Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00822
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 279 1e-75
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 279 1e-75
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 265 2e-71
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 186 1e-53
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 180 7e-46
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 180 7e-46
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 163 1e-40
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 132 2e-31
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 79 3e-15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 79 3e-15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 79 3e-15
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 74 1e-13
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 74 1e-13
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 41 0.001
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 41 0.001
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 36 0.021
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 36 0.028
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 35 0.064
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 34 0.085
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.15
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.20
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 31 0.60
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 31 0.60
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.4
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.4
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.4
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.4
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 3.2
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 3.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 279 bits (685), Expect = 1e-75
Identities = 139/170 (81%), Positives = 145/170 (85%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI E
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNE 173
Score = 109 bits (261), Expect = 2e-24
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD
Sbjct: 174 VSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALD 233
Query: 688 AILP 699
+I+P
Sbjct: 234 SIIP 237
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 279 bits (685), Expect = 1e-75
Identities = 139/170 (81%), Positives = 145/170 (85%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI E
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNE 173
Score = 109 bits (261), Expect = 2e-24
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD
Sbjct: 174 VSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALD 233
Query: 688 AILP 699
+I+P
Sbjct: 234 SIIP 237
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 265 bits (649), Expect = 2e-71
Identities = 149/232 (64%), Positives = 159/232 (68%), Gaps = 1/232 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEYPHTSRRLAT 538
EAGISKNGQTREHALLA TLGVKQL+ S P P +SRR T
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLV-------SLRSP----------TRSPDSSRRSDT 166
Query: 539 TQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVKKAKLTENASLKLSMPS 694
Q L D TETTC C GSRDG + +K L E S +L PS
Sbjct: 167 IQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPS 218
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 186 bits (452), Expect(2) = 1e-53
Identities = 92/114 (80%), Positives = 97/114 (85%), Gaps = 1/114 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVA 340
KAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 109 bits (261), Expect = 2e-24
Identities = 47/64 (73%), Positives = 55/64 (85%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+EALD
Sbjct: 140 VSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALD 199
Query: 688 AILP 699
+I+P
Sbjct: 200 SIIP 203
Score = 41.9 bits (94), Expect(2) = 1e-53
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2
Query: 431 LIVGVNKMDSTEPPYSEPRFEEIKKE 508
L+V NKMDSTEPP+SE RF EI E
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNE 139
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 180 bits (439), Expect = 7e-46
Identities = 92/170 (54%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 182 KAERE---WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ ERE S E + +++ L+DAPGH+DFI NMITGTSQAD A+L+V A TG
Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIV--LLDAPGHKDFISNMITGTSQADAAILVVNATTG 284
Query: 353 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 502
EFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK
Sbjct: 285 EFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIK 332
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 180 bits (439), Expect = 7e-46
Identities = 92/170 (54%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 182 KAERE---WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ ERE S E + +++ L+DAPGH+DFI NMITGTSQAD A+L+V A TG
Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIV--LLDAPGHKDFISNMITGTSQADAAILVVNATTG 302
Query: 353 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 502
EFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK
Sbjct: 303 EFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIK 350
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 163 bits (396), Expect = 1e-40
Identities = 87/199 (43%), Positives = 121/199 (60%), Gaps = 8/199 (4%)
Frame = +2
Query: 5 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 184
K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 185 AEREW-----YHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 349
ERE Y E R+ +L DAPGH+ F+ NMI G +QAD AVL+++A
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTIL----DAPGHKSFVPNMIVGANQADLAVLVISARR 222
Query: 350 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEYPHTSRR 529
GEFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ + R+
Sbjct: 223 GEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRK 282
Query: 530 LA---TTQLLSLSCPFLDG 577
L T + + C L G
Sbjct: 283 LGFNPKTDITYVPCSGLTG 301
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 508 ISSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEAL 684
++ +++K+G+NP + +VP SG G + + T W G C IE +
Sbjct: 276 LTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEG--NWY--------SGPCFIEFI 325
Query: 685 DAILP 699
D +LP
Sbjct: 326 DVLLP 330
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 132 bits (319), Expect = 2e-31
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAER 193
K +
Sbjct: 64 KVTK 67
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 79.0 bits (186), Expect = 3e-15
Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 172
+K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L
Sbjct: 46 DKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHL 105
Query: 173 DKLKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ A+R + H ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 106 EYETAKRHYAH-----------------IDCPGHADYIKNMITGAAQMEGAILVVAATDG 148
Query: 353 EFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 487
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 149 PMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 79.0 bits (186), Expect = 3e-15
Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 172
+K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L
Sbjct: 47 DKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHL 106
Query: 173 DKLKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ A+R + H ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 107 EYETAKRHYAH-----------------IDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Query: 353 EFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 487
