Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00819
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110611-1|AAI10612.1| 1262|Homo sapiens RASAL2 protein protein.       31   4.0  
AL499617-1|CAH72349.1| 1269|Homo sapiens RAS protein activator l...    31   4.0  
AL365357-2|CAI22693.1| 1139|Homo sapiens RAS protein activator l...    31   4.0  
AL365357-1|CAI22692.1| 1269|Homo sapiens RAS protein activator l...    31   4.0  
AL160281-1|CAH71462.1| 1269|Homo sapiens RAS protein activator l...    31   4.0  
AL035702-3|CAI21912.1| 1139|Homo sapiens RAS protein activator l...    31   4.0  
AL035702-1|CAI21910.1| 1269|Homo sapiens RAS protein activator l...    31   4.0  
AF047711-1|AAD04814.1| 1139|Homo sapiens nGAP protein.                 31   4.0  
AK124536-1|BAC85877.1|  170|Homo sapiens PTPRF), interacting pro...    30   7.1  

>BC110611-1|AAI10612.1| 1262|Homo sapiens RASAL2 protein protein.
          Length = 1262

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573  LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
            LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 899  LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 940


>AL499617-1|CAH72349.1| 1269|Homo sapiens RAS protein activator like 2
            protein.
          Length = 1269

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573  LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
            LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 906  LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 947


>AL365357-2|CAI22693.1| 1139|Homo sapiens RAS protein activator like
           2 protein.
          Length = 1139

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573 LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
           LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 776 LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 817


>AL365357-1|CAI22692.1| 1269|Homo sapiens RAS protein activator like 2
            protein.
          Length = 1269

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573  LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
            LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 906  LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 947


>AL160281-1|CAH71462.1| 1269|Homo sapiens RAS protein activator like 2
            protein.
          Length = 1269

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573  LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
            LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 906  LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 947


>AL035702-3|CAI21912.1| 1139|Homo sapiens RAS protein activator like
           2 protein.
          Length = 1139

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573 LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
           LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 776 LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 817


>AL035702-1|CAI21910.1| 1269|Homo sapiens RAS protein activator like 2
            protein.
          Length = 1269

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573  LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
            LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 906  LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 947


>AF047711-1|AAD04814.1| 1139|Homo sapiens nGAP protein.
          Length = 1139

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 27/42 (64%)
 Frame = -1

Query: 573 LQPYSPRSPKSLVSRKLPAEPFSNVGGSLDDIFTVRTRAVSN 448
           LQP S ++P   ++  +PA P +++  SL+++ T  +R+ SN
Sbjct: 776 LQPLSFQNPVYHLNNPIPAMPKASIDSSLENLSTASSRSQSN 817


>AK124536-1|BAC85877.1|  170|Homo sapiens PTPRF), interacting
           protein (liprin), alpha 2  protein.
          Length = 170

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -3

Query: 109 RLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNF 2
           RL    S  +++ PR++C+ +    CN+EL   +NF
Sbjct: 3   RLLFFKSQGLALLPRLKCSGAIIAHCNFELLGSSNF 38


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,494,674
Number of Sequences: 237096
Number of extensions: 2314832
Number of successful extensions: 4798
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4798
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)