Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00818
(732 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55BE6 Cluster: PREDICTED: similar to CG30424-PA... 40 0.083
UniRef50_A0CJX0 Cluster: Chromosome undetermined scaffold_2, who... 36 1.4
UniRef50_Q2VHM4 Cluster: Replication-associated protein RepX; n=... 34 3.1
UniRef50_Q7PDN3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 34 3.1
UniRef50_Q1ZH99 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A5K2A3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.5
UniRef50_A6LQ50 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_A7I7H2 Cluster: Putative uncharacterized protein precur... 33 7.2
UniRef50_Q8D5Q2 Cluster: ATPase component of ABC transporter wit... 33 9.5
UniRef50_A0WBU8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.5
UniRef50_Q6YRL3 Cluster: Chromosomal replication initiator prote... 33 9.5
>UniRef50_UPI0000D55BE6 Cluster: PREDICTED: similar to CG30424-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG30424-PA - Tribolium castaneum
Length = 398
Score = 39.5 bits (88), Expect = 0.083
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 554 KHNQTIFMNRKKRLKDRIRITKNIKG*AKMNLR*YYIKSIYCIILNNRDECFVSKIL 724
+ + + ++ K RLK +++ K +K N+ YYIK+++ I+ +D+ F +K L
Sbjct: 244 QEQERVLIDNKNRLKPAVKLIKKLKEKTHPNIASYYIKTVFLHIIEQKDQSFWNKSL 300
>UniRef50_A0CJX0 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_2, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2287
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -3
Query: 154 QSRLTKLESIPNNNEKKVICRNQNPYLLTQTMKHS 50
QSR + ++ IP +NEKK CRN P L HS
Sbjct: 1839 QSRFSYIKYIPQSNEKKKCCRNIKPQQLNHNQIHS 1873
>UniRef50_Q2VHM4 Cluster: Replication-associated protein RepX; n=3;
Lactococcus lactis|Rep: Replication-associated protein
RepX - Lactococcus lactis
Length = 192
Score = 34.3 bits (75), Expect = 3.1
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Frame = +1
Query: 451 IQTVVSKNKIYAIKIKMKIVLVITTPSI-----KNGLN*K--TQPNNFHEQKKKIERQNK 609
I +++KN I KIK KIVL + S+ KN + TQ N +Q+ + ++QN+
Sbjct: 22 ISRIINKNSIPTQKIKNKIVLEDNSVSLIRQYFKNETQQQNETQQQNETQQQNETQQQNE 81
Query: 610 NYEKYQRISQNELKMIL 660
++ ++ QNE IL
Sbjct: 82 KQQQNEKQQQNETVSIL 98
>UniRef50_Q7PDN3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=5;
Plasmodium (Vinckeia)|Rep: ERYTHROCYTE MEMBRANE PROTEIN
PFEMP3 - Plasmodium yoelii yoelii
Length = 1781
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 553 KTQPNNFHEQKKKIERQNKNYEKYQRISQN 642
++Q NF QK KI ++NK Y+ YQ I+Q+
Sbjct: 1725 RSQNKNFLPQKNKINKKNKFYQSYQTINQS 1754
>UniRef50_Q1ZH99 Cluster: Putative uncharacterized protein; n=1;
Psychromonas sp. CNPT3|Rep: Putative uncharacterized
protein - Psychromonas sp. CNPT3
Length = 130
Score = 33.5 bits (73), Expect = 5.5
Identities = 19/76 (25%), Positives = 40/76 (52%)
Frame = +1
Query: 436 MQSHLIQTVVSKNKIYAIKIKMKIVLVITTPSIKNGLN*KTQPNNFHEQKKKIERQNKNY 615
+QS L+ V + +IK+ ++ +I S N N N F E+K+K + +NK+
Sbjct: 24 LQSELLHIVKQGGSEFIAEIKIPLLPII---SWFNDTNNTLDSNTFQEKKQKTKNKNKDP 80
Query: 616 EKYQRISQNELKMILY 663
+K ++ ++ L ++ +
