Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00825
         (608 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q75L73 Cluster: Putative uncharacterized protein OSJNBa...    33   7.0  
UniRef50_A2E5G7 Cluster: AT hook motif family protein; n=1; Tric...    33   7.0  
UniRef50_UPI00005A1442 Cluster: PREDICTED: hypothetical protein ...    32   9.3  
UniRef50_A5CBU7 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  
UniRef50_Q5AXY1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  
UniRef50_A6R3D5 Cluster: Predicted protein; n=1; Ajellomyces cap...    32   9.3  

>UniRef50_Q75L73 Cluster: Putative uncharacterized protein
           OSJNBa0095N06.6; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0095N06.6 - Oryza sativa subsp. japonica (Rice)
          Length = 163

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +3

Query: 294 PPMRSRT*RPASVRPRAQGILGPTH*MSPLHSHTRR 401
           PP+RS + R A   P A G++   H + PLH H RR
Sbjct: 47  PPVRSASIRAAGSSPAALGLIRACH-VRPLHGHHRR 81


>UniRef50_A2E5G7 Cluster: AT hook motif family protein; n=1;
           Trichomonas vaginalis G3|Rep: AT hook motif family
           protein - Trichomonas vaginalis G3
          Length = 670

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
 Frame = -1

Query: 527 QSELCPTFLEEQQNVHNTELLGSQVNAGYRGNPRTLTP-DGDRTS-GVRVQGRHLVGGP* 354
           +S++ PT  E  QNV N+E    +     + NP    P +G R    +  +G+       
Sbjct: 365 KSQIIPTTNENDQNVTNSETTEKRKVGRPKKNPANTQPQEGSRVQIEIPKEGQDSSAAVK 424

Query: 353 NSLG-PRSNTCRSSSPGPHRRFDPRHEKEKRKNGTRIKTSLSIQDQIYIKKASSFSECRQ 177
             +G PR N   S +       + + +KEK+K G   K S +I D     ++    E R 
Sbjct: 425 RKVGRPRKNPISSENKVEQ---EQQQQKEKKKPGRPKKNSNTILDIFSRLESQETPEKRS 481

Query: 176 E 174
           E
Sbjct: 482 E 482


>UniRef50_UPI00005A1442 Cluster: PREDICTED: hypothetical protein
           XP_862076; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_862076 - Canis familiaris
          Length = 274

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 285 GVEPPMRSRT*RPASVRPRAQGILG-PTH*MSPLHSHTRRPISVRGQSTGVPAVPC 449
           G  PP+ +   +P S    AQG  G PT   S     TR+P  +R  S  VPAVPC
Sbjct: 106 GARPPLPAGGPQPTSAHLAAQGRPGSPTEAAS-----TRQPPMLRACSPPVPAVPC 156


>UniRef50_A5CBU7 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 453

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 367 WVGPKIPWARGLTLAGRQVRD-LIGGSTPG 281
           WV   +PW+     AG++VRD  +GGS  G
Sbjct: 212 WVSQVVPWSESCRSAGQEVRDEFVGGSRTG 241


>UniRef50_Q5AXY1 Cluster: Putative uncharacterized protein; n=1;
           Emericella nidulans|Rep: Putative uncharacterized
           protein - Emericella nidulans (Aspergillus nidulans)
          Length = 302

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 335 SNTCRSSSPGPHRRFDPRHEKEKRKNGTRIKTSLSIQDQIYIKKAS--SFSECRQEN 171
           ++ CR      +   + R+E+EK KN    +T  S++D I + K    + SEC  E+
Sbjct: 198 ASKCRQKKKEQNHMLETRYEQEKMKNEELTRTVNSLRDAIVVAKDQLLAHSECGHES 254


>UniRef50_A6R3D5 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 891

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 437 GNPRTLTPDGDRTSGVRVQGRHLVGGP*NSLGPRSNTCRSSSPGPHRRFDP 285
           GNPRT T + D  +G+      L+    N  G ++N   SSS    R+  P
Sbjct: 88  GNPRTYTDNNDGNAGIAAPNNDLIESSGNPSGEQNNDYDSSSDCESRQQKP 138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,272,356
Number of Sequences: 1657284
Number of extensions: 12190255
Number of successful extensions: 28297
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28274
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)