Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00821
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 50 2e-06
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 49 3e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 48 6e-06
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 44 1e-04
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 42 3e-04
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 40 0.002
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 40 0.002
04_03_0920 + 20826876-20829293 31 0.74
12_01_0471 - 3672309-3672740,3673159-3673251,3673271-3673399,367... 29 2.3
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 29 3.0
04_03_0923 + 20843477-20845044,20846081-20846996 29 3.0
10_01_0167 + 1876793-1877402,1877423-1877642,1877760-1879534,188... 28 6.9
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773... 28 6.9
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 6.9
08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818 27 9.2
04_03_0459 + 16159015-16159771,16160251-16160365,16160478-161608... 27 9.2
04_01_0319 - 4291144-4293402 27 9.2
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Frame = +1
Query: 271 LKSELTGNLENVIVALMTPLPH---FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 441
+KSE +GN E ++ ++ + ++AK L ++ G+GTD+ +I ++ T + ++ I
Sbjct: 208 VKSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYI 267
Query: 442 SAFYEQLYGKSLESDLKGDTSGPSR 516
A Y + Y KSL + +TSG R
Sbjct: 268 KAEYYKKYKKSLAEAIHSETSGNYR 292
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 343 AKELHDA-VSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 507
AK+L+ A +GTDE+ I I S + ++++ Y +Y +SLE +K +TSG
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSG 214
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 343 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 507
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSG 130
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 138 LRKAMKGFGTDEKAIIDVLCSR 203
LRK+MKG GTD+ +I V+ +R
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTR 259
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Frame = +1
Query: 271 LKSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRT 438
+KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++
Sbjct: 251 VKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQY 309
Query: 439 ISAFYEQLYGKSLESDLKGDTSGPSR 516
I A Y + Y +SL + +TSG R
Sbjct: 310 IKAEYHRSYKRSLADAVHSETSGNYR 335
Score = 34.7 bits (76), Expect = 0.060
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +1
Query: 253 QDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 432
QDL+ L +EL+G+ + ++ + A LH A++G TD A E++C+ + +
Sbjct: 59 QDLLHRLAAELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQL 118
Query: 433 RTISAFYEQLYGKSLESDLKGDTS 504
+ Y +G L+ D +
Sbjct: 119 LVVRQAYLARFGGGGGGGLEHDVA 142
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 343 AKELHDAVSG-IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 480
A+EL+ A +GTDE I + S + ++A Y +Y +SLE
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLE 223
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/85 (29%), Positives = 45/85 (52%)
Frame = +1
Query: 253 QDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 432
+DL ++ K E L +I P ++ K + A++G+GTDE ++ I+ T + +
Sbjct: 220 KDLKADPKDEFLSTLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDL 278
Query: 433 RTISAFYEQLYGKSLESDLKGDTSG 507
+ I+ Y++ LE + GDTSG
Sbjct: 279 KLITEAYQKRNSVPLERAVAGDTSG 303
Score = 34.3 bits (75), Expect = 0.080
Identities = 20/59 (33%), Positives = 26/59 (44%)
Frame = +1
Query: 322 TPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGD 498
T L H AK LH+ + ++ II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKAD 225
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 138 LRKAMKGFGTDEKAIIDVLCSRGIVQASRSRR 233
LRKA +G+GT+E II +L R Q RR
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRR 51
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = +1
Query: 349 ELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 507
+L A G GT+E II IL R I Y YG+ L + + SG
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISG 71
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 253 QDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGI---GTDEEAIIEILCTLSN 423
++L+ + E++G+ E ++ L T P L + V+ G+ ++EI C
Sbjct: 59 EELLRSITDEISGDFERAVI-LWTLDPAERDAVLANEVARKWYPGSGSRVLVEIACARGP 117
Query: 424 YGIRTISAFYEQLYGKSLESDLKGDTSGPSR 516
+ + Y + + +SLE D+ +G R
Sbjct: 118 AQLFAVRQAYHERFKRSLEEDVAAHATGDFR 148
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +1
Query: 280 ELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQ 459
+L L+ + L +P HF A+ + ++ G+GTDEE + + + + + + Y+
Sbjct: 281 QLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKV 339
Query: 460 LYGKSLESDLKGDTSG 507
Y ++ +D++GDTSG
Sbjct: 340 RYNTTVTADVRGDTSG 355
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +1
Query: 295 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 474
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 475 LESDLKGDTSGPSR 516
L L + SG R
Sbjct: 107 LLDRLHSELSGDFR 120
Score = 32.3 bits (70), Expect = 0.32
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +3
Query: 135 TLRKAMKGFGTDEKAIIDVLCSRGIVQ 215
++RKA++G+GTDE A+I++L R Q
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQ 91
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 343 AKELHDAVSGIG--TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 495
