Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00818
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   1.1  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   1.1  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   1.9  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   1.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +1

Query: 391 YYIIYLSVWICLYCAMQSHLIQTVVSKNKIYAIKIKMKI 507
           +++IY +      C +Q H+  TV+S    + + + ++I
Sbjct: 141 FHLIYEAHGFSYKCGIQYHICNTVISATVCFMMLLMLEI 179


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/39 (23%), Positives = 21/39 (53%)
 Frame = +1

Query: 391 YYIIYLSVWICLYCAMQSHLIQTVVSKNKIYAIKIKMKI 507
           +++IY +      C +Q H+  TV+S    + + + ++I
Sbjct: 137 FHLIYEAHGFSYKCGIQYHICNTVISATVCFMMLLMLEI 175


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 29  IVFVDYYRMFHGLC*QIRVLVSANYFFFVIIR 124
           I+ +++Y+ F     Q+ VL   N+ FFV+++
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVK 170


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +2

Query: 29  IVFVDYYRMFHGLC*QIRVLVSANYFFFVIIR 124
           I+ +++Y+ F     Q+ VL   N+ FFV+++
Sbjct: 139 IMGLEFYKQFAIEYFQMYVLFFVNFAFFVVVK 170


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 553 KTQPNNFHEQKKKIERQNKNYEKYQRISQNE 645
           K +PN + E + K + + +  +KY ++ + E
Sbjct: 92  KNKPNWWQELEAKFDPKGEYKQKYNKLLEKE 122


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 430  CAMQSHLIQTVVSKNKIYAIKI 495
            C++  HL + + S N+IY + +
Sbjct: 1305 CSLHHHLSKLIKSFNEIYGVPL 1326


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,068
Number of Sequences: 336
Number of extensions: 3135
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)