Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00817
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    26   1.2  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   4.7  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    24   6.2  

>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -2

Query: 776 RCFSYKGLVPSNFMLYGSRRDGSWDII 696
           R  S +GL P +F  YGSRR G+ DI+
Sbjct: 104 RFLSDRGLTPRDFNSYGSRR-GNDDIM 129


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 354 SEKDYLYLKENLKNVLPYSYYFYSGP*M---GTYTKYIMVTG 470
           ++K  L  + ++K  LP+ +YFY    +    TY K+++  G
Sbjct: 521 ADKAVLSERPDVKIFLPFRFYFYRVEELFTPNTYNKFLVAPG 562


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 487 GSLSDQVWERLINVYCTHLHAEYHEDDMYLAHRVL 591
           G+ SD++ +  +N+Y   L AE +  D +L   +L
Sbjct: 275 GAKSDELRKVALNIYNNELCAERYRYDRHLRQGIL 309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,237
Number of Sequences: 2352
Number of extensions: 18149
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)