Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00818
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    24   5.6  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    23   9.7  

>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 350 YSFKANSKCHL*EDIILYIFLFGFAYIVQCNLI 448
           Y+ K   K  + +  +LYI L G    V C L+
Sbjct: 15  YTHKTPKKLKIVDAYLLYILLTGIMQFVYCCLV 47


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 243 ITVALREGRVPVNITCIILNYAFDAQL 323
           I  ALR  RVP  +  II +Y  D +L
Sbjct: 583 IATALRTKRVPAGLQRIIHSYFQDREL 609


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,995
Number of Sequences: 2352
Number of extensions: 11854
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)