Sbjct: 81 KKTKKENEKRLNIVTF 96
>UniRef50_A5K2A3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1847
Score = 33.5 bits (73), Expect = 5.5
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 553 KTQPNNFHEQKKKIERQNKNYEKYQRISQNELKM 654
++Q NF +K KI ++NK Y+ YQ I+Q+ L +
Sbjct: 1787 RSQNKNFLPKKNKINKKNKFYQSYQSINQSFLSI 1820
>UniRef50_A6LQ50 Cluster: Putative uncharacterized protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Putative
uncharacterized protein - Clostridium beijerinckii NCIMB
8052
Length = 869
Score = 33.1 bits (72), Expect = 7.2
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 496 KMKIVLVITTPSIKNGLN*KTQPNNF---HEQKKKIERQNKNYEKYQRISQNELKMILY* 666
++KIV I +I + N ++P + + K +E N+N E + I+ NE+K+ILY
Sbjct: 393 ELKIVYTIIN-NITSSFNLISKPKELLGRYNEDKFLELLNRNLENLKNINDNEIKLILYY 451
Query: 667 K 669
K
Sbjct: 452 K 452
>UniRef50_A7I7H2 Cluster: Putative uncharacterized protein
precursor; n=1; Candidatus Methanoregula boonei 6A8|Rep:
Putative uncharacterized protein precursor -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 33.1 bits (72), Expect = 7.2
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +1
Query: 397 IIYLSVWICLYCAMQSHLIQTVVSKNKIYAIKIKMKIVLVITTPSIKNGLN*KTQPNNFH 576
+I SV++ +MQSHL+ TVV I + + + ++T ++KN P
Sbjct: 125 VILFSVFLIYVPSMQSHLVMTVVG-----TIALVLGLFAILTGITVKNSEELPPSPRTLI 179
Query: 577 EQKKKIERQNKNYEK 621
+ KI NK EK
Sbjct: 180 LSRIKINPANKPEEK 194
>UniRef50_Q8D5Q2 Cluster: ATPase component of ABC transporter with
duplicated ATPase domains; n=2; Vibrio vulnificus|Rep:
ATPase component of ABC transporter with duplicated
ATPase domains - Vibrio vulnificus
Length = 522
Score = 32.7 bits (71), Expect = 9.5
Identities = 14/51 (27%), Positives = 33/51 (64%)
Frame = -3
Query: 205 GVKLMAKDSVLNATLKVQSRLTKLESIPNNNEKKVICRNQNPYLLTQTMKH 53
G+K A++S +A +KVQ++L + + + +N ++K++ + L++T +H
Sbjct: 283 GMKNSAENSRASANIKVQNQLKRNQHLQHNLKQKLVLEEEPKLYLSETHEH 333
>UniRef50_A0WBU8 Cluster: Putative uncharacterized protein; n=1;
Geobacter lovleyi SZ|Rep: Putative uncharacterized
protein - Geobacter lovleyi SZ
Length = 242
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -3
Query: 376 ALAIRLKTIKKYYSQHLHNCASNA*FKIIQVIFTGTLPS 260
AL + +KT++KY+S N A +A +IQ + + TLP+
Sbjct: 71 ALKLNIKTVQKYFSLLRDNLAKHARLNLIQQLGSDTLPT 109
>UniRef50_Q6YRL3 Cluster: Chromosomal replication initiator protein
dnaA; n=2; Candidatus Phytoplasma asteris|Rep:
Chromosomal replication initiator protein dnaA - Onion
yellows phytoplasma
Length = 507
Score = 32.7 bits (71), Expect = 9.5
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +1
Query: 475 KIYAIKIKMKIVLVITTPSIKNGLN*KTQPNNFHEQKKKIERQNKNYEKYQRISQNE 645
KI +K + KI++ + K N + +F K+K+E +N+ Y + +I NE
Sbjct: 64 KITKLKFEEKIIIEFVSEKNKKNSNFDDEKKHFENLKEKLENENQTY--FSKIENNE 118
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,651,604
Number of Sequences: 1657284
Number of extensions: 10575120
Number of successful extensions: 30746
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30673
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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