Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00822
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 297 5e-83
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 292 2e-81
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 186 2e-49
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 174 6e-46
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 31 0.008
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 24 1.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 22 4.9
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 6.4
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 6.4
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 297 bits (730), Expect = 5e-83
Identities = 148/170 (87%), Positives = 152/170 (89%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF
Sbjct: 64 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 173
Score = 133 bits (321), Expect = 2e-33
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALD
Sbjct: 174 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALD 233
Query: 688 AILP 699
AILP
Sbjct: 234 AILP 237
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 292 bits (716), Expect = 2e-81
Identities = 145/170 (85%), Positives = 150/170 (88%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL
Sbjct: 4 EKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVLIVAAG GEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKE
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKE 173
Score = 124 bits (300), Expect = 6e-31
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+SSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LIEALD
Sbjct: 174 VSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALD 233
Query: 688 AILP 699
AILP
Sbjct: 234 AILP 237
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 186 bits (452), Expect = 2e-49
Identities = 95/116 (81%), Positives = 99/116 (85%), Gaps = 1/116 (0%)
Frame = +2
Query: 164 WVLDKLKAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVA 340
WVLDKLKAERE +L + + +IDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 341 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKE 116
Score = 133 bits (321), Expect = 2e-33
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALD
Sbjct: 117 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALD 176
Query: 688 AILP 699
AILP
Sbjct: 177 AILP 180
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 174 bits (424), Expect = 6e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL
Sbjct: 16 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 75
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 76 IVGVNKMDSTEPPYSETRFEEIKKE 100
Score = 133 bits (321), Expect = 2e-33
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALD 687
+SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLIEALD
Sbjct: 101 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALD 160
Query: 688 AILP 699
AILP
Sbjct: 161 AILP 164
Score = 37.1 bits (82), Expect = 2e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 210 DIALWKFETSKYYVT 254
DIALWKFETSKYYVT
Sbjct: 1 DIALWKFETSKYYVT 15
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 31.5 bits (68), Expect = 0.008
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH FI G D VL+VAA G E QT + +A V +I
Sbjct: 198 LDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV-PII 249
Query: 437 VGVNKMDSTEPPYSEPRFEEIK 502
V +NK+D + ++E K
Sbjct: 250 VAINKIDKPNIDIIKVQYELAK 271
Score = 25.4 bits (53), Expect = 0.52
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 5 KTHINIVVIGHVDSGKST 58
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = -1
Query: 249 HSTC*FRTSREQYRL*YHSRSAFSLSNTQAYLKDPLPISWASFSNFSMVR 100
+STC S Q +L +H S T + + W F ++VR
Sbjct: 346 NSTCSVTNSPHQKKLRFHLAKERKASTTLGIIMSAFIVCWLPFFVLALVR 395
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 14 INIVVIGHVDSGKST 58
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 201 YHSRSAFSLSNTQAYLKDPLPISWASFSN 115
Y +RS F L N +KD L ++ F+N
Sbjct: 76 YATRSPFLLLNDPELIKDILIRDFSKFAN 104
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 248 IVLASFELPESNIDCDTTHAQPLVCPIPKHI*RILY 141
IV+ FE+ +S D A IP ++ R+L+
Sbjct: 54 IVIGGFEIEKSEDDSFNNQADKSEKRIPLYVCRVLH 89
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 107 IEKFEKEAQEMGKGSFKYAWVLDKLKAEREW 199
+ KFE E E L+KLK R W
Sbjct: 84 VPKFEGEMAEKISNELNEMCPLEKLKERRIW 114
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 609 FG*RLQHVVSVPSRNGHESDSSWV 538
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,737
Number of Sequences: 438
Number of extensions: 4493
Number of successful extensions: 30
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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