A ELHDAV G G + ++ I+ T S + Y Q +GK ++ L G
Sbjct: 224 AAELHDAVVGRGQALHGDDVVRIVGTRSKAQLAVTLERYRQEHGKGIDEVLDG 276
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +1
Query: 253 QDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGI 432
+DL ++ K E G L +I P ++ K + A+ G+GTDE ++ I+ T + +
Sbjct: 145 KDLKADPKDEFLGTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDL 203
Query: 433 RTISAFYEQLYGKSLESDLKGDTSGPSRD 519
+ I Y++ LE + DT+ D
Sbjct: 204 KLIKEAYQKRNSVPLERAVAKDTTRDYED 232
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 138 LRKAMKGFGTDEKAIIDVLCSRGIVQASRSRR 233
LRKA KG+GT+EK II +L R Q RR
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRR 51
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 346 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 507
++L A G GT+E+ II IL R I Y + YG+ L L + G
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHG 71
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 259 LISELKSELTGNLENVIVALMTPLPHFYAKEL-HDAVSGIGTDEEAIIEILCTLSNYGIR 435
L+S+ S L+G++ + L P ++ DA+ G D + ++E++CT + +
Sbjct: 81 LVSKHISILSGSIAIRVACLRASEPCVRDADIARDALFGRRIDGDVLVEVVCTRPSGEVA 140
Query: 436 TISAFYEQLYGKSLESDLKGDTSG 507
I Y+ Y SLE D+ TSG
Sbjct: 141 LIRQAYQARYSASLERDVSSRTSG 164
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +1
Query: 295 LENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKS 474
+ ++V +TP P A L A G GTDE+A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 475 LESDLKGDTSG 507
L L+ + SG
Sbjct: 61 LIQRLQSELSG 71
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +3
Query: 138 LRKAMKGFGTDEKAIIDVLCSRGIVQASRSR 230
L KA +G+GTDE+A+I VL R Q + R
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIR 50
Score = 31.9 bits (69), Expect = 0.43
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 253 QDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 423
++LI L+SEL+G+LE + + A ++ A I D I+EI CT S+
Sbjct: 59 ENLIQRLQSELSGDLERAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
>04_03_0920 + 20826876-20829293
Length = 805
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 328 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 507
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>12_01_0471 -
3672309-3672740,3673159-3673251,3673271-3673399,
3673400-3673448,3674291-3674378,3674477-3674573,
3675195-3675278,3675377-3675464,3676589-3676715,
3676774-3676848,3676934-3677042,3677125-3677448,
3677863-3678039
Length = 623
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +1
Query: 262 ISELKSELTGNLENVIVALMTPLPHFY---AKELHDAVSGIGTDEEAIIEILCTLSNYGI 432
IS+L S+ ++++ + PL H + AKE HD + G+G+ + + + L + G
Sbjct: 159 ISDLNSQDKDPIKSIHFSNSNPLCHAFDPEAKEGHDLIIGMGSGDVYSMSLRQQLQDSGR 218
Query: 433 RTISAFYEQLYGKSLESD 486
+ ++A Q Y K + D
Sbjct: 219 KPVAA---QHYNKGVRYD 233
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 289 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQL- 462
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 463 YGKSL 477
YG+ +
Sbjct: 176 YGRGI 180
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/78 (24%), Positives = 33/78 (42%)
Frame = +1
Query: 274 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 453
+++ TG + LPH A+ + A S + + CT +YG S ++
Sbjct: 348 RTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVWH 406
Query: 454 EQLYGKSLESDLKGDTSG 507
++LY SD D +G
Sbjct: 407 DELYNVKQLSDSSSDGNG 424
>10_01_0167 +
1876793-1877402,1877423-1877642,1877760-1879534,
1880019-1880199,1881313-1881529
Length = 1000
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 352 LHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFY 453
L D +S T EE ++ LC LS+Y ++++ Y
Sbjct: 703 LSDKLSKCKTKEEMLLASLCKLSSYKLQSLHIIY 736
>06_03_0095 -
16575938-16576585,16577028-16577219,16577294-16577392,
16577496-16577618,16577717-16577929,16578143-16578251,
16578339-16578427,16578604-16578880,16578974-16579084,
16579160-16580508,16581218-16581631
Length = 1207
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 466 GKSLESDLKGDTSGPSRDCACRCAWPIAMKTXASMKAQLKPMLKH 600
GKSL L+ D D A +CA I ++ KA + ++KH
Sbjct: 817 GKSLTYALEDDVKFKFLDLALKCASVICCRSSPKQKALVTRLVKH 861
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -2
Query: 188 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 36
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 35 FNSD 24
F+ D
Sbjct: 200 FHQD 203
>08_02_1445 + 27149983-27150382,27151203-27151612,27151955-27152818
Length = 557
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 438 HIRILRTTVRQEPGIGLKRRHVGTFKRLCVSLCMANRDENXGI 566
H+ I+R+ + ++PGIGL+ T K+ +L MA++ +N I
Sbjct: 200 HVEIVRSLLSRDPGIGLR-----TDKKGQTALHMASKGQNAEI 237
>04_03_0459 +
16159015-16159771,16160251-16160365,16160478-16160844,
16160930-16161244,16161324-16161644,16161730-16161882
Length = 675
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = +3
Query: 357 RCCLRNWNRRRSHHRDPVHAFQLWYPYHIRILRTTVRQEPGIGLKRR 497
RC R W R P H QL P R+ T R E G G RR
Sbjct: 630 RCQYREWIDTRRVLTPPSHVVQLELPEQYRV--TKARFERGEGSSRR 674
>04_01_0319 - 4291144-4293402
Length = 752
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +1
Query: 484 DLKGDTSGPSRDCACRCAWPIAMKTXASMKAQLKPMLKHW 603
DL+ +S P C R W ++ KT ++K W
Sbjct: 595 DLESSSSSPRNICRLRDLWRVSPKTIEQQNKLAGMLIKQW 634
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,312,144
Number of Sequences: 37544
Number of extensions: 328664
Number of successful extensions: 986
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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