 314 EANRIKKEKEEADKRLKEIQQRKEQERLANDFE 412
++ +KK +EEA+K+ + ++ E +RLA E
Sbjct: 45 KSKAVKKREEEAEKKAETAAKKLEAKRLAEQEE 77
>At1g04850.1 68414.m00481 ubiquitin-associated (UBA)/TS-N
domain-containing protein weak similarity to SP|P45974
Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.1.2.15)
{Homo sapiens}; contains Pfam profile PF00627: UBA/TS-N
domain
Length = 413
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 302 KACDEANRIKKEKEEADKRLKEIQQRKEQERLAND-FEPATVTELTDQE 445
KA + R +K+KEE +KR+ E ++ KE+ R+ + E + E+ +++
Sbjct: 184 KAQELRERARKKKEEEEKRM-EREREKERIRIGKELLEAKRMEEVNERK 231
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,202,850
Number of Sequences: 28952
Number of extensions: 122935
Number of successful extensions: 739
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 742437000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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