Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00823
         (785 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XUQ1 Cluster: Putative uncharacterized protein; n=1; ...    36   0.87 
UniRef50_Q5CWV9 Cluster: Putative uncharacterized protein; n=3; ...    36   1.5  
UniRef50_Q4MZY0 Cluster: Membrane transporter, putative; n=2; Th...    35   2.7  
UniRef50_A6EGM7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_A0RR84 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_Q84578 Cluster: A261R protein; n=1; Paramecium bursaria...    33   8.1  
UniRef50_A4AB51 Cluster: Putative uncharacterized protein; n=2; ...    33   8.1  

>UniRef50_Q4XUQ1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 194

 Score = 36.3 bits (80), Expect = 0.87
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = -2

Query: 676 LFYLRTKDQRSFAKIQNNCYYIRHSEICCQ-FSNDNERFRTMNKTIFYKHYV--YTYCQS 506
           L+  +T D  +F    N  + +   ++C Q FS +   F  + + +FYKH +  Y + + 
Sbjct: 103 LYIFKTLDHFNFLNTTNTFFNLLLKQLCEQIFSINTSTFLAILQ-LFYKHKISHYYFLKK 161

Query: 505 TCGIIFLARNVKWLYKTKSVRNVRPIVV 422
           +  II + R  + LY   SV+N +P+V+
Sbjct: 162 SNYIINMNRYFQILYSAMSVKN-KPVVI 188


>UniRef50_Q5CWV9 Cluster: Putative uncharacterized protein; n=3;
            Cryptosporidium|Rep: Putative uncharacterized protein -
            Cryptosporidium parvum Iowa II
          Length = 1399

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 4/117 (3%)
 Frame = -2

Query: 589  QFSNDNERFRTMNKTIFYKHYVYTYCQSTCGIIFLARNVKWLYKTKSVRNVRPIVVAETI 410
            +FSND   +  ++       +V  +    C    + +N      T++++N    ++  TI
Sbjct: 751  RFSNDTNLYGNISMIDENIGFVGGFVHILC-YTMIKKNQSVQVLTQALKNFLKHMIHSTI 809

Query: 409  S----VYHNRST*IKMDIGLLTKICWLYSTPVIITVQLISAVNSHVFLFEGREHHTY 251
                 VY+N S    +DIG++ + CW++ST V + +     + S  F  E   ++ Y
Sbjct: 810  EQIPQVYNNTSFSNNIDIGVVPQCCWIWSTYVFLKI-----IKSFTFCLENINNNDY 861


>UniRef50_Q4MZY0 Cluster: Membrane transporter, putative; n=2;
           Theileria|Rep: Membrane transporter, putative -
           Theileria parva
          Length = 450

 Score = 34.7 bits (76), Expect = 2.7
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -3

Query: 723 VFFFLSYINEFGEISRYFISERKINGRLPKFKIIAITYV 607
           ++  LSYIN FG I+ Y +S  ++  + P      I+Y+
Sbjct: 38  IYTILSYINTFGNIAMYLVSYMRVTAKNPGINYSVISYI 76


>UniRef50_A6EGM7 Cluster: Putative uncharacterized protein; n=1;
           Pedobacter sp. BAL39|Rep: Putative uncharacterized
           protein - Pedobacter sp. BAL39
          Length = 525

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -2

Query: 670 YLRTKDQRSFAKIQNNCYYIRHSEICCQFSNDNERFRTMNKTIFYKHYVYT 518
           Y   K Q SFA  + +   I+  E   QF   +ER++ + K++FY  + YT
Sbjct: 58  YALGKTQLSFASEKGDLRRIQQPESRDQFRFQSERYQPLGKSVFYGSFSYT 108


>UniRef50_A0RR84 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter fetus subsp. fetus 82-40|Rep: Putative
           uncharacterized protein - Campylobacter fetus subsp.
           fetus (strain 82-40)
          Length = 740

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 526 HSVCKKLFCSLFEIAHYRLKIDNKFQNDVCNSNYFEFWQTT 648
           + VCKKLF        Y LK+DN  Q ++ N+N   FW+ T
Sbjct: 147 YDVCKKLFDP-----DYYLKLDNAQQRNILNNNLIIFWKFT 182


>UniRef50_Q84578 Cluster: A261R protein; n=1; Paramecium bursaria
           Chlorella virus 1|Rep: A261R protein - Paramecium
           bursaria Chlorella virus 1 (PBCV-1)
          Length = 136

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
 Frame = +1

Query: 517 TYIHSVCKKLF-CS--------LFEIAHYRLKIDNKFQNDVCNSNYFEFWQTTVDLSF*D 669
           TYI ++ KKLF C         LFE+  +  K  N+    +C++    FW +  D  + D
Sbjct: 13  TYIRNILKKLFYCKNTSEFEQLLFELIDFIKKCRNRSWRSICDTRAELFWHSDYDFGYMD 72

Query: 670 KIATYFPKLIDVR-*KKENVIK 732
             +  F K  ++    KEN IK
Sbjct: 73  LFSIVFLKRKELMYVLKENEIK 94


>UniRef50_A4AB51 Cluster: Putative uncharacterized protein; n=2;
           Congregibacter litoralis KT71|Rep: Putative
           uncharacterized protein - Congregibacter litoralis KT71
          Length = 236

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -3

Query: 537 TNTMYIRIVNQHVELFFSHATSN 469
           T  +Y+RI N+HVEL+F+H  S+
Sbjct: 44  TEALYLRIFNEHVELWFAHPRSH 66


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,344,932
Number of Sequences: 1657284
Number of extensions: 14722660
Number of successful extensions: 33765
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33756
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)