Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00817
         (795 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.7  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   3.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.9  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   6.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   6.5  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   8.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   8.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 46  YRVFTEHLTFNIHLKFYLKTSRHLTKLSFF 135
           Y  +   +TFN+HL F L +      L F+
Sbjct: 57  YYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
 Frame = +3

Query: 381 ENLKNVLPYSYY-FYSGP 431
           EN KN+ PY+Y  F  GP
Sbjct: 417 ENKKNLTPYTYLPFGEGP 434


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 270 KNKKERYEAISTYLLKSEHNIVCLQEVWSEKDYLYL 377
           K   ++Y   S+  LK   NI+ L ++W  + YL +
Sbjct: 179 KGLGKQYNIASSKTLKLSINIISLVQLWIFQLYLLI 214


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 362 RLPIFKGEPKECTPIFLLLLQW 427
           R+ +    PK+C P+  L+  W
Sbjct: 483 RICVSAWNPKDCDPLITLIETW 504


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 741 LHVIWIKKRWQLGYYLIRQIP 679
           L+  W KK  Q+ Y+LI   P
Sbjct: 149 LYSTWSKKSKQVEYFLIHWYP 169


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 741 LHVIWIKKRWQLGYYLIRQIP 679
           L+  W KK  Q+ Y+LI   P
Sbjct: 149 LYSTWSKKSKQVEYFLIHWYP 169


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 319 LFNKYVDIASYLSFLFLDTTGI 254
           +FN Y+D    L F   D +GI
Sbjct: 16  VFNNYMDENQALGFKISDNSGI 37


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 319 LFNKYVDIASYLSFLFLDTTGI 254
           +FN Y+D    L F   D +GI
Sbjct: 36  VFNNYMDENQALGFKISDNSGI 57


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,716
Number of Sequences: 336
Number of extensions: 4656
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)