Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00825
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56799-1|CAA40135.1| 1365|Drosophila melanogaster supressor two ...    28   8.7  
X56798-1|CAA40134.1| 1364|Drosophila melanogaster suppressor two...    28   8.7  
BT022149-1|AAY51544.1|  602|Drosophila melanogaster IP01427p pro...    28   8.7  
AE013599-1626|AAF58433.1| 1368|Drosophila melanogaster CG3905-PA...    28   8.7  

>X56799-1|CAA40135.1| 1365|Drosophila melanogaster supressor two of
           zeste protein.
          Length = 1365

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 362 GP*NSLGPRSNTCRSSSPGPHRRFDPRHEKE-KRKNGTRIKTSLSIQDQ 219
           G  +SLG    +  +S+   HR+   +H KE K  NG R K    I  Q
Sbjct: 477 GSSSSLGTADASTSTSTSSSHRKRKKKHSKEPKDANGKRKKLHAEISSQ 525


>X56798-1|CAA40134.1| 1364|Drosophila melanogaster suppressor two of
           zeste protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 362 GP*NSLGPRSNTCRSSSPGPHRRFDPRHEKE-KRKNGTRIKTSLSIQDQ 219
           G  +SLG    +  +S+   HR+   +H KE K  NG R K    I  Q
Sbjct: 477 GSSSSLGTADASTSTSTSSSHRKRKKKHSKEPKDANGKRKKLHAEISSQ 525


>BT022149-1|AAY51544.1|  602|Drosophila melanogaster IP01427p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 362 GP*NSLGPRSNTCRSSSPGPHRRFDPRHEKE-KRKNGTRIKTSLSIQDQ 219
           G  +SLG    +  +S+   HR+   +H KE K  NG R K    I  Q
Sbjct: 477 GSSSSLGTADASTSTSTSSSHRKRKKKHSKEPKDANGKRKKLHAEISSQ 525


>AE013599-1626|AAF58433.1| 1368|Drosophila melanogaster CG3905-PA
           protein.
          Length = 1368

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 362 GP*NSLGPRSNTCRSSSPGPHRRFDPRHEKE-KRKNGTRIKTSLSIQDQ 219
           G  +SLG    +  +S+   HR+   +H KE K  NG R K    I  Q
Sbjct: 477 GSSSSLGTADASTSTSTSSSHRKRKKKHSKEPKDANGKRKKLHAEISSQ 525


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,059,489
Number of Sequences: 53049
Number of extensions: 586192
Number of successful extensions: 1623
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)