Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00822
(699 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 251 4e-67
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 251 4e-67
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 251 4e-67
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 251 4e-67
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 151 4e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 150 8e-37
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 77 1e-14
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 72 3e-13
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 43 2e-04
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 42 4e-04
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 39 0.003
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 39 0.003
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.008
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 37 0.011
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 37 0.011
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 37 0.015
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 36 0.020
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.020
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.045
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.045
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.24
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 31 0.56
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.73
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 31 0.97
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 29 2.2
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.2
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 2.2
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 3.0
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 3.0
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 3.9
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 3.9
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.2
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 6.8
At5g46380.1 68418.m05708 hypothetical protein 27 9.0
At4g03000.2 68417.m00408 expressed protein contains similarity t... 27 9.0
At4g03000.1 68417.m00407 expressed protein contains similarity t... 27 9.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 251 bits (614), Expect = 4e-67
Identities = 126/170 (74%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKL
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 124 EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 251 bits (614), Expect = 4e-67
Identities = 126/170 (74%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKL
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 124 EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 251 bits (614), Expect = 4e-67
Identities = 126/170 (74%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKL
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 124 EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 251 bits (614), Expect = 4e-67
Identities = 126/170 (74%), Positives = 139/170 (81%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
EK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKL
Sbjct: 4 EKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKL 63
Query: 182 KAEREWYHNRYCSL-EVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
KAERE +L + + C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG F
Sbjct: 64 KAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGF 123
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
EAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KE
Sbjct: 124 EAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 151 bits (366), Expect = 4e-37
Identities = 77/168 (45%), Positives = 109/168 (64%), Gaps = 2/168 (1%)
Frame = +2
Query: 8 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 187
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 188 EREWYHNRYCSLEVRN-*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 364
ERE ++ N + L+D+PGH+DF+ NMI G +QAD A+L++ A G FEA
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357
Query: 365 GISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 505
G GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+
Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQ 403
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 150 bits (364), Expect = 8e-37
Identities = 73/170 (42%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 181
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 182 KAER-EWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 358
+ ER + ++DAPGH+ ++ NMI+G SQAD VL+++A GEF
Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217
Query: 359 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
E G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI+++
Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQK 267
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 517 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 627
++K GYN V F+PISG G NM + + PW+ G
Sbjct: 271 FLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 77.0 bits (181), Expect = 1e-14
Identities = 51/158 (32%), Positives = 76/158 (48%), Gaps = 3/158 (1%)
Frame = +2
Query: 2 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK---EAQEMGKGSFKYAWVL 172
+K H+NI IGHVD GK+T T L I +K+++ +E +G +
Sbjct: 76 KKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAPEERARGI-----TI 130
Query: 173 DKLKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ E E + Y +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 131 NTATVEYETENRHYAH------------VDCPGHADYVKNMITGAAQMDGAILVVSGADG 178
Query: 353 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 466
QT+EH LLA +GV ++V +NK D +
Sbjct: 179 PMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 72.1 bits (169), Expect = 3e-13
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
Frame = +2
Query: 5 KTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 175
K H+N+ IGHVD GK+T T + + + G ++ +K +E +G ++
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVE 124
Query: 176 KLKAEREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 355
A+R + H +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 125 YETAKRHYAH-----------------VDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167
Query: 356 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 472
QT+EH LLA +GV L+ +NK+D + P
Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDP 199
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 42.7 bits (96), Expect = 2e-04
Identities = 46/164 (28%), Positives = 70/164 (42%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
N +I H+D GKST L+ G TI+K + Q + K + + K +
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTG-----TIKKGHGQPQYLDKLQ-RERGITVKAQTATM 121
Query: 197 WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 376
+Y N+ E L LID PGH DF + S A+L+V A G
Sbjct: 122 FYENKVEDQEASG--YLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------V 172
Query: 377 NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
QT + LAF + ++ +NK+D P ++P E +K +
Sbjct: 173 QAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP--ERVKAQ 210
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/112 (28%), Positives = 49/112 (43%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
