Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00825
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-14|AAA81498.4|  727|Caenorhabditis elegans Hypothetical p...    29   2.0  
U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain (pr...    29   2.0  
AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z79756-3|CAB02121.1|  527|Caenorhabditis elegans Hypothetical pr...    28   4.5  
U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain (pr...    28   6.0  
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>U40800-14|AAA81498.4|  727|Caenorhabditis elegans Hypothetical
           protein D2096.11 protein.
          Length = 727

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 447 RVPREPPYSDPGRRSDVGCES 385
           R+PR P    PGR+S VGC S
Sbjct: 658 RIPRTPSDKTPGRQSRVGCVS 678


>U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform c
           protein.
          Length = 912

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = +2

Query: 299 YEVPDLTTCKC*TAGPRNFRAHPLNVSPALSHP-TSDLRPGSEYGGS 436
           Y++    TCK   A  +N RAH  NV   L  P  SD    S+Y  S
Sbjct: 810 YDITSWATCKSQRAMLKNMRAHTHNVQYRLLSPMNSDFDAQSQYYNS 856


>AF038621-4|AAK71387.2| 1064|Caenorhabditis elegans Hypothetical
            protein M116.5 protein.
          Length = 1064

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 447  RVPREPPYSDPGRRSDVGCES 385
            R+PR P    PGR+S VGC S
Sbjct: 991  RIPRTPSDKTPGRQSRVGCVS 1011


>Z79756-3|CAB02121.1|  527|Caenorhabditis elegans Hypothetical
           protein F53C11.4 protein.
          Length = 527

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +3

Query: 159 RSKSVLLSAFTKRTRLFNVNLILN*QRR 242
           R KSV  S   ++TRLFN N  +N Q+R
Sbjct: 461 RKKSVSFSERIEQTRLFNSNTSINAQKR 488


>U23448-6|AAL27225.1|  915|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform a
           protein.
          Length = 915

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +2

Query: 299 YEVPDLTTCKC*TAGPRNFRAHPLNVSPALSHP---TSDLRPGSEYGGS 436
           Y++    TCK   A  +N RAH  NV   L  P    SD    S+Y  S
Sbjct: 811 YDITSWATCKSQRAMLKNMRAHTHNVQYRLLSPMFKNSDFDAQSQYYNS 859


>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
            C38D4.3 protein.
          Length = 1784

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 21/84 (25%), Positives = 38/84 (45%)
 Frame = -1

Query: 422  LTPDGDRTSGVRVQGRHLVGGP*NSLGPRSNTCRSSSPGPHRRFDPRHEKEKRKNGTRIK 243
            + P GD  +  +VQ + +      S   RS++ + S+     R DP+   E+ +  +R  
Sbjct: 1328 IVPTGDEDTADKVQEQAVEEDRPPSRNTRSSSVQKSTSQVEDR-DPKELVEEERPPSRNT 1386

Query: 242  TSLSIQDQIYIKKASSFSECRQEN 171
             S S+Q     +K S   E  +E+
Sbjct: 1387 RSASVQKSSNQEKTSESGEVTEED 1410


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,483,597
Number of Sequences: 27780
Number of extensions: 287575
Number of successful extensions: 627
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)