Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00818
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p...    30   1.5  
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.      30   1.5  
Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical ...    28   7.8  

>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
            protein C47D12.1c protein.
          Length = 4053

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 176  NAILRHQFDTKNEIKPFKILISNYCRVERRKSPC--KYYLYNFK 301
            +AI +H F +   ++ F I + ++C V  R +P   K+Y Y FK
Sbjct: 1272 SAISKHYFHSNERVREFAIGLMDHCMVHSRLAPSLDKFY-YRFK 1314


>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
            C47D12.1b protein.
          Length = 4061

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 176  NAILRHQFDTKNEIKPFKILISNYCRVERRKSPC--KYYLYNFK 301
            +AI +H F +   ++ F I + ++C V  R +P   K+Y Y FK
Sbjct: 1278 SAISKHYFHSNERVREFAIGLMDHCMVHSRLAPSLDKFY-YRFK 1320


>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
            C47D12.1a protein.
          Length = 4064

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 176  NAILRHQFDTKNEIKPFKILISNYCRVERRKSPC--KYYLYNFK 301
            +AI +H F +   ++ F I + ++C V  R +P   K+Y Y FK
Sbjct: 1278 SAISKHYFHSNERVREFAIGLMDHCMVHSRLAPSLDKFY-YRFK 1320


>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
          Length = 4064

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 176  NAILRHQFDTKNEIKPFKILISNYCRVERRKSPC--KYYLYNFK 301
            +AI +H F +   ++ F I + ++C V  R +P   K+Y Y FK
Sbjct: 1278 SAISKHYFHSNERVREFAIGLMDHCMVHSRLAPSLDKFY-YRFK 1320


>Z83230-1|CAB05741.1| 1049|Caenorhabditis elegans Hypothetical
           protein F56A8.1 protein.
          Length = 1049

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +1

Query: 427 YCAMQSHLIQTVVSKNKIYAIKIKMKIVLVITTPSIKNGLN*K 555
           YC +Q+ LI  +V +N ++ +K  +  V+     SIK  L  K
Sbjct: 693 YCTVQNRLIIVIVFQNLVFGLKYLLSSVIPSIPASIKLALRKK 735


>AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical
           protein Y54G11A.2 protein.
          Length = 210

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = +1

Query: 577 EQKKKIERQNKNYEKYQRISQNELKMI 657
           ++ KK+E++ K+ EK + ++QNE K I
Sbjct: 156 QKLKKLEQERKDREKKEMLAQNEKKRI 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,031,512
Number of Sequences: 27780
Number of extensions: 269979
Number of successful extensions: 683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)