BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00818 (732 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0496 + 19704429-19704613,19705874-19706736,19706764-197069... 29 2.9 01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201... 28 6.6 01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 28 6.6 >12_02_0496 + 19704429-19704613,19705874-19706736,19706764-19706951, 19707190-19708200 Length = 748 Score = 29.5 bits (63), Expect = 2.9 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 164 CCVQNAILRHQFDTKNEIKPFKILISNYCRV 256 C VQ +L+H+ + I+PF LI +CR+ Sbjct: 397 CLVQPVLLKHKQRSTRVIRPFFPLIFRWCRI 427 >01_07_0254 + 42318181-42319471,42319581-42319792,42319909-42320132, 42320232-42321009 Length = 834 Score = 28.3 bits (60), Expect = 6.6 Identities = 12/32 (37%), Positives = 20/32 (62%) Frame = +1 Query: 553 KTQPNNFHEQKKKIERQNKNYEKYQRISQNEL 648 KTQ H QK+K + +++Y K +++ Q EL Sbjct: 716 KTQEKE-HRQKRKADHASRDYNKRRKVLQREL 746 >01_04_0008 + 15041682-15041909,15042035-15042319,15042406-15042723, 15044087-15044128,15045111-15045391,15045808-15045883, 15046196-15046296,15047971-15048088,15048872-15049186 Length = 587 Score = 28.3 bits (60), Expect = 6.6 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = -1 Query: 558 CFLVQAIFDRWRCYNKNNLHFDFYGINFIFTDN 460 C++ Q + C+N N LH D G N + +N Sbjct: 174 CYVQQLLSGLEHCHNNNVLHRDIKGSNLLLDNN 206 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,218,521 Number of Sequences: 37544 Number of extensions: 235609 Number of successful extensions: 460 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 457 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 460 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1921741964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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