Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00819
(708 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 67 3e-10
UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus lu... 60 4e-08
UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease... 60 7e-08
UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole... 46 0.001
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 44 0.004
UniRef50_A7RMU4 Cluster: Predicted protein; n=1; Nematostella ve... 34 3.0
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 33 6.9
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 33 6.9
UniRef50_Q4T3P3 Cluster: Chromosome undetermined SCAF9969, whole... 33 9.1
UniRef50_A0FTT7 Cluster: Putative uncharacterized protein precur... 33 9.1
UniRef50_A7E4X4 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
>UniRef50_A7SUZ6 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 79
Score = 67.3 bits (157), Expect = 3e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +3
Query: 531 GKPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 629
GKPK L SGGSMVAKLKLKGIDGRAPPGVEPAA
Sbjct: 47 GKPKFLGSGGSMVAKLKLKGIDGRAPPGVEPAA 79
Score = 39.9 bits (89), Expect = 0.060
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +1
Query: 409 FHQSRTKVRGSKAIRYRPSSNRK 477
F RTKVRGSK IRYRPSSN K
Sbjct: 6 FRCQRTKVRGSKTIRYRPSSNHK 28
>UniRef50_A4S1P1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 72
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3
Query: 534 KPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 629
K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 41 KSKFLGSGGSMVARLKLKGIDGRAPPGVEPAA 72
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +1
Query: 409 FHQSRTKVRGSKAIRYRPSSNRK 477
FH RTKV GSK IRY PS N K
Sbjct: 6 FHCQRTKVGGSKMIRYHPSLNHK 28
>UniRef50_Q9AY32 Cluster: RRNA intron-encoded homing endonuclease;
n=4; Eukaryota|Rep: RRNA intron-encoded homing
endonuclease - Oryza sativa (Rice)
Length = 66
Score = 59.7 bits (138), Expect = 7e-08
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +3
Query: 534 KPKILDSGGSMVAKLKLKGIDGRAPPGVEPAA 629
K K L SGGSMVA+LKLKGIDGRAPPGVEPAA
Sbjct: 35 KSKSLGSGGSMVARLKLKGIDGRAPPGVEPAA 66
>UniRef50_Q4TH85 Cluster: Chromosome undetermined SCAF3131, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3131,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 36
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/36 (63%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +2
Query: 479 MSSSDPPTLLNGSA-GSFRETKDFGLRGEYGCKAET 583
M +SDP L + GS RETK FG RGEYGCKAET
Sbjct: 1 MPTSDPAALFPMTPPGSVRETKVFGFRGEYGCKAET 36
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 44.0 bits (99), Expect = 0.004
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 400 GKCFR*CSSCDDPRISPLTSQYECPQ 323
GKCFR C S ++ RISPLTS+Y+CPQ
Sbjct: 259 GKCFRSCLSPENLRISPLTSEYKCPQ 284
>UniRef50_A7RMU4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1264
Score = 34.3 bits (75), Expect = 3.0
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = -1
Query: 582 VSALQPYSPRSP-KSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSNRLRTSNFRS*LMKT 406
+S++ P PRS K +SRKLP +SN+ G++ + + +S R S L
Sbjct: 184 MSSVSPTVPRSASKQDISRKLPVSRYSNMSGTMSNF--EDSLEISRRSADGRPLSGLCTR 241
Query: 405 PLANAFADVRLATIQE 358
PL N +DV LA ++E
Sbjct: 242 PLINNNSDV-LARLKE 256
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 33.1 bits (72), Expect = 6.9
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 706 NQERAVNLSILPVSGPG 656
N+ERA+NLSIL VSGPG
Sbjct: 7 NRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 33.1 bits (72), Expect = 6.9
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 706 NQERAVNLSILPVSGPG 656
N+ERA+NLSIL VSGPG
Sbjct: 7 NRERAINLSILSVSGPG 23
>UniRef50_Q4T3P3 Cluster: Chromosome undetermined SCAF9969, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9969,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 677
Score = 32.7 bits (71), Expect = 9.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 404 GVFINQERKLEVRRRLDTALVLTVNMSSSDPPTLLNGSAGSFRETKDFGLRGEYGCK 574
G F++ R + A +L ++ + P +LN A + KD ++G Y CK
Sbjct: 113 GTFVSSNRTCRTELLVGAAPLLIHHIGGAKEPQMLNQPARLIKGEKDSDIKGNYSCK 169
>UniRef50_A0FTT7 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia phymatum STM815|Rep:
Putative uncharacterized protein precursor -
Burkholderia phymatum STM815
Length = 460
Score = 32.7 bits (71), Expect = 9.1
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = -2
Query: 308 HYLGVLKTNKIEPRSYSIFHARNIQAAFLARFEHSNLFKVILSAHLDTHRRAPR*DFD-- 135
H+ V++ ++ E R+++ H I LA FEH + A L H R P DF
Sbjct: 19 HFAHVVEQHRRELRAFACTHVDQIGDRLLAAFEHGIAQHFLRHAALRQHTR-PAQDFSRA 77
Query: 134 ----IEPAFFRTPAHRRYVRKRVSITADAVHR 51
I F R +R+RV+I V R
Sbjct: 78 QAAGIGECFEHRTLQHRQLRERVAIERSCVGR 109
>UniRef50_A7E4X4 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 1173
Score = 32.7 bits (71), Expect = 9.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -1
Query: 618 PLLVVPFRQFL*VSALQPYSPRSPKSL---VSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
P L++P F ++A P P + KS+ VS PA+ F+ +IF R + +N
Sbjct: 421 PSLIIPKNDFAFITASTPSRPATGKSISSQVSHMTPADDFARSAAERHEIFVQREASATN 480
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,726,487
Number of Sequences: 1657284
Number of extensions: 14845915
Number of successful extensions: 36209
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36188
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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