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 150 PMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 79.0 bits (186), Expect = 3e-15
Identities = 60/167 (35%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 172
+K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L
Sbjct: 47 DKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHL 106
Query: 173 DKLKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ A+R + H ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 107 EYETAKRHYAH-----------------IDCPGHADYIKNMITGAAQMEGAILVVAATDG 149
Query: 353 EFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPR 487
QTREH LLA +GV ++V +NK+D E P +E R
Sbjct: 150 PMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 73.7 bits (173), Expect = 1e-13
Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +2
Query: 5 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 178
K ++N+ IGH+D GK+T T + + G K KF++ + GK K ++
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDEI--DKGKEEKKRGITINV 98
Query: 179 LKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
E RY D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 99 AHIGYESPLRRYSHT------------DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 466
E QT+EH +LA +GVK + + +NK D E
Sbjct: 147 E-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 73.7 bits (173), Expect = 1e-13
Identities = 56/156 (35%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +2
Query: 5 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 178
K ++N+ IGH+D GK+T T + + G K KF++ + GK K ++
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDEI--DKGKEEKKRGITINV 98
Query: 179 LKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
E RY D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 99 AHIGYESPLRRYSHT------------DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 466
E QT+EH +LA +GVK + + +NK D E
Sbjct: 147 E-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 44.8 bits (101), Expect = 6e-05
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 197 -WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 373
+ + +R+ L LID PGH DF + + D +L+VAA G
Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138
Query: 374 KNGQTREHALLAFTLGVKQLIVGVNKMD 457
QT + LAF + Q+I +NK+D
Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
LID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA ++
Sbjct: 76 LIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRV 128
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKK 505
I+ +NK D E ++++K
Sbjct: 129 IIVLNKCDLAEKSKISESAKKVRK 152
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 40.7 bits (91), Expect = 0.001
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 169
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 170 LDKLKAEREWYHNRYCSLEVRN*Q-----VLCYLIDAPGHRDFIKNMITGTSQADCAVLI 334
L+K E N++ ++EV + L LID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVV 140
Query: 335 VAAGTG 352
V +G
Sbjct: 141 VDCVSG 146
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGSFKYAWV 169
N+ VI HVD GKST T L+ K G I K +F K+ QE + + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAISLFFE 80
Query: 170 LDKLKAEREWYHNRYCSLEVRN*Q-----VLCYLIDAPGHRDFIKNMITGTSQADCAVLI 334
L+K E N++ ++EV + L LID+PGH DF + D A+++
Sbjct: 81 LEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVV 140
Query: 335 VAAGTG 352
V +G
Sbjct: 141 VDCVSG 146
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 36.3 bits (80), Expect = 0.021
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH F G AD VL+VAA G E QT + A V QL+
Sbjct: 209 LDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLV 260
Query: 437 VGVNKMD 457
V VNK+D
Sbjct: 261 VAVNKID 267
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 35.9 bits (79), Expect = 0.028
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 3/115 (2%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 197 ---WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ +L+ + ++ LID PGH DF + D V+++ G
Sbjct: 74 RGITVQSAAVNLDWKGHRI--NLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH + M+ G + D A L+VA QT EH + + L+
Sbjct: 132 VDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQLNHLM 185
Query: 437 VGVNKMDSTEPPYSEPRFEEI 499
+ NK+D + + +E+I
Sbjct: 186 ILQNKVDIIKESQARENYEQI 206
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 34.3 bits (75), Expect = 0.085
Identities = 40/148 (27%), Positives = 59/148 (39%), Gaps = 1/148 (0%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 197 -WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 373
+ + V +ID PGH DF + D AVL++ G G G+
Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150
Query: 374 KNGQTREHALLAFTLGVKQLIVGVNKMD 457
T L + + I VNKMD
Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 450 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 322
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 33.1 bits (72), Expect = 0.20
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+ID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 434 IVGVNKMDSTEPPYSEPR---FEEIKKEYP 514
++ +NK+D S PR +E +K + P
Sbjct: 605 VIALNKIDRLYEYESNPRKDVYELLKSQKP 634
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 95 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREWY 202
+KR ++ EKE + F Y LDK+K ER+ Y
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCY 307
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 95 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREWY 202
+KR ++ EKE + F Y LDK+K ER+ Y
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERDCY 242
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 89 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREWYHNRYCSLEV 229
G+D T K ++E +E+ + + V+ L+ ER++Y ++ ++EV
Sbjct: 98 GVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEV 144
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +2
Query: 89 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAEREWYHNRYCSLEV 229
G+D T K ++E +E+ + + V+ L+ ER++Y ++ ++EV
Sbjct: 227 GVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYFSKLRTIEV 273
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 14 INIVVIGHVDSGKSTTT 64
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 242 VLCYLIDAPGHRDFIKNMITGTSQADCAVLIV 337
+L LID+PGH DF + + +D A+L++
Sbjct: 83 LLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 242 VLCYLIDAPGHRDFIKNMITGTSQADCAVLIV 337
+L LID+PGH DF + + +D A+L++
Sbjct: 83 LLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 27.5 bits (58), Expect = 9.8
Identities = 44/155 (28%), Positives = 62/155 (40%), Gaps = 7/155 (4%)
Frame = +2
Query: 14 INIVVIGHVDSGKSTTTGHLIYKC----GGIDKRTIEKFEKEAQEMGKGSFKYAWVLD-K 178
+ + V+G D GKST G L C G + I +F E + GK S V+
Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIFRFPHEVR-TGKTSSVCNDVIGFD 227
Query: 179 LKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTS--QADCAVLIVAAGTG 352
+ + Y V L LID G + K I G + A L+VAA
Sbjct: 228 NRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA--- 284
Query: 353 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 457
+ GI+ TREH L L + ++ + KMD
Sbjct: 285 --DRGIT--WATREHLGLIAALNIPMFVL-ITKMD 314
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 479 EPRFEEIKKEYPHTSRRLATTQLLSLSCPF 568
EP FEE E P TS +AT + + PF
Sbjct: 353 EPEFEEHFDEQPSTSSYMATATATATATPF 382
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,474,649
Number of Sequences: 27780
Number of extensions: 361431
Number of successful extensions: 1125
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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