NI ++ HVD GK+T HLI GG G ++ LD + +R
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG----------GVLHPRLAGKLRFMDYLD--EEQRR 58
Query: 197 WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+ S+ ++ LID+PGH DF + T +D A+++V A G
Sbjct: 59 AITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2
Query: 215 CSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 394
C + +R V C +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSC--VDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 395 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEYPHTS 523
H + +K +I+ NK+D + + E I+K +T+
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITNTN 214
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2
Query: 215 CSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 394
C + +R V C +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSC--VDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 395 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEYPHTS 523
H + +K +I+ NK+D + + E I+K +T+
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITNTN 214
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH + M+ G + D A+LI+AA QT EH + +K +I
Sbjct: 124 VDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLKDII 177
Query: 437 VGVNKMDSTEPPYSEPRFEEIKKEYPHTS 523
+ NK+D + + + E+I++ +T+
Sbjct: 178 IIQNKIDLIQENEAIKQHEDIQRFITNTN 206
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 37.1 bits (82), Expect = 0.011
Identities = 33/127 (25%), Positives = 56/127 (44%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
NI + H+DSGK+T T +++ G R E E ++ G G+ + L++ K
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGAKMDSMDLEREKGITI 121
Query: 197 WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 376
YC+ + +ID PGH DF + D A+L++ + G I+
Sbjct: 122 QSAATYCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 377 NGQTREH 397
+ Q R +
Sbjct: 178 DRQMRRY 184
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 37.1 bits (82), Expect = 0.011
Identities = 33/127 (25%), Positives = 56/127 (44%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
NI + H+DSGK+T T +++ G R E E ++ G G+ + L++ K
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGAKMDSMDLEREKGITI 121
Query: 197 WYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 376
YC+ + +ID PGH DF + D A+L++ + G I+
Sbjct: 122 QSAATYCTWK----DYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 377 NGQTREH 397
+ Q R +
Sbjct: 178 DRQMRRY 184
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 36.7 bits (81), Expect = 0.015
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKGSFKYAWVLDKLKA 187
N+ VI HVD GKST T L+ G I + + + A E +G + +
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80
Query: 188 EREWYHNRYCSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIV 337
+ + N + L LID+PGH DF + D A+++V
Sbjct: 81 MTDESLKSFTGARDGN-EYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 36.3 bits (80), Expect = 0.020
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Frame = +2
Query: 17 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 196
N +I H+D GKST L+ G + R +++ + ++ + + KL+A R
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKEQFLDNMDLE----RERGITIKLQAARM 143
Query: 197 WYHNRYCSLEVRN*QVLCY-LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 373
Y V C LID PGH DF + + + A+L+V A G EA
Sbjct: 144 RY--------VYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA--- 191
Query: 374 KNGQTREHALLAFTLGVKQLIVGVNKMD--STEPPYSEPRFEEI 499
QT + LA + ++I +NK+D EP EE+
Sbjct: 192 ---QTLANVYLALENNL-EIIPVLNKIDLPGAEPEKVLREIEEV 231
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH + M+ G + D A+L++AA QT EH + +K +I
Sbjct: 126 VDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHII 179
Query: 437 VGVNKMDSTEPPYSEPRFEEIKK 505
+ NK+D + + + E I+K
Sbjct: 180 ILQNKIDLIQENVAINQHEAIQK 202
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 230 RN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
R+ LC ++D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 230 RN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
R+ LC ++D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 5 KTHINIVVIGHVDSGKSTTTGHLIYKCG 88
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 248 CYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
C +D PGH F G D A+++VAA G QT E A+
Sbjct: 554 CVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAV 605
Query: 428 QLIVGVNKMD 457
+++ +NK+D
Sbjct: 606 PIVIAINKID 615
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 31.1 bits (67), Expect = 0.73
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 251 YLIDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
+ I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 224 FTIKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAE 283
Query: 428 QLIVGVNKMDSTE 466
+ +DS E
Sbjct: 284 LENLSTFTLDSDE 296
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 30.7 bits (66), Expect = 0.97
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 230 RN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
R+ LC ++D PG+ +F M AD AV IV A G
Sbjct: 191 RSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQG 231
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -3
Query: 430 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINEV 251
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNNTR 770
Query: 250 T*YLLVSN 227
T L++N
Sbjct: 771 TVQRLMTN 778
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+D PGH F + G + D VL+VAA G
Sbjct: 273 LDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 434 IVGVNKMD 457
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIV 337
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIV 337
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 592 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 690
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 28.7 bits (61), Expect = 3.9
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 560 VIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK-F 611
Query: 434 IVGVNKMD 457
I+ +NK+D
Sbjct: 612 IIALNKVD 619
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 528 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 629
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Frame = +2
Query: 521 SRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVKKAKLTENASLKLSM 688
SR + QLL S CP L G TCWS + R D W + A KLSM
Sbjct: 134 SRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQA--KLSM 191
Query: 689 P 691
P
Sbjct: 192 P 192
>At5g46380.1 68418.m05708 hypothetical protein
Length = 607
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Frame = -2
Query: 203 DTTHAQPLVCPIPKHI*RILYPFP-----GPPSRTSRW 105
D H +PLV P+P H R YP P GP +R+S +
Sbjct: 483 DAYHLRPLVAPLPLH--RDSYPCPPTLAAGPYTRSSAY 518
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 240 KYYVTSLMLLDTEISSRT*SQEPLRLIAL 326
KYY+ ++ LDTEIS + L++ AL
Sbjct: 684 KYYIENIKRLDTEISKLKLKSDSLKIAAL 712
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 240 KYYVTSLMLLDTEISSRT*SQEPLRLIAL 326
KYY+ ++ LDTEIS + L++ AL
Sbjct: 684 KYYIENIKRLDTEISKLKLKSDSLKIAAL 712
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,802,035
Number of Sequences: 28952
Number of extensions: 345632
Number of successful extensions: 1